| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222566
Identifier: 183222566
GI number: 183222566
Start: 3334527
End: 3335528
Strand: Direct
Name: 183222566
Synonym: LEPBI_I3221
Alternate gene names: NA
Gene position: 3334527-3335528 (Clockwise)
Preceding gene: 183222563
Following gene: 183222567
Centisome position: 92.63
GC content: 38.82
Gene sequence:
>1002_bases ATGGTCTCAAAACCCAAATCTTTGGTCTGCGTCTTAAAAGAAAACCGTGTCGAACTTCGTGTCAAACCCGTAAACCCCTA CCAAGACGATTTGATGCAAGTCTATGAAATTTTAATCGAACCATTGGAACGATCCGCCAAACGGGCAGCAATTGAAGATA TCTCAGCGTACGAACTCCAAATGGCCCAAACGGCCGACCTAGGAACTGTCATATCCATCTATGGAAAAACATCCATCATC AACCAAGCATTAAACCAATGGCAAGTACACTTGGAACAAGTCCTCACTAATTTTGGATACTTTATCAAAAAAATACAAAT CGGTTTTTATTATGCGGCCGACACACAACTCATGGAAGCCCTTGCAACTTCCAAAGCCCCATATTACGTGCGTGATGCGA ATCGCAGAATTTTTTACACAGATCGAGGGTTTTATAGTCCCAAAAAACTAAGTGAAATGTATGTTCGATCCTACTTAGAT TCCCTTTTACTCAATAATACAAAATCGACATTGATCTTCCCATTTTTCTCGAATGGAAAAGTACTCTTAGGATACTTTGA AATTTTAAGCAATTTACCTGATTTGGGAAATTCATCCTTACAATCGGACATCGAAGGCCCGGAAGGGATCGGACCTTTAT TATCTTTTTTGGATCAAAAAGCAGAAGAATTTGTTTTTCAACTTGAATTTGCATATGCAAAAGATTGGGAAACAATTATT CGCACAACACCCGTTAGAGACATTAGCCAGGATGGACGTGGGATAGGAATCACATTACCAAAGGGAACTAACATCGACCT AAGACCGATTGGATCTCCTGTTTCGTTCCAACTCAAAATCAATTCTTCTCCTTATACTTTTTTTGGAAGTTTAAGAAGTC TAAAAAAAGGGGAGAATGACACAACCAATATCGGTTTACAAATTTTTCAATGTGACAAATCGGAAGGGATGTCCCTCCTT AGTTCTTACGCATCAAATTTAATTGGAGAAGCAGTTTCATGA
Upstream 100 bases:
>100_bases ACAAGACCAAGACACCAAACAAAAGTTTACACTGAACAATCCTGTTGCTGTCAATGACATCTTAAAATCGGTCCACATCA CCATAACTGCCGCGGAGCCG
Downstream 100 bases:
>100_bases CGCCAGAGCAGTATGAAACCATCATCACACTTTTAACCGAAATCCAAAACCAAGGTGGCTCCGATCCCTACCGATTGGCA TTGTACTTAGTCCCTCATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MVSKPKSLVCVLKENRVELRVKPVNPYQDDLMQVYEILIEPLERSAKRAAIEDISAYELQMAQTADLGTVISIYGKTSII NQALNQWQVHLEQVLTNFGYFIKKIQIGFYYAADTQLMEALATSKAPYYVRDANRRIFYTDRGFYSPKKLSEMYVRSYLD SLLLNNTKSTLIFPFFSNGKVLLGYFEILSNLPDLGNSSLQSDIEGPEGIGPLLSFLDQKAEEFVFQLEFAYAKDWETII RTTPVRDISQDGRGIGITLPKGTNIDLRPIGSPVSFQLKINSSPYTFFGSLRSLKKGENDTTNIGLQIFQCDKSEGMSLL SSYASNLIGEAVS
Sequences:
>Translated_333_residues MVSKPKSLVCVLKENRVELRVKPVNPYQDDLMQVYEILIEPLERSAKRAAIEDISAYELQMAQTADLGTVISIYGKTSII NQALNQWQVHLEQVLTNFGYFIKKIQIGFYYAADTQLMEALATSKAPYYVRDANRRIFYTDRGFYSPKKLSEMYVRSYLD SLLLNNTKSTLIFPFFSNGKVLLGYFEILSNLPDLGNSSLQSDIEGPEGIGPLLSFLDQKAEEFVFQLEFAYAKDWETII RTTPVRDISQDGRGIGITLPKGTNIDLRPIGSPVSFQLKINSSPYTFFGSLRSLKKGENDTTNIGLQIFQCDKSEGMSLL SSYASNLIGEAVS >Mature_333_residues MVSKPKSLVCVLKENRVELRVKPVNPYQDDLMQVYEILIEPLERSAKRAAIEDISAYELQMAQTADLGTVISIYGKTSII NQALNQWQVHLEQVLTNFGYFIKKIQIGFYYAADTQLMEALATSKAPYYVRDANRRIFYTDRGFYSPKKLSEMYVRSYLD SLLLNNTKSTLIFPFFSNGKVLLGYFEILSNLPDLGNSSLQSDIEGPEGIGPLLSFLDQKAEEFVFQLEFAYAKDWETII RTTPVRDISQDGRGIGITLPKGTNIDLRPIGSPVSFQLKINSSPYTFFGSLRSLKKGENDTTNIGLQIFQCDKSEGMSLL SSYASNLIGEAVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37483; Mature: 37483
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSKPKSLVCVLKENRVELRVKPVNPYQDDLMQVYEILIEPLERSAKRAAIEDISAYELQ CCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAQTADLGTVISIYGKTSIINQALNQWQVHLEQVLTNFGYFIKKIQIGFYYAADTQLMEA HHHHCCCCCEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECHHHHHHH LATSKAPYYVRDANRRIFYTDRGFYSPKKLSEMYVRSYLDSLLLNNTKSTLIFPFFSNGK HHHCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC VLLGYFEILSNLPDLGNSSLQSDIEGPEGIGPLLSFLDQKAEEFVFQLEFAYAKDWETII EEEHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH RTTPVRDISQDGRGIGITLPKGTNIDLRPIGSPVSFQLKINSSPYTFFGSLRSLKKGEND HCCCCHHHHCCCCEEEEECCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCCC TTNIGLQIFQCDKSEGMSLLSSYASNLIGEAVS CCEECEEEEECCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVSKPKSLVCVLKENRVELRVKPVNPYQDDLMQVYEILIEPLERSAKRAAIEDISAYELQ CCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAQTADLGTVISIYGKTSIINQALNQWQVHLEQVLTNFGYFIKKIQIGFYYAADTQLMEA HHHHCCCCCEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECHHHHHHH LATSKAPYYVRDANRRIFYTDRGFYSPKKLSEMYVRSYLDSLLLNNTKSTLIFPFFSNGK HHHCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC VLLGYFEILSNLPDLGNSSLQSDIEGPEGIGPLLSFLDQKAEEFVFQLEFAYAKDWETII EEEHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH RTTPVRDISQDGRGIGITLPKGTNIDLRPIGSPVSFQLKINSSPYTFFGSLRSLKKGEND HCCCCHHHHCCCCEEEEECCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCCC TTNIGLQIFQCDKSEGMSLLSSYASNLIGEAVS CCEECEEEEECCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA