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The map label for this gene is fecI [C]

Identifier: 186476778

GI number: 186476778

Start: 2275810

End: 2276373

Strand: Direct

Name: fecI [C]

Synonym: Bphy_2023

Alternate gene names: 186476778

Gene position: 2275810-2276373 (Clockwise)

Preceding gene: 186476771

Following gene: 186476779

Centisome position: 65.41

GC content: 58.87

Gene sequence:

>564_bases
ATGGCATCAGACAAGGAACTCGCCGATTTTCTGGCGGGCGTCGAAAGGCGCGCGTTCAAGCAGACGGTCTACGCCGTGCG
GGACGACGACGCGTCGCTCGACATCGTGCAGGACGCGATGATCAAGCTCGCCGAAAAATACGGCGATCGTCCGGCTGCTG
AGCTGCCGCTTTTGTTTCAGCGTATTCTCCAGAATGCGATGCACGACTATTTCCGTCGGCAGAAGGTGCGCAACACCTGG
GTAAGCCTGTTTTCGTCGCTGGGCAATGCCGACGACGAAGACTTCGACCCGCTGGAGACGTTCGAAAGCCAGGACGGCTC
GACGGGCGTGGAAAGCAGCGAGCAGCAGCTCGAGCGCGAACAGGTTCTGCAGCTGATCGACGACGAAATCCAAAAATTGC
CGGCACGTCAACGGGAGGCGTTTCTGATGCGTTACTGGGAAGATATGGATGTCGCTGAGACTGCTGCTGCGATGGGCTGC
TCGGAAGGCAGTGTGAAAACGCACTGTTCGCGAGCCACGCACACGCTGGCGCAAGCGCTCAAGGCCAAAGGAATCACGCT
ATGA

Upstream 100 bases:

>100_bases
CGTTTTTCCCCGGATCGGGTGAAAGTTTGTTAGCATCCGCGGGTTTTACGACATTTTTCGACCGATTCCGCGCACATTCG
CTGCGCCGACCCCCAAACGG

Downstream 100 bases:

>100_bases
GCTCCGCTCTCGAAACAAAAGAACTCGAGTTTGCGCGGCAGCTGCGCCGAGCACTCGACGAAAACGCTGCCCGCATTCCA
CCCGCTACGACCGACCGGCT

Product: RNA polymerase factor sigma-70

Products: NA

Alternate protein names: RNA Polymerase Sigma-24 Subunit ECF Subfamily; ECF Subfamily RNA Polymerase Sigma-24 Factor; Sigma-; RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor Transcription Regulator Protein; RNA Polymerase Sigma-E Factor; RNA Polymerase Sigma-70 Factor; Specialized Sigma Subunits Of RNA Polymerase; ECF Subfamily RNA Polymerase Sigma Factor

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MASDKELADFLAGVERRAFKQTVYAVRDDDASLDIVQDAMIKLAEKYGDRPAAELPLLFQRILQNAMHDYFRRQKVRNTW
VSLFSSLGNADDEDFDPLETFESQDGSTGVESSEQQLEREQVLQLIDDEIQKLPARQREAFLMRYWEDMDVAETAAAMGC
SEGSVKTHCSRATHTLAQALKAKGITL

Sequences:

>Translated_187_residues
MASDKELADFLAGVERRAFKQTVYAVRDDDASLDIVQDAMIKLAEKYGDRPAAELPLLFQRILQNAMHDYFRRQKVRNTW
VSLFSSLGNADDEDFDPLETFESQDGSTGVESSEQQLEREQVLQLIDDEIQKLPARQREAFLMRYWEDMDVAETAAAMGC
SEGSVKTHCSRATHTLAQALKAKGITL
>Mature_186_residues
ASDKELADFLAGVERRAFKQTVYAVRDDDASLDIVQDAMIKLAEKYGDRPAAELPLLFQRILQNAMHDYFRRQKVRNTWV
SLFSSLGNADDEDFDPLETFESQDGSTGVESSEQQLEREQVLQLIDDEIQKLPARQREAFLMRYWEDMDVAETAAAMGCS
EGSVKTHCSRATHTLAQALKAKGITL

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21139; Mature: 21008

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASDKELADFLAGVERRAFKQTVYAVRDDDASLDIVQDAMIKLAEKYGDRPAAELPLLFQ
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
RILQNAMHDYFRRQKVRNTWVSLFSSLGNADDEDFDPLETFESQDGSTGVESSEQQLERE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHH
QVLQLIDDEIQKLPARQREAFLMRYWEDMDVAETAAAMGCSEGSVKTHCSRATHTLAQAL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KAKGITL
HHCCCCC
>Mature Secondary Structure 
ASDKELADFLAGVERRAFKQTVYAVRDDDASLDIVQDAMIKLAEKYGDRPAAELPLLFQ
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
RILQNAMHDYFRRQKVRNTWVSLFSSLGNADDEDFDPLETFESQDGSTGVESSEQQLERE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHH
QVLQLIDDEIQKLPARQREAFLMRYWEDMDVAETAAAMGCSEGSVKTHCSRATHTLAQAL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KAKGITL
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA