Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is yeaH [C]
Identifier: 186475987
GI number: 186475987
Start: 1377127
End: 1378398
Strand: Reverse
Name: yeaH [C]
Synonym: Bphy_1228
Alternate gene names: 186475987
Gene position: 1378398-1377127 (Counterclockwise)
Preceding gene: 186475988
Following gene: 186475986
Centisome position: 39.62
GC content: 58.96
Gene sequence:
>1272_bases GTGCTTCATCAAATCATCGACCGCAGGCTGGCAGGCAAGAACAAGAGCATTGCAAATCGCGAACGCTTTCTGCGTCGCGT GAAGGGCTATATCCGGCGCGCGGTGTCAGAAGCGGTGCGCGACCGCAGCATCAAGGACATTCAAAACACCCAAAGCATCA CGATTCCGCGCAAGGACATCGCCGAACCGTCGTTCCGGCATGGTCCCGGCGGCAAGCGCGAAATGGTGCATCCGGGTAAC GCCGATTACATACGCGGCGACAAGATTCCGCGCCCGCAAGGGGGCGGCGGCAGTGGCGGTGGTGGCAGCGCCAGCAACGA AGGCGAAGGGCAGGACGATTTCGTTTTCGAACTCAGCCGCGAAGAATTCATGCAGTACTTCTTCGACGACCTCGAATTGC CGCGTCTCGTCAAAACCCATCTGCTGGCCGTGCCGACGTGGAAAAGTATCCGCGCGGGCTGGGCTGCCGAAGGTACGCCG AACAACATTGACGTGGTGCGCTCGCTGCGCAGCGCGCTGGGCCGGCGCATCGCGCTCGGTGCGCCGCTCGTCAACGAACT GCACGAACTCGAGAAACAGCTCGAAGAGATGAAGGCGGACCCCGCCGATCGCCGCGACGAGATCAAGCTGCTCGAAGAAG ACATTCACCATCTGCGCGGCCGCATCTGGCGCATTCCGTTCATCGATCCGTTCGATCTGCGCTACGTGAACCGCGTGAAG CAGCCACAGCCGTCCAGTCAGGCCGTGATGTTTTGTCTGATGGATGTATCGGGTTCAATGGATGAGCAGCGCAAGGATCT CGCCAAGCGCTTCTTCATCCTGCTGTATCTGTTTCTCAAGCGTAACTACGAGAAGATCGAAGTGGTCTTCATCCGTCACC ATACGCGCGCCGAGGAAGTCGACGAAGACACGTTCTTCCATTCCACGGAAAGCGGCGGCACGGTGGTGTCGAGCGCGCTC GAGCTGATGCAGAAGATTCTCGACGAACGCTACTCGCCGACTGAATGGAACATTTACGGCGCGCAGGCCTCGGACGGCGA CAACTGGACCGACGATTCGCCGAAATGCCGCAAGATCCTCGCAGATGACATTCTCGAGAAGGTGCGGTATTTTGCGTACA TTCAGGTGACGCCTGAAGAGCAGAACCTGTGGCTCGAATATGCGCAACTCGCGCTGTCGCAGCCGCACATGGCGATGAAG AAGGTCGAAACGGCTGCGGATATCTATCCGGTGTTCCGCGAGCTGTTCGAAAAACAGGTGGAAGCGGCATGA
Upstream 100 bases:
>100_bases CGATTTGCGCGGGCTTCCTGCGAGGCGCAAGCCGCATGGACATAACATTGCATGCGCAACTTGCGCCCCGCGTATTCCCA ATCGGAGCGGGAGACTGGAT
Downstream 100 bases:
>100_bases CGACACGCCACCTGCACAACGAGGCGCGAGGGTACGAGCCCGAGCGTCGTAAAGGCGTGCCGAAGCAGAGTGAGGCCGGG CATGCCGAGGCGAATACGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MLHQIIDRRLAGKNKSIANRERFLRRVKGYIRRAVSEAVRDRSIKDIQNTQSITIPRKDIAEPSFRHGPGGKREMVHPGN ADYIRGDKIPRPQGGGGSGGGGSASNEGEGQDDFVFELSREEFMQYFFDDLELPRLVKTHLLAVPTWKSIRAGWAAEGTP NNIDVVRSLRSALGRRIALGAPLVNELHELEKQLEEMKADPADRRDEIKLLEEDIHHLRGRIWRIPFIDPFDLRYVNRVK QPQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYEKIEVVFIRHHTRAEEVDEDTFFHSTESGGTVVSSAL ELMQKILDERYSPTEWNIYGAQASDGDNWTDDSPKCRKILADDILEKVRYFAYIQVTPEEQNLWLEYAQLALSQPHMAMK KVETAADIYPVFRELFEKQVEAA
Sequences:
>Translated_423_residues MLHQIIDRRLAGKNKSIANRERFLRRVKGYIRRAVSEAVRDRSIKDIQNTQSITIPRKDIAEPSFRHGPGGKREMVHPGN ADYIRGDKIPRPQGGGGSGGGGSASNEGEGQDDFVFELSREEFMQYFFDDLELPRLVKTHLLAVPTWKSIRAGWAAEGTP NNIDVVRSLRSALGRRIALGAPLVNELHELEKQLEEMKADPADRRDEIKLLEEDIHHLRGRIWRIPFIDPFDLRYVNRVK QPQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYEKIEVVFIRHHTRAEEVDEDTFFHSTESGGTVVSSAL ELMQKILDERYSPTEWNIYGAQASDGDNWTDDSPKCRKILADDILEKVRYFAYIQVTPEEQNLWLEYAQLALSQPHMAMK KVETAADIYPVFRELFEKQVEAA >Mature_423_residues MLHQIIDRRLAGKNKSIANRERFLRRVKGYIRRAVSEAVRDRSIKDIQNTQSITIPRKDIAEPSFRHGPGGKREMVHPGN ADYIRGDKIPRPQGGGGSGGGGSASNEGEGQDDFVFELSREEFMQYFFDDLELPRLVKTHLLAVPTWKSIRAGWAAEGTP NNIDVVRSLRSALGRRIALGAPLVNELHELEKQLEEMKADPADRRDEIKLLEEDIHHLRGRIWRIPFIDPFDLRYVNRVK QPQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYEKIEVVFIRHHTRAEEVDEDTFFHSTESGGTVVSSAL ELMQKILDERYSPTEWNIYGAQASDGDNWTDDSPKCRKILADDILEKVRYFAYIQVTPEEQNLWLEYAQLALSQPHMAMK KVETAADIYPVFRELFEKQVEAA
Specific function: Unknown
COG id: COG2718
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0229 family [H]
Homologues:
Organism=Escherichia coli, GI1788084, Length=423, Percent_Identity=54.1371158392435, Blast_Score=451, Evalue=1e-128,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006698 [H]
Pfam domain/function: PF04285 DUF444 [H]
EC number: NA
Molecular weight: Translated: 48660; Mature: 48660
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHQIIDRRLAGKNKSIANRERFLRRVKGYIRRAVSEAVRDRSIKDIQNTQSITIPRKDI CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCEECCHHHC AEPSFRHGPGGKREMVHPGNADYIRGDKIPRPQGGGGSGGGGSASNEGEGQDDFVFELSR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEHHH EEFMQYFFDDLELPRLVKTHLLAVPTWKSIRAGWAAEGTPNNIDVVRSLRSALGRRIALG HHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHCC APLVNELHELEKQLEEMKADPADRRDEIKLLEEDIHHLRGRIWRIPFIDPFDLRYVNRVK CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHC QPQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYEKIEVVFIRHHTRAEEV CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHC DEDTFFHSTESGGTVVSSALELMQKILDERYSPTEWNIYGAQASDGDNWTDDSPKCRKIL CCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHH ADDILEKVRYFAYIQVTPEEQNLWLEYAQLALSQPHMAMKKVETAADIYPVFRELFEKQV HHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH EAA CCC >Mature Secondary Structure MLHQIIDRRLAGKNKSIANRERFLRRVKGYIRRAVSEAVRDRSIKDIQNTQSITIPRKDI CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCEECCHHHC AEPSFRHGPGGKREMVHPGNADYIRGDKIPRPQGGGGSGGGGSASNEGEGQDDFVFELSR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEHHH EEFMQYFFDDLELPRLVKTHLLAVPTWKSIRAGWAAEGTPNNIDVVRSLRSALGRRIALG HHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHCC APLVNELHELEKQLEEMKADPADRRDEIKLLEEDIHHLRGRIWRIPFIDPFDLRYVNRVK CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHC QPQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYEKIEVVFIRHHTRAEEV CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHC DEDTFFHSTESGGTVVSSALELMQKILDERYSPTEWNIYGAQASDGDNWTDDSPKCRKIL CCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHH ADDILEKVRYFAYIQVTPEEQNLWLEYAQLALSQPHMAMKKVETAADIYPVFRELFEKQV HHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH EAA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA