Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010622 |
Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is 186475999
Identifier: 186475999
GI number: 186475999
Start: 1392906
End: 1393184
Strand: Reverse
Name: 186475999
Synonym: Bphy_1240
Alternate gene names: NA
Gene position: 1393184-1392906 (Counterclockwise)
Preceding gene: 186476000
Following gene: 186475998
Centisome position: 40.04
GC content: 63.08
Gene sequence:
>279_bases GTGGCCGTGTGCCTGCGCCGCGAGCGCACCGACAGCGTCATCGTGCGTTTCCGCGATGCCCTCGTCTATCGCGACGGCGA ACGGGTAGCGGACATCACGAACGGCGAGCACATCGTCTTTTGGCTTGTGCCCGGCACGCATCGCATCGGCGTATCGACGC AGTTCGATCCCGTCGTCGAGATCGACTTCATCGTCACGTCCGATCCCCGCTACTCGAATCGCGCAAGCGTGTCGTTCAAC GACGATCATCGCATCGTGTTGCGGCGCGTCGCCAGTTGA
Upstream 100 bases:
>100_bases CGCCGCGTGCGCTTTCACACCTGCCGGGAAGGCGCCGTTCAGGGAGGTTTCCGCCGAGCGAATCGTCAAACCAGCCGATA CGCAGCGCGGCGAAGACAAG
Downstream 100 bases:
>100_bases CGGAACGGAGCGGCCACGCTGGCTGCGTCGTTCACAATTCGACACAGCGAGGCGGCCCAACTCCACGTAACATCTTGACA CCGCGCGCTGCGCGGCTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MAVCLRRERTDSVIVRFRDALVYRDGERVADITNGEHIVFWLVPGTHRIGVSTQFDPVVEIDFIVTSDPRYSNRASVSFN DDHRIVLRRVAS
Sequences:
>Translated_92_residues MAVCLRRERTDSVIVRFRDALVYRDGERVADITNGEHIVFWLVPGTHRIGVSTQFDPVVEIDFIVTSDPRYSNRASVSFN DDHRIVLRRVAS >Mature_91_residues AVCLRRERTDSVIVRFRDALVYRDGERVADITNGEHIVFWLVPGTHRIGVSTQFDPVVEIDFIVTSDPRYSNRASVSFND DHRIVLRRVAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10588; Mature: 10457
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVCLRRERTDSVIVRFRDALVYRDGERVADITNGEHIVFWLVPGTHRIGVSTQFDPVVE CEEEECCCCCCEEEEEEEEEEEEECCCEEEEECCCCEEEEEEECCCEEECCCCCCCCEEE IDFIVTSDPRYSNRASVSFNDDHRIVLRRVAS EEEEEECCCCCCCEEEEEECCCCEEEEEEECC >Mature Secondary Structure AVCLRRERTDSVIVRFRDALVYRDGERVADITNGEHIVFWLVPGTHRIGVSTQFDPVVE EEEECCCCCCEEEEEEEEEEEEECCCEEEEECCCCEEEEEEECCCEEECCCCCCCCEEE IDFIVTSDPRYSNRASVSFNDDHRIVLRRVAS EEEEEECCCCCCCEEEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA