Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222658
Identifier: 183222658
GI number: 183222658
Start: 3427262
End: 3427945
Strand: Direct
Name: 183222658
Synonym: LEPBI_I3313
Alternate gene names: NA
Gene position: 3427262-3427945 (Clockwise)
Preceding gene: 183222657
Following gene: 183222663
Centisome position: 95.21
GC content: 39.62
Gene sequence:
>684_bases ATGATCCAAAAACAGACACTCTTTCCATTCCTCTTGGGATGTTTTTTATTCGTAAACGTCCTTCCACTCATTGCCCAATC GCCAGAGTGGTCGGAATCAAAACGGAAAAAAGGAATCCAAATTCTCACAAGGCCAGTACCAGGTTCCAACATTGAAGAGT TTTTGGGCAAAACGGAAGTGGAAGCTTCTATCTCACAAATCATTGCTTTGCTAGTAGACCCACAATCTTGTAAAAATTTG TACCACCAATGCAAAGAACTTACTGTAATTTCTGGATCAGAGAAAAAATCATCTGTGTATTTACGAAATGGTGCACCTTG GCCGGTGAACGACCGTGATGTGATCATGGATAGAAGTTTTGAACAGAATGACAAAACTCTGACAACAACCATGAAGATGA AACGATTGGATTCCAATGCAAAAGGATCGCCATCTGGTGTCACTCGTATGCCTGGATTTGAAGGCTATTGGAAACTCATT CCACTTGCGAATGGTAAAATCAAGATTGAATACCAAGCGCATTTTGAACCAGGTGGTTCTGTTCCACAATCTGTGATCAA TTTGGTTTTAACTGACACTCCTTATGAAACTTTGTTAAACTTAAAATCTTTAGTAGAACAAGGAAAACACAAAGAAGCGA AGTATGATTGGATCAAGGAGCCGAATCACACTCCTTCCAATTAA
Upstream 100 bases:
>100_bases GAAGAAAAAATGGATTGAGTTTGTTACCAGCTTCTTCAACCTCATTATTCTTTGCAGAAACTGTAAGACCGCTCATACAT TCGCAAATAGGTAGGTAACC
Downstream 100 bases:
>100_bases TCGAATTCATTGACTCTTATCAATGTTTGGTTGTCCATTCCATTGATAGGAGTTACTGCCTAAAATTCTCAGATTTTATA CTTAGTATATTTGTGAGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MIQKQTLFPFLLGCFLFVNVLPLIAQSPEWSESKRKKGIQILTRPVPGSNIEEFLGKTEVEASISQIIALLVDPQSCKNL YHQCKELTVISGSEKKSSVYLRNGAPWPVNDRDVIMDRSFEQNDKTLTTTMKMKRLDSNAKGSPSGVTRMPGFEGYWKLI PLANGKIKIEYQAHFEPGGSVPQSVINLVLTDTPYETLLNLKSLVEQGKHKEAKYDWIKEPNHTPSN
Sequences:
>Translated_227_residues MIQKQTLFPFLLGCFLFVNVLPLIAQSPEWSESKRKKGIQILTRPVPGSNIEEFLGKTEVEASISQIIALLVDPQSCKNL YHQCKELTVISGSEKKSSVYLRNGAPWPVNDRDVIMDRSFEQNDKTLTTTMKMKRLDSNAKGSPSGVTRMPGFEGYWKLI PLANGKIKIEYQAHFEPGGSVPQSVINLVLTDTPYETLLNLKSLVEQGKHKEAKYDWIKEPNHTPSN >Mature_227_residues MIQKQTLFPFLLGCFLFVNVLPLIAQSPEWSESKRKKGIQILTRPVPGSNIEEFLGKTEVEASISQIIALLVDPQSCKNL YHQCKELTVISGSEKKSSVYLRNGAPWPVNDRDVIMDRSFEQNDKTLTTTMKMKRLDSNAKGSPSGVTRMPGFEGYWKLI PLANGKIKIEYQAHFEPGGSVPQSVINLVLTDTPYETLLNLKSLVEQGKHKEAKYDWIKEPNHTPSN
Specific function: May play a role in the interaction of the bacterium with animal cells [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 START domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002913 [H]
Pfam domain/function: PF01852 START [H]
EC number: NA
Molecular weight: Translated: 25562; Mature: 25562
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQKQTLFPFLLGCFLFVNVLPLIAQSPEWSESKRKKGIQILTRPVPGSNIEEFLGKTEV CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEECCCCCCCHHHHHCCHHH EASISQIIALLVDPQSCKNLYHQCKELTVISGSEKKSSVYLRNGAPWPVNDRDVIMDRSF HHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCEEEEECCCCCCCCCCCEEECCCC EQNDKTLTTTMKMKRLDSNAKGSPSGVTRMPGFEGYWKLIPLANGKIKIEYQAHFEPGGS CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCC VPQSVINLVLTDTPYETLLNLKSLVEQGKHKEAKYDWIKEPNHTPSN CHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCC >Mature Secondary Structure MIQKQTLFPFLLGCFLFVNVLPLIAQSPEWSESKRKKGIQILTRPVPGSNIEEFLGKTEV CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEECCCCCCCHHHHHCCHHH EASISQIIALLVDPQSCKNLYHQCKELTVISGSEKKSSVYLRNGAPWPVNDRDVIMDRSF HHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCEEEEECCCCCCCCCCCEEECCCC EQNDKTLTTTMKMKRLDSNAKGSPSGVTRMPGFEGYWKLIPLANGKIKIEYQAHFEPGGS CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCC VPQSVINLVLTDTPYETLLNLKSLVEQGKHKEAKYDWIKEPNHTPSN CHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 11276083 [H]