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The map label for this gene is rlpA [H]

Identifier: 183222587

GI number: 183222587

Start: 3356137

End: 3357018

Strand: Direct

Name: rlpA [H]

Synonym: LEPBI_I3242

Alternate gene names: 183222587

Gene position: 3356137-3357018 (Clockwise)

Preceding gene: 183222584

Following gene: 183222588

Centisome position: 93.23

GC content: 42.29

Gene sequence:

>882_bases
ATGCAAAGACTCATACTCATTACCATTTTATTGTGGTTGGTGTCCTGCAGTTCTGCTGATGCCACACGTAGGGATTATAG
TGCTTCTGGTGATCCAGAGGATATTTTCTTCGAACGTTCACAAAAATCGAAACCTACCGGAACAAATGGATCGAACGACC
CAGTGGCAAGATCCATCATGGATGATTTGGAAACAAAATCCAAACAAACCACCACAGCCCAGGCAGACCTACCAACAAAA
AAACCAACCACTCAATTCGATGAAGTGGGTTTATCCTCTTGGTATGGACAAAAGTTCCAAGGACGTCCAACAGCAAGTGG
TGAACCATTTGATCGCATGAAAATGACGGGAGCACACCGAACCCTTCCCATTGGTACCGTTGTGAAAATCCAAAACCTAG
AAAACCAAAAGGAAGCTGTGGTTCGTATCAATGACAGAGGGCCATTTGTGGATGAAAGGATTGTGGATGTTTCCGAAAAA
ACAGCAGAAATCTTAGAATTTAAAGACAAAGGGATCACAAAAGTTGGCATCAAAGTTCTCAAAAAAGGCGAAGATGAACT
AGCAGATGATTTAGATGATTCTGACCTTTTAGACGATACCCCAGCAAAACCTGAAAAATTGACTCCTGTCAAACCTGGTG
TCACAAAACCAATTGCTGCGGGAAAAGGATTTACGGTCCAAGTTGGCGTTTTCCAAGAAAAAGAAAGAGCCATCAAATAC
CAAGAAACCATCAAATCTGAGTACAACCAAACCGTCTTTGTCACTCCAAGAGATGGAAAATACGTCGTTCAAGTGGGGGA
TTTCGCAGACCGTTCCAAGGCTGAATCTCTCAAATCAAAATTGAAATACGATGGGATTGATTGTTTTATCGCAACCCGTT
AG

Upstream 100 bases:

>100_bases
GATTATCGTTTCGGAATTCATTCTCCCCTAGAATTTTTATCACGCATTTAGAAAAACCTTCCGAAAGGTACACACAAGAG
TCCAGAGAAAGGGGAAAATT

Downstream 100 bases:

>100_bases
ACATTTCCCCTTTCTTCCGAGCAAAAAAGTACAGTTCTGATTTGCTCGGAGTGGGTGGAAAATGAATTGATTTCACATTT
TCTCCTGTTACGATTTCGTA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MQRLILITILLWLVSCSSADATRRDYSASGDPEDIFFERSQKSKPTGTNGSNDPVARSIMDDLETKSKQTTTAQADLPTK
KPTTQFDEVGLSSWYGQKFQGRPTASGEPFDRMKMTGAHRTLPIGTVVKIQNLENQKEAVVRINDRGPFVDERIVDVSEK
TAEILEFKDKGITKVGIKVLKKGEDELADDLDDSDLLDDTPAKPEKLTPVKPGVTKPIAAGKGFTVQVGVFQEKERAIKY
QETIKSEYNQTVFVTPRDGKYVVQVGDFADRSKAESLKSKLKYDGIDCFIATR

Sequences:

>Translated_293_residues
MQRLILITILLWLVSCSSADATRRDYSASGDPEDIFFERSQKSKPTGTNGSNDPVARSIMDDLETKSKQTTTAQADLPTK
KPTTQFDEVGLSSWYGQKFQGRPTASGEPFDRMKMTGAHRTLPIGTVVKIQNLENQKEAVVRINDRGPFVDERIVDVSEK
TAEILEFKDKGITKVGIKVLKKGEDELADDLDDSDLLDDTPAKPEKLTPVKPGVTKPIAAGKGFTVQVGVFQEKERAIKY
QETIKSEYNQTVFVTPRDGKYVVQVGDFADRSKAESLKSKLKYDGIDCFIATR
>Mature_293_residues
MQRLILITILLWLVSCSSADATRRDYSASGDPEDIFFERSQKSKPTGTNGSNDPVARSIMDDLETKSKQTTTAQADLPTK
KPTTQFDEVGLSSWYGQKFQGRPTASGEPFDRMKMTGAHRTLPIGTVVKIQNLENQKEAVVRINDRGPFVDERIVDVSEK
TAEILEFKDKGITKVGIKVLKKGEDELADDLDDSDLLDDTPAKPEKLTPVKPGVTKPIAAGKGFTVQVGVFQEKERAIKY
QETIKSEYNQTVFVTPRDGKYVVQVGDFADRSKAESLKSKLKYDGIDCFIATR

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=102, Percent_Identity=39.2156862745098, Blast_Score=77, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009009
- InterPro:   IPR022438
- InterPro:   IPR012997 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 32545; Mature: 32545

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRLILITILLWLVSCSSADATRRDYSASGDPEDIFFERSQKSKPTGTNGSNDPVARSIM
CCHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHEECCCCCCCCCCCCCCCHHHHHHH
DDLETKSKQTTTAQADLPTKKPTTQFDEVGLSSWYGQKFQGRPTASGEPFDRMKMTGAHR
HHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHCCCCC
TLPIGTVVKIQNLENQKEAVVRINDRGPFVDERIVDVSEKTAEILEFKDKGITKVGIKVL
CCCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KKGEDELADDLDDSDLLDDTPAKPEKLTPVKPGVTKPIAAGKGFTVQVGVFQEKERAIKY
HCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHH
QETIKSEYNQTVFVTPRDGKYVVQVGDFADRSKAESLKSKLKYDGIDCFIATR
HHHHHHHCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECC
>Mature Secondary Structure
MQRLILITILLWLVSCSSADATRRDYSASGDPEDIFFERSQKSKPTGTNGSNDPVARSIM
CCHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHEECCCCCCCCCCCCCCCHHHHHHH
DDLETKSKQTTTAQADLPTKKPTTQFDEVGLSSWYGQKFQGRPTASGEPFDRMKMTGAHR
HHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHCCCCC
TLPIGTVVKIQNLENQKEAVVRINDRGPFVDERIVDVSEKTAEILEFKDKGITKVGIKVL
CCCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KKGEDELADDLDDSDLLDDTPAKPEKLTPVKPGVTKPIAAGKGFTVQVGVFQEKERAIKY
HCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHH
QETIKSEYNQTVFVTPRDGKYVVQVGDFADRSKAESLKSKLKYDGIDCFIATR
HHHHHHHCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA