| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222513
Identifier: 183222513
GI number: 183222513
Start: 3281400
End: 3282062
Strand: Direct
Name: 183222513
Synonym: LEPBI_I3168
Alternate gene names: NA
Gene position: 3281400-3282062 (Clockwise)
Preceding gene: 183222512
Following gene: 183222520
Centisome position: 91.16
GC content: 37.41
Gene sequence:
>663_bases ATGAAACAAATAAATTTCATAATCGCTTGTATTCTGATATTCTTAGTGAACTGCGGAACAAGTGCATTGCGTTTCCAAAA GACAAATAAATTCAATCCAAATGTGAAAAATGTCATTACAATGGCTGTATTTGACATGAGCACAAATAGTGTGGCAGATT CCAATGACGAAGTTTTAAAAACTTTTGGAAGCATTTCCCAAGCCAAAGTGGGAGAAATTTACGGTAACCTAATTCCTGGT GGAGATTTGACTGTAAAAGCAGCCGAAACACTTGGAATCAAAAAAGACTTAGATACTGCGATGGGAAAAATCACAGAAGC AATTGTGAATTCCAATTCCTTAGATCCTAAAACAACAGAAGTTTTTGCAAAACTGGCAGAATACTTAAAGGTAGAAGCCC TTGCGTTTCCATTGGCTTCCGGTGGAAAATCAACCATGGAAAGCCAAGGAATCACATTCCGTTTTGTTCTTTATGATACA AAAAACCCAGGTATCCAATATTGGGCAGAAGTGGATGCTGTCACCATCAATGCATTGAGCCTCAAAGCAGCGCCAGATGA TAAAGCAAAAACGGCACTGTATGTTGCATCTGCTACCAAAGGTATTAACGCTTTATATTCAGGAATCAGTTCTGAAATTG AGAAAGCAAAAAATCCAAAATAA
Upstream 100 bases:
>100_bases TAATTCGGCAGATCTTGACCCAATCCATTCCTTTTTTTTAAATTTATGCAATAATTCCTGTTTGTTGGTCAATTGTTATA TGACCAAAGGATGGTAATCA
Downstream 100 bases:
>100_bases TAAACTGAGTCAAACAACCTATCGAAAGAATTCTTCATCTTTAGGTTGTTTTTTGTGTTAGTAAAAACGTTTCAAACCGT TGGATTTACATTCCAACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MKQINFIIACILIFLVNCGTSALRFQKTNKFNPNVKNVITMAVFDMSTNSVADSNDEVLKTFGSISQAKVGEIYGNLIPG GDLTVKAAETLGIKKDLDTAMGKITEAIVNSNSLDPKTTEVFAKLAEYLKVEALAFPLASGGKSTMESQGITFRFVLYDT KNPGIQYWAEVDAVTINALSLKAAPDDKAKTALYVASATKGINALYSGISSEIEKAKNPK
Sequences:
>Translated_220_residues MKQINFIIACILIFLVNCGTSALRFQKTNKFNPNVKNVITMAVFDMSTNSVADSNDEVLKTFGSISQAKVGEIYGNLIPG GDLTVKAAETLGIKKDLDTAMGKITEAIVNSNSLDPKTTEVFAKLAEYLKVEALAFPLASGGKSTMESQGITFRFVLYDT KNPGIQYWAEVDAVTINALSLKAAPDDKAKTALYVASATKGINALYSGISSEIEKAKNPK >Mature_220_residues MKQINFIIACILIFLVNCGTSALRFQKTNKFNPNVKNVITMAVFDMSTNSVADSNDEVLKTFGSISQAKVGEIYGNLIPG GDLTVKAAETLGIKKDLDTAMGKITEAIVNSNSLDPKTTEVFAKLAEYLKVEALAFPLASGGKSTMESQGITFRFVLYDT KNPGIQYWAEVDAVTINALSLKAAPDDKAKTALYVASATKGINALYSGISSEIEKAKNPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23616; Mature: 23616
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQINFIIACILIFLVNCGTSALRFQKTNKFNPNVKNVITMAVFDMSTNSVADSNDEVLK CCHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCHHHEEEEEEEECCCCCCCCCCHHHHH TFGSISQAKVGEIYGNLIPGGDLTVKAAETLGIKKDLDTAMGKITEAIVNSNSLDPKTTE HHHCHHHHHHHHHHCCCCCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHH VFAKLAEYLKVEALAFPLASGGKSTMESQGITFRFVLYDTKNPGIQYWAEVDAVTINALS HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEEEEECCCCCEEEEEEECEEEEEEEE LKAAPDDKAKTALYVASATKGINALYSGISSEIEKAKNPK EECCCCCCHHEEEEEEHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKQINFIIACILIFLVNCGTSALRFQKTNKFNPNVKNVITMAVFDMSTNSVADSNDEVLK CCHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCHHHEEEEEEEECCCCCCCCCCHHHHH TFGSISQAKVGEIYGNLIPGGDLTVKAAETLGIKKDLDTAMGKITEAIVNSNSLDPKTTE HHHCHHHHHHHHHHCCCCCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHH VFAKLAEYLKVEALAFPLASGGKSTMESQGITFRFVLYDTKNPGIQYWAEVDAVTINALS HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEEEEECCCCCEEEEEEECEEEEEEEE LKAAPDDKAKTALYVASATKGINALYSGISSEIEKAKNPK EECCCCCCHHEEEEEEHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA