Click here to switch to the map view.

The map label for this gene is 183222614

Identifier: 183222614

GI number: 183222614

Start: 3383010

End: 3383669

Strand: Direct

Name: 183222614

Synonym: LEPBI_I3269

Alternate gene names: NA

Gene position: 3383010-3383669 (Clockwise)

Preceding gene: 183222610

Following gene: 183222615

Centisome position: 93.98

GC content: 41.82

Gene sequence:

>660_bases
TTGCAGAGATTGTTAAACTCTGATACATTCCACGAGAAAAATATGCTAAATACAAATTTGAATTTACCAACCTTTCTTCC
TCACATTCTCACCGTTGATGTTTGTACTTTAGGCAATCGACTATTAGACCAAACAGATGTCCGAAACCTACTGAATCGAA
TCAGGGGCCGAAACCATATTCATTACTTAATCATCAAATTTTTAGTCTGCACCGGGTTGTCATTACCCGAACTCATCCAC
CTAAAAATCGCCGACTTTAATTCCGAAATGGATCGTTTCCATTTAAAGAACGGCGGTCGTTTGCGTAGGAGGAATATTTT
CCTAGATCCAAAGTTTGCCGTCGAACTCTATCGTTACGCCTGCGAATTTTCACCAAGTGATTATTTATTCCCAGGGAGAG
ACGGAATTTTGCGCACAAGAACCATCCAAAAGATTCTGAAAACGGCAAGCAGGCTAATCTCGAAAGAGATCCATATTCCG
TTCTTAAGAGATGTGATTGCGCTGCACTTATTCCAAAACGGATTCCCCGTTTGGGAAATCCAAGAATTTTTGGGCCACCG
AACGACCCGTTCCACAAGACAGAGGATTATGTTGCATATCCCAGAGACAGAACACAATGACCCTCGACTTTTTACGAGAA
ACAGAAACCAAGCGGCGTAA

Upstream 100 bases:

>100_bases
ATTTGAATCAAGCAGAAAAATTCATCGTGCAAAAACATGAACTAGGAAATTTATTTCTTCGAAAATGGTGATCCAAAACT
ACAGTTTGGTGACAATTTAA

Downstream 100 bases:

>100_bases
AAATTTCTTGAACCTTTGGTGTTTTCAAGGATTCTAGTCACCAAGTAGGCTCGCTTTGGAAATCAAAACCAAAAAAATCG
GAAAGCACACACTCGTTCAC

Product: putative integrase

Products: NA

Alternate protein names: Integrase/Recombinase; Integrase; Integrase/Recombinase Y4qK; Integrase Family Protein

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MQRLLNSDTFHEKNMLNTNLNLPTFLPHILTVDVCTLGNRLLDQTDVRNLLNRIRGRNHIHYLIIKFLVCTGLSLPELIH
LKIADFNSEMDRFHLKNGGRLRRRNIFLDPKFAVELYRYACEFSPSDYLFPGRDGILRTRTIQKILKTASRLISKEIHIP
FLRDVIALHLFQNGFPVWEIQEFLGHRTTRSTRQRIMLHIPETEHNDPRLFTRNRNQAA

Sequences:

>Translated_219_residues
MQRLLNSDTFHEKNMLNTNLNLPTFLPHILTVDVCTLGNRLLDQTDVRNLLNRIRGRNHIHYLIIKFLVCTGLSLPELIH
LKIADFNSEMDRFHLKNGGRLRRRNIFLDPKFAVELYRYACEFSPSDYLFPGRDGILRTRTIQKILKTASRLISKEIHIP
FLRDVIALHLFQNGFPVWEIQEFLGHRTTRSTRQRIMLHIPETEHNDPRLFTRNRNQAA
>Mature_219_residues
MQRLLNSDTFHEKNMLNTNLNLPTFLPHILTVDVCTLGNRLLDQTDVRNLLNRIRGRNHIHYLIIKFLVCTGLSLPELIH
LKIADFNSEMDRFHLKNGGRLRRRNIFLDPKFAVELYRYACEFSPSDYLFPGRDGILRTRTIQKILKTASRLISKEIHIP
FLRDVIALHLFQNGFPVWEIQEFLGHRTTRSTRQRIMLHIPETEHNDPRLFTRNRNQAA

Specific function: Unknown

COG id: COG4974

COG function: function code L; Site-specific recombinase XerD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25862; Mature: 25862

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRLLNSDTFHEKNMLNTNLNLPTFLPHILTVDVCTLGNRLLDQTDVRNLLNRIRGRNHI
CCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
HYLIIKFLVCTGLSLPELIHLKIADFNSEMDRFHLKNGGRLRRRNIFLDPKFAVELYRYA
HHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHECCCCCCEEECEEEECHHHHHHHHHHH
CEFSPSDYLFPGRDGILRTRTIQKILKTASRLISKEIHIPFLRDVIALHLFQNGFPVWEI
HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH
QEFLGHRTTRSTRQRIMLHIPETEHNDPRLFTRNRNQAA
HHHHCCCCCHHHHHEEEEECCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MQRLLNSDTFHEKNMLNTNLNLPTFLPHILTVDVCTLGNRLLDQTDVRNLLNRIRGRNHI
CCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
HYLIIKFLVCTGLSLPELIHLKIADFNSEMDRFHLKNGGRLRRRNIFLDPKFAVELYRYA
HHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHECCCCCCEEECEEEECHHHHHHHHHHH
CEFSPSDYLFPGRDGILRTRTIQKILKTASRLISKEIHIPFLRDVIALHLFQNGFPVWEI
HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH
QEFLGHRTTRSTRQRIMLHIPETEHNDPRLFTRNRNQAA
HHHHCCCCCHHHHHEEEEECCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA