| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222786
Identifier: 183222786
GI number: 183222786
Start: 3565580
End: 3566185
Strand: Direct
Name: 183222786
Synonym: LEPBI_I3446
Alternate gene names: NA
Gene position: 3565580-3566185 (Clockwise)
Preceding gene: 183222785
Following gene: 183222787
Centisome position: 99.05
GC content: 36.8
Gene sequence:
>606_bases TTGAATCTAAACTCAAAGAATTTCATTCGAAAAAAAATACCAAACATAATAAATCTCTCGATTCTCTCGCAGAGAAAATT CGGAAAAAAGAAGAACAGATTGAAAAACTGTATGATGATATCATCCTCTTACAAAATAAACTTTCCAATCTTTTGGACAA AGAACTCCAAAAGTAATCCACGACACCAAACTCTTTTAGTGAACCTGCAATTTATTTCCAAAATCAAATCCATTTCGAAA GAAAAGTTTTTTCTGATCCATTCTGTTCAAAAACCTCACCTTGATCGATTCCATTCCCGATTGGTTCGTAAGGTTTGCCT TTTTATCTTACCCTTTGTTTTCCTACAATGTGCAAGTTCAGGATTTGGAACCCAAGGGTTACTTTATGAAAACCAAAGGA TTTCACTCATGGAAACCGGAAACTCTGCGACTAAGGAAGGGTTTTCCTGTGCGAAATCCTATCTTGGACTCATTGCCTTG GGAGATGCCTCCATCGAGACGGCCCAAAAGCAAGGAAACATCAAAGAAATTACGTCCATTGAATTAGAAACTTATAATTT CCTCGGGATTTACGCAAAACTATGTACGGTAACCAAGGGGATTTAG
Upstream 100 bases:
>100_bases CCAAGAATTGTGTCTTCGGATCACTGGTATATGAAACAAAACATCGATTCACTGAAGGAGTTTTCTAAAGAATTAAAGAG TGGTTTGATTTATGAGGAAA
Downstream 100 bases:
>100_bases TCGAAACTAAGTACAGAGCCAATGGTCATGTGGAAAAAAATCAGAATCCTATTCGTTTTTGTTTTGCTGACCTTTCAATG TGTTCCCAAACCTTCTCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MNLNSKNFIRKKIPNIINLSILSQRKFGKKKNRLKNCMMISSSYKINFPIFWTKNSKSNPRHQTLLVNLQFISKIKSISK EKFFLIHSVQKPHLDRFHSRLVRKVCLFILPFVFLQCASSGFGTQGLLYENQRISLMETGNSATKEGFSCAKSYLGLIAL GDASIETAQKQGNIKEITSIELETYNFLGIYAKLCTVTKGI
Sequences:
>Translated_201_residues MNLNSKNFIRKKIPNIINLSILSQRKFGKKKNRLKNCMMISSSYKINFPIFWTKNSKSNPRHQTLLVNLQFISKIKSISK EKFFLIHSVQKPHLDRFHSRLVRKVCLFILPFVFLQCASSGFGTQGLLYENQRISLMETGNSATKEGFSCAKSYLGLIAL GDASIETAQKQGNIKEITSIELETYNFLGIYAKLCTVTKGI >Mature_201_residues MNLNSKNFIRKKIPNIINLSILSQRKFGKKKNRLKNCMMISSSYKINFPIFWTKNSKSNPRHQTLLVNLQFISKIKSISK EKFFLIHSVQKPHLDRFHSRLVRKVCLFILPFVFLQCASSGFGTQGLLYENQRISLMETGNSATKEGFSCAKSYLGLIAL GDASIETAQKQGNIKEITSIELETYNFLGIYAKLCTVTKGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22906; Mature: 22906
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLNSKNFIRKKIPNIINLSILSQRKFGKKKNRLKNCMMISSSYKINFPIFWTKNSKSNP CCCCCHHHHHHHCCCCEEHHHHHHHHCCHHHHHHHHHEEEECCCEEEEEEEEECCCCCCC RHQTLLVNLQFISKIKSISKEKFFLIHSVQKPHLDRFHSRLVRKVCLFILPFVFLQCASS CCEEEEEEHHHHHHHHHHCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC GFGTQGLLYENQRISLMETGNSATKEGFSCAKSYLGLIALGDASIETAQKQGNIKEITSI CCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHHCEEEECCCHHHHHHHCCCHHHHEEE ELETYNFLGIYAKLCTVTKGI EEEHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNLNSKNFIRKKIPNIINLSILSQRKFGKKKNRLKNCMMISSSYKINFPIFWTKNSKSNP CCCCCHHHHHHHCCCCEEHHHHHHHHCCHHHHHHHHHEEEECCCEEEEEEEEECCCCCCC RHQTLLVNLQFISKIKSISKEKFFLIHSVQKPHLDRFHSRLVRKVCLFILPFVFLQCASS CCEEEEEEHHHHHHHHHHCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC GFGTQGLLYENQRISLMETGNSATKEGFSCAKSYLGLIALGDASIETAQKQGNIKEITSI CCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHHCEEEECCCHHHHHHHCCCHHHHEEE ELETYNFLGIYAKLCTVTKGI EEEHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA