| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is yihQ [H]
Identifier: 183222551
GI number: 183222551
Start: 3322602
End: 3324836
Strand: Direct
Name: yihQ [H]
Synonym: LEPBI_I3206
Alternate gene names: 183222551
Gene position: 3322602-3324836 (Clockwise)
Preceding gene: 183222550
Following gene: 183222552
Centisome position: 92.3
GC content: 41.66
Gene sequence:
>2235_bases ATGGTTTTTCGTTTTTTATCCCTTTGTTCACTATTTTTTTTCTTAGAATGTGCTTCGCATGTTCTCACTCCGATTCCCAT CACGGAAGAAACCTACCAAGTCTCCAAACAAATCCAATGGATCCAAACACCAAACAAACTCATTCTCAAAAACACATCCT TTGACCGAAACTTCATTGAACTTTCATTAAACGAACCATTCCTCACAGTCTCAGAAGTAAATACAATTTCCAAATACAGA ATGGCTTCCTTTAAGTTCGAAGAATCGACCAAACGGACTTGTTCCGAACAAACAGTAGATTCCATCAAAAAAGAAACGGG CAAAATCACAATCCAAGGGAAACTTTCCGGAAAAAATTGTGTGACCAATTACCAAGTATTGTTTCTCACAAAATCAGATA CGGAACTTGAATTTAAAATTACTGTCTCAGATGAAACACTGAATCGCATCCATCTCGTTTATGCATCTCATCCGGAAGAA AAAATTTTTGGCCTCGGGGAACAATTCACTTACGATGAATTCAAAGGGAAAAAACCATTTTTTTTCACAGAAGAACAAGG GATCGGTCGGGGTGACCAACCCATCACAGCAGGCGCCAATTTACTTGCAGGCGCTGGTGGAAACGCGTATACAACGTATG CTCCTATCCCCCACTACATCAGTTCTGAAAATCGATCCGTATTTTTTGAAAACAGTGGTTATGCGAAGTTTGATTTCAGT GATGCACGAAAAACAAAAGTAGAATTTTGGGATTTCCAATCAGAAAAATCGGTCACAGGTACCATTTGGTTAGCAAGTTC AGCCAAATCTCTGATTGAAACTTATACAAAAAAAACAGGTCGTTTTCCAAAATTACCTGACTGGGCTTATGGAACTTGGC TAGGAATCCAAGGGGGAACTGAAAAAGTAACAACCATCGTCAAACAAGCGAAAGCTGCCGGTAACCCAGTCACCGCTCTT TGGATCCAAGATTGGTGTGGTAGACGTGTCACAAATTTCGGGGACCAACTCAAATGGCGTTGGTATGCAGACGAAACCCT TTACCCGGATTTTAAAAAATTCGTGAAATCAATGAATGATGAGAATGTACAGGTGTTAGGTTATATCAATTCCTTTTTAG CCGATACCGATCCTAAAAAACCAGGTGATGATTTTACAAACCCACTCCTCACAGAAGCAAAATCCAAAGGATACCTTGTC AAAAATGAAAAGGGAGAAGATTATCTCATCCAAACTGTCGGTTTTCCTGCTTACCTCATCGACCTCACAAACCCTGCCGC AGTCAAATGGACAAAGGATCTCATCAAAAAGAATTTAATCGGAATGGGTTTATCCGGTTGGATGGCTGACTTTGGAGAAT GGTTGCCCTATGATGCCAAACTCCATTCCGGAGTGGATGCAAAGATTTACCACAATCGTTACCCAGTCGACTGGGCACGG ATCAACCGGGAAGCCATCAAAGAGTCAGGAATGGAAGGAAAAATTGTTTTTTTCACAAGAGCGGGATACAGTTATTCCAA TGCTCATTCCACATTGTTTTGGGAAGGAGACCAAATGGTCAGTTTTGGAACGAATGATGGACTACCTTCCTCTATCGTTG GACTCACAACATCGGGTATCAGTGGTTATGCGTTAAATCATAGCGACATTGGTGGATACACTACCATTTCCAATCCCTTA AAAAACTACCATAGAACAAAGGAAGTATTACTCCGTTGGGCAGAAGTCTCTGCCTTCACACCAGTGTTTCGAACACACGA GGGAAATCGTCCTCTTAAAAACTGGCAAGTGTATACCTACACAAAACCTGATGGTACAAAATCTCTTGGTGACGAAGATA CCGTGCAACTCTTTGCCAAAATCGCAAGGATCCATTTTGCCTTAAAACCATATATCCAAAGTTTGGTGGAGGAAGCTTCT AAAACAGGACTCCCCGTTGTAAGGCACAATGCCATAGTGGAACCAGAAGACAAAATTTTACTCCAATACAAATACCAATT CTTTCTCGGAGATGACCTACTCGTCGCACCCGTTGTAGAATCCAACGAAATTGTTCAGGAAGTGTATCTCCCACGTGGGA AGTGGTCTCATATTTGGACAGGAACCAATTTCGAAGGGAATCGGAAAATCCAAGTTTCCGCTCCCATAGGCAAACCACCA GCCTTCATCCGAGTGGGTGGAAAGTCTGAAATGTTGATTCGGTCATCTCTCGAAAGCATTCGGAACAAACAGTAA
Upstream 100 bases:
>100_bases AGCTCCAAGAGTCGGCGGGGTCGATCGCAAGAAAGTCTAAAAAAAGATTTACGAATCCTTTGACCATCGGTTCACTAAGC TCTCGCTCTTGGAGGATCCG
Downstream 100 bases:
>100_bases GGAAACACCAAATGAAATTTGCATTGATAGGTGATATCCATGGGTATTGGAACAAAGAGGACATCGAATATTTTAACGAG TCCGATTACGATTTTTTATT
Product: alpha-glucosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 744; Mature: 744
Protein sequence:
>744_residues MVFRFLSLCSLFFFLECASHVLTPIPITEETYQVSKQIQWIQTPNKLILKNTSFDRNFIELSLNEPFLTVSEVNTISKYR MASFKFEESTKRTCSEQTVDSIKKETGKITIQGKLSGKNCVTNYQVLFLTKSDTELEFKITVSDETLNRIHLVYASHPEE KIFGLGEQFTYDEFKGKKPFFFTEEQGIGRGDQPITAGANLLAGAGGNAYTTYAPIPHYISSENRSVFFENSGYAKFDFS DARKTKVEFWDFQSEKSVTGTIWLASSAKSLIETYTKKTGRFPKLPDWAYGTWLGIQGGTEKVTTIVKQAKAAGNPVTAL WIQDWCGRRVTNFGDQLKWRWYADETLYPDFKKFVKSMNDENVQVLGYINSFLADTDPKKPGDDFTNPLLTEAKSKGYLV KNEKGEDYLIQTVGFPAYLIDLTNPAAVKWTKDLIKKNLIGMGLSGWMADFGEWLPYDAKLHSGVDAKIYHNRYPVDWAR INREAIKESGMEGKIVFFTRAGYSYSNAHSTLFWEGDQMVSFGTNDGLPSSIVGLTTSGISGYALNHSDIGGYTTISNPL KNYHRTKEVLLRWAEVSAFTPVFRTHEGNRPLKNWQVYTYTKPDGTKSLGDEDTVQLFAKIARIHFALKPYIQSLVEEAS KTGLPVVRHNAIVEPEDKILLQYKYQFFLGDDLLVAPVVESNEIVQEVYLPRGKWSHIWTGTNFEGNRKIQVSAPIGKPP AFIRVGGKSEMLIRSSLESIRNKQ
Sequences:
>Translated_744_residues MVFRFLSLCSLFFFLECASHVLTPIPITEETYQVSKQIQWIQTPNKLILKNTSFDRNFIELSLNEPFLTVSEVNTISKYR MASFKFEESTKRTCSEQTVDSIKKETGKITIQGKLSGKNCVTNYQVLFLTKSDTELEFKITVSDETLNRIHLVYASHPEE KIFGLGEQFTYDEFKGKKPFFFTEEQGIGRGDQPITAGANLLAGAGGNAYTTYAPIPHYISSENRSVFFENSGYAKFDFS DARKTKVEFWDFQSEKSVTGTIWLASSAKSLIETYTKKTGRFPKLPDWAYGTWLGIQGGTEKVTTIVKQAKAAGNPVTAL WIQDWCGRRVTNFGDQLKWRWYADETLYPDFKKFVKSMNDENVQVLGYINSFLADTDPKKPGDDFTNPLLTEAKSKGYLV KNEKGEDYLIQTVGFPAYLIDLTNPAAVKWTKDLIKKNLIGMGLSGWMADFGEWLPYDAKLHSGVDAKIYHNRYPVDWAR INREAIKESGMEGKIVFFTRAGYSYSNAHSTLFWEGDQMVSFGTNDGLPSSIVGLTTSGISGYALNHSDIGGYTTISNPL KNYHRTKEVLLRWAEVSAFTPVFRTHEGNRPLKNWQVYTYTKPDGTKSLGDEDTVQLFAKIARIHFALKPYIQSLVEEAS KTGLPVVRHNAIVEPEDKILLQYKYQFFLGDDLLVAPVVESNEIVQEVYLPRGKWSHIWTGTNFEGNRKIQVSAPIGKPP AFIRVGGKSEMLIRSSLESIRNKQ >Mature_744_residues MVFRFLSLCSLFFFLECASHVLTPIPITEETYQVSKQIQWIQTPNKLILKNTSFDRNFIELSLNEPFLTVSEVNTISKYR MASFKFEESTKRTCSEQTVDSIKKETGKITIQGKLSGKNCVTNYQVLFLTKSDTELEFKITVSDETLNRIHLVYASHPEE KIFGLGEQFTYDEFKGKKPFFFTEEQGIGRGDQPITAGANLLAGAGGNAYTTYAPIPHYISSENRSVFFENSGYAKFDFS DARKTKVEFWDFQSEKSVTGTIWLASSAKSLIETYTKKTGRFPKLPDWAYGTWLGIQGGTEKVTTIVKQAKAAGNPVTAL WIQDWCGRRVTNFGDQLKWRWYADETLYPDFKKFVKSMNDENVQVLGYINSFLADTDPKKPGDDFTNPLLTEAKSKGYLV KNEKGEDYLIQTVGFPAYLIDLTNPAAVKWTKDLIKKNLIGMGLSGWMADFGEWLPYDAKLHSGVDAKIYHNRYPVDWAR INREAIKESGMEGKIVFFTRAGYSYSNAHSTLFWEGDQMVSFGTNDGLPSSIVGLTTSGISGYALNHSDIGGYTTISNPL KNYHRTKEVLLRWAEVSAFTPVFRTHEGNRPLKNWQVYTYTKPDGTKSLGDEDTVQLFAKIARIHFALKPYIQSLVEEAS KTGLPVVRHNAIVEPEDKILLQYKYQFFLGDDLLVAPVVESNEIVQEVYLPRGKWSHIWTGTNFEGNRKIQVSAPIGKPP AFIRVGGKSEMLIRSSLESIRNKQ
Specific function: Exhibits hydrolysis activity against alpha-glucosyl fluoride, although natural substrates, such as alpha-glucobioses are scarcely hydrolyzed [H]
COG id: COG1501
COG function: function code G; Alpha-glucosidases, family 31 of glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 31 family [H]
Homologues:
Organism=Homo sapiens, GI153791946, Length=447, Percent_Identity=23.2662192393736, Blast_Score=89, Evalue=2e-17, Organism=Homo sapiens, GI66346737, Length=353, Percent_Identity=26.3456090651558, Blast_Score=88, Evalue=4e-17, Organism=Homo sapiens, GI88900491, Length=380, Percent_Identity=25, Blast_Score=80, Evalue=8e-15, Organism=Homo sapiens, GI38202257, Length=380, Percent_Identity=25, Blast_Score=80, Evalue=1e-14, Organism=Homo sapiens, GI310115361, Length=260, Percent_Identity=25.7692307692308, Blast_Score=74, Evalue=5e-13, Organism=Homo sapiens, GI221316699, Length=260, Percent_Identity=25.7692307692308, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI2367323, Length=666, Percent_Identity=39.9399399399399, Blast_Score=460, Evalue=1e-130, Organism=Escherichia coli, GI2367256, Length=576, Percent_Identity=22.5694444444444, Blast_Score=149, Evalue=4e-37, Organism=Caenorhabditis elegans, GI17560798, Length=273, Percent_Identity=26.007326007326, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17560800, Length=273, Percent_Identity=26.007326007326, Blast_Score=84, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71991189, Length=321, Percent_Identity=25.5451713395639, Blast_Score=75, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6319706, Length=548, Percent_Identity=22.4452554744526, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24650054, Length=389, Percent_Identity=23.3933161953728, Blast_Score=86, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011013 - InterPro: IPR000322 - InterPro: IPR017853 [H]
Pfam domain/function: PF01055 Glyco_hydro_31 [H]
EC number: =3.2.1.20 [H]
Molecular weight: Translated: 84245; Mature: 84245
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFRFLSLCSLFFFLECASHVLTPIPITEETYQVSKQIQWIQTPNKLILKNTSFDRNFIE CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCEEEEECCCCCCCEEE LSLNEPFLTVSEVNTISKYRMASFKFEESTKRTCSEQTVDSIKKETGKITIQGKLSGKNC EECCCCEEEHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCC VTNYQVLFLTKSDTELEFKITVSDETLNRIHLVYASHPEEKIFGLGEQFTYDEFKGKKPF EEEEEEEEEEECCCEEEEEEEECCCCCCEEEEEEECCCHHHHHCCCCCCCHHHHCCCCCE FFTEEQGIGRGDQPITAGANLLAGAGGNAYTTYAPIPHYISSENRSVFFENSGYAKFDFS EEECCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCHHHCCCCCEEEEECCCEEEEECC DARKTKVEFWDFQSEKSVTGTIWLASSAKSLIETYTKKTGRFPKLPDWAYGTWLGIQGGT CCCCCEEEEEECCCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCH EKVTTIVKQAKAAGNPVTALWIQDWCGRRVTNFGDQLKWRWYADETLYPDFKKFVKSMND HHHHHHHHHHHHCCCCEEEEEEHHHCCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCC ENVQVLGYINSFLADTDPKKPGDDFTNPLLTEAKSKGYLVKNEKGEDYLIQTVGFPAYLI CCEEEEEEHHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCEEEEECCCCEEEE DLTNPAAVKWTKDLIKKNLIGMGLSGWMADFGEWLPYDAKLHSGVDAKIYHNRYPVDWAR ECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHCCCCCEEEECCCCCCHHHH INREAIKESGMEGKIVFFTRAGYSYSNAHSTLFWEGDQMVSFGTNDGLPSSIVGLTTSGI HCHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEECCCEEEEECCCCCCCCHHHEEEECCC SGYALNHSDIGGYTTISNPLKNYHRTKEVLLRWAEVSAFTPVFRTHEGNRPLKNWQVYTY CCEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEEE TKPDGTKSLGDEDTVQLFAKIARIHFALKPYIQSLVEEASKTGLPVVRHNAIVEPEDKIL ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEECCCCCEE LQYKYQFFLGDDLLVAPVVESNEIVQEVYLPRGKWSHIWTGTNFEGNRKIQVSAPIGKPP EEEEEEEEECCCEEEEEECCCHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEECCCCCCC AFIRVGGKSEMLIRSSLESIRNKQ CEEEECCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MVFRFLSLCSLFFFLECASHVLTPIPITEETYQVSKQIQWIQTPNKLILKNTSFDRNFIE CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCEEEEECCCCCCCEEE LSLNEPFLTVSEVNTISKYRMASFKFEESTKRTCSEQTVDSIKKETGKITIQGKLSGKNC EECCCCEEEHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCC VTNYQVLFLTKSDTELEFKITVSDETLNRIHLVYASHPEEKIFGLGEQFTYDEFKGKKPF EEEEEEEEEEECCCEEEEEEEECCCCCCEEEEEEECCCHHHHHCCCCCCCHHHHCCCCCE FFTEEQGIGRGDQPITAGANLLAGAGGNAYTTYAPIPHYISSENRSVFFENSGYAKFDFS EEECCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCHHHCCCCCEEEEECCCEEEEECC DARKTKVEFWDFQSEKSVTGTIWLASSAKSLIETYTKKTGRFPKLPDWAYGTWLGIQGGT CCCCCEEEEEECCCCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCH EKVTTIVKQAKAAGNPVTALWIQDWCGRRVTNFGDQLKWRWYADETLYPDFKKFVKSMND HHHHHHHHHHHHCCCCEEEEEEHHHCCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCC ENVQVLGYINSFLADTDPKKPGDDFTNPLLTEAKSKGYLVKNEKGEDYLIQTVGFPAYLI CCEEEEEEHHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCEEEEECCCCEEEE DLTNPAAVKWTKDLIKKNLIGMGLSGWMADFGEWLPYDAKLHSGVDAKIYHNRYPVDWAR ECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHCCCCCEEEECCCCCCHHHH INREAIKESGMEGKIVFFTRAGYSYSNAHSTLFWEGDQMVSFGTNDGLPSSIVGLTTSGI HCHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEECCCEEEEECCCCCCCCHHHEEEECCC SGYALNHSDIGGYTTISNPLKNYHRTKEVLLRWAEVSAFTPVFRTHEGNRPLKNWQVYTY CCEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEEE TKPDGTKSLGDEDTVQLFAKIARIHFALKPYIQSLVEEASKTGLPVVRHNAIVEPEDKIL ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEECCCCCEE LQYKYQFFLGDDLLVAPVVESNEIVQEVYLPRGKWSHIWTGTNFEGNRKIQVSAPIGKPP EEEEEEEEECCCEEEEEECCCHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEECCCCCCC AFIRVGGKSEMLIRSSLESIRNKQ CEEEECCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]