Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222783
Identifier: 183222783
GI number: 183222783
Start: 3563523
End: 3564374
Strand: Direct
Name: 183222783
Synonym: LEPBI_I3442
Alternate gene names: NA
Gene position: 3563523-3564374 (Clockwise)
Preceding gene: 183222782
Following gene: 183222784
Centisome position: 99.0
GC content: 38.85
Gene sequence:
>852_bases ATGAAAAATATAAGATTAATAGTTTTGATAGGTATCTCTTTATTTTTGATTCACTGTGACAAAAAAAAAGACCCTCTCAA TGACCTAGAAACCAATCTCCTTTGTACCTCCTTTGCGATCTGCGATGGAGAAACGCCTGCAAAAACAGGAATCATCGGAG ACAGTTGGACTGATATATTATTGGGATTCCCAATTGTCGAAACACTTCGACCACAGTTAGAAAATCGATTTAACTACCAA TTCGCTGGGGCTACTCTTGGCGGTAAAACATTACAACAGGTAGTAAGCCAAGGACTTCAATTCCAAGTCATTGACCAAGG TGGAGCCGACATGAAAGTTGTGTTACTTTCGTTAGGTGGAAATGACATCCAAGCCAACTTAAACGAGTATATTGGAAATG TGGACGCAGTGCAAGCTCAACGGTTTGCAAGAATCAAAGCCAATTTGAAACAACTCATTATTACTGGAAACGCATATAAA ATTGCTCGTTTCGGAGGACCTCCTATTAAATGGATCATACATGGTTACGATTATCCAAATCCATATATGCCTGCGGCAAT AGCTGGATCTGATGAAGGTTGCAAAACAAAATTTGACCGCATAGGGTTGATTGTGCCAGATGCTGCGGTGTTTACTTCCA CTCAGCTTGATGCTTTTAATAACCTACTAGTTGAGATCACAAGAGAGGAACCATCTCTTATTTATGTTGACTTACGAAAT ACATTAGGTGGTAAACCAAACTCTCGAGCTGAATTGATGTTGGATTGTATCCATGCAAATAACTTAGGATACACTTTACT TGCTGATAAGTTAGCCAGATTGATTTACCCAGTCACGAATATAGGATTTTAA
Upstream 100 bases:
>100_bases TTGACCGGTTTTTGGATATGTGTAGAACTTCAGTAAATCTGACCGGCGATCTCTCGTGCGCTTTTATCATGGACCATATC TGGAAGGAAGAAAAACAATT
Downstream 100 bases:
>100_bases CAATGAAACAGATATATTTAGTTTTGATTTTATTTTTTACATTTGCATCGAACATTTATTCTCAATACAATAACAAAGGT TTTGCTCATCCCTTACAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MKNIRLIVLIGISLFLIHCDKKKDPLNDLETNLLCTSFAICDGETPAKTGIIGDSWTDILLGFPIVETLRPQLENRFNYQ FAGATLGGKTLQQVVSQGLQFQVIDQGGADMKVVLLSLGGNDIQANLNEYIGNVDAVQAQRFARIKANLKQLIITGNAYK IARFGGPPIKWIIHGYDYPNPYMPAAIAGSDEGCKTKFDRIGLIVPDAAVFTSTQLDAFNNLLVEITREEPSLIYVDLRN TLGGKPNSRAELMLDCIHANNLGYTLLADKLARLIYPVTNIGF
Sequences:
>Translated_283_residues MKNIRLIVLIGISLFLIHCDKKKDPLNDLETNLLCTSFAICDGETPAKTGIIGDSWTDILLGFPIVETLRPQLENRFNYQ FAGATLGGKTLQQVVSQGLQFQVIDQGGADMKVVLLSLGGNDIQANLNEYIGNVDAVQAQRFARIKANLKQLIITGNAYK IARFGGPPIKWIIHGYDYPNPYMPAAIAGSDEGCKTKFDRIGLIVPDAAVFTSTQLDAFNNLLVEITREEPSLIYVDLRN TLGGKPNSRAELMLDCIHANNLGYTLLADKLARLIYPVTNIGF >Mature_283_residues MKNIRLIVLIGISLFLIHCDKKKDPLNDLETNLLCTSFAICDGETPAKTGIIGDSWTDILLGFPIVETLRPQLENRFNYQ FAGATLGGKTLQQVVSQGLQFQVIDQGGADMKVVLLSLGGNDIQANLNEYIGNVDAVQAQRFARIKANLKQLIITGNAYK IARFGGPPIKWIIHGYDYPNPYMPAAIAGSDEGCKTKFDRIGLIVPDAAVFTSTQLDAFNNLLVEITREEPSLIYVDLRN TLGGKPNSRAELMLDCIHANNLGYTLLADKLARLIYPVTNIGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31085; Mature: 31085
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIRLIVLIGISLFLIHCDKKKDPLNDLETNLLCTSFAICDGETPAKTGIIGDSWTDIL CCCEEEEEEEECEEEEEECCCCCCCHHHHHHHHEEEEEEEECCCCCCCCCCCCCCHHHHH LGFPIVETLRPQLENRFNYQFAGATLGGKTLQQVVSQGLQFQVIDQGGADMKVVLLSLGG HCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECC NDIQANLNEYIGNVDAVQAQRFARIKANLKQLIITGNAYKIARFGGPPIKWIIHGYDYPN CCEEECHHHHCCCCHHHHHHHHHHHHHCCEEEEEECCCEEEEECCCCCEEEEEECCCCCC PYMPAAIAGSDEGCKTKFDRIGLIVPDAAVFTSTQLDAFNNLLVEITREEPSLIYVDLRN CCCCEEECCCCCCCHHHHHHCCEECCCHHHHCCHHHHHHCCEEEEEECCCCCEEEEEEHH TLGGKPNSRAELMLDCIHANNLGYTLLADKLARLIYPVTNIGF HCCCCCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKNIRLIVLIGISLFLIHCDKKKDPLNDLETNLLCTSFAICDGETPAKTGIIGDSWTDIL CCCEEEEEEEECEEEEEECCCCCCCHHHHHHHHEEEEEEEECCCCCCCCCCCCCCHHHHH LGFPIVETLRPQLENRFNYQFAGATLGGKTLQQVVSQGLQFQVIDQGGADMKVVLLSLGG HCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECC NDIQANLNEYIGNVDAVQAQRFARIKANLKQLIITGNAYKIARFGGPPIKWIIHGYDYPN CCEEECHHHHCCCCHHHHHHHHHHHHHCCEEEEEECCCEEEEECCCCCEEEEEECCCCCC PYMPAAIAGSDEGCKTKFDRIGLIVPDAAVFTSTQLDAFNNLLVEITREEPSLIYVDLRN CCCCEEECCCCCCCHHHHHHCCEECCCHHHHCCHHHHHHCCEEEEEECCCCCEEEEEEHH TLGGKPNSRAELMLDCIHANNLGYTLLADKLARLIYPVTNIGF HCCCCCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA