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The map label for this gene is ribF [H]

Identifier: 183222424

GI number: 183222424

Start: 3188901

End: 3189830

Strand: Reverse

Name: ribF [H]

Synonym: LEPBI_I3078

Alternate gene names: 183222424

Gene position: 3189830-3188901 (Counterclockwise)

Preceding gene: 183222426

Following gene: 183222417

Centisome position: 88.61

GC content: 40.11

Gene sequence:

>930_bases
TTGAAAATTATTCGCTCTTTAGAATCGATCCAAAATGAATTCCGAAACGGTTCCTCATTGACCCTAGGGAATTTTGACGG
AATCCATGTCGGCCACCAAACACTTTTGTTGCGGACTGTGGAAAAAGCAAAGGAACTTGGGATCCCTTCCGTTGTTGTCA
CCTACTATCCAAACCCATCCGTCGTACTTGGAAAAAAACCAAACTTCAAATACCTTTCTTCGGAACGAGAAAAAGAAGAA
CTGATCCGTGGGTTTGGTATTGATTATTTACTCGTATTAGATTTTACCTTGGAACTTTCTAAAATGACTGCCGAAGATTT
TTTAGAAAACATCATGATCCAAACCTTAAATGCAAAACACATTGTCATTGGTTATAATCATTTTTTTGGTGCAGAACGTC
GTGGTGATTTTACACTCCTAAATTCCAACAAATCTAAGTATGGTTATGCGGTGGAACTAAGAGAAGCGGTCTTAAAAAAA
GACAGTAAAATTTCTTCCTCTCTCATACGTGGGTTTCTAGACAAAGGAGAGATGGAAGAGGCAAAAATCCTACTTGGTCG
AAACTACCATATCACAGGCACTGTCATAGAAGGTGCCAAACGGGGGCGCACCATTGGATTCCCAACTGCCAATTTACAAG
TTCCCAGTGACAAACTCCTCCCGTCCGTTGGCGTGTATGCCTGTTTTGTCAAATTGGATGGCAAAGACCATCAAGGCATG
GTCAATATAGGGTTTAATCCCACCTTTGATGGGTTAGGTTTGCATGTGGAGGTGAACCTATTTGATTTTGATGGCAATTT
ATATGGCAAAGAAATCGAATTGGAAATGGTAAAAAAAATCCGAGACGAACAAAAGTTTGACGGAATTGAAGCCCTAAAGG
CCCAACTCACAATCGACAAAGAAACGAGTTTGCAAATTTTACAGTTTTAG

Upstream 100 bases:

>100_bases
GTGTACCTATGGTTGATAAAAAGATTGCCGTAAGGAGAAGGATTCGTAGTTTCAATGGTAACACCTATTCCAAGTATCGG
ATTACGAGACAAGTCCCCCT

Downstream 100 bases:

>100_bases
TCCGAATTCGACGTTTCGAAAAACTAAAGTGCGGTGCACTGAGAGTTATAATTTGATGATGTGATAGAGTTTGCCTTTGC
GTTTGATTTTTCCAAGGATT

Product: riboflavin biosynthesis protein RibF

Products: NA

Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKIIRSLESIQNEFRNGSSLTLGNFDGIHVGHQTLLLRTVEKAKELGIPSVVVTYYPNPSVVLGKKPNFKYLSSEREKEE
LIRGFGIDYLLVLDFTLELSKMTAEDFLENIMIQTLNAKHIVIGYNHFFGAERRGDFTLLNSNKSKYGYAVELREAVLKK
DSKISSSLIRGFLDKGEMEEAKILLGRNYHITGTVIEGAKRGRTIGFPTANLQVPSDKLLPSVGVYACFVKLDGKDHQGM
VNIGFNPTFDGLGLHVEVNLFDFDGNLYGKEIELEMVKKIRDEQKFDGIEALKAQLTIDKETSLQILQF

Sequences:

>Translated_309_residues
MKIIRSLESIQNEFRNGSSLTLGNFDGIHVGHQTLLLRTVEKAKELGIPSVVVTYYPNPSVVLGKKPNFKYLSSEREKEE
LIRGFGIDYLLVLDFTLELSKMTAEDFLENIMIQTLNAKHIVIGYNHFFGAERRGDFTLLNSNKSKYGYAVELREAVLKK
DSKISSSLIRGFLDKGEMEEAKILLGRNYHITGTVIEGAKRGRTIGFPTANLQVPSDKLLPSVGVYACFVKLDGKDHQGM
VNIGFNPTFDGLGLHVEVNLFDFDGNLYGKEIELEMVKKIRDEQKFDGIEALKAQLTIDKETSLQILQF
>Mature_309_residues
MKIIRSLESIQNEFRNGSSLTLGNFDGIHVGHQTLLLRTVEKAKELGIPSVVVTYYPNPSVVLGKKPNFKYLSSEREKEE
LIRGFGIDYLLVLDFTLELSKMTAEDFLENIMIQTLNAKHIVIGYNHFFGAERRGDFTLLNSNKSKYGYAVELREAVLKK
DSKISSSLIRGFLDKGEMEEAKILLGRNYHITGTVIEGAKRGRTIGFPTANLQVPSDKLLPSVGVYACFVKLDGKDHQGM
VNIGFNPTFDGLGLHVEVNLFDFDGNLYGKEIELEMVKKIRDEQKFDGIEALKAQLTIDKETSLQILQF

Specific function: Unknown

COG id: COG0196

COG function: function code H; FAD synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribF family [H]

Homologues:

Organism=Escherichia coli, GI1786208, Length=304, Percent_Identity=35.1973684210526, Blast_Score=194, Evalue=8e-51,
Organism=Caenorhabditis elegans, GI17541882, Length=116, Percent_Identity=34.4827586206897, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004821
- InterPro:   IPR015864
- InterPro:   IPR015865
- InterPro:   IPR002606
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]

EC number: =2.7.1.26; =2.7.7.2 [H]

Molecular weight: Translated: 34758; Mature: 34758

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIRSLESIQNEFRNGSSLTLGNFDGIHVGHQTLLLRTVEKAKELGIPSVVVTYYPNPS
CHHHHHHHHHHHHHCCCCEEEECCCCCEEECHHHHHHHHHHHHHHCCCCEEEEEECCCCC
VVLGKKPNFKYLSSEREKEELIRGFGIDYLLVLDFTLELSKMTAEDFLENIMIQTLNAKH
EEEECCCCCHHHCCCHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCE
IVIGYNHFFGAERRGDFTLLNSNKSKYGYAVELREAVLKKDSKISSSLIRGFLDKGEMEE
EEEEEHHHCCCCCCCCEEEEECCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
AKILLGRNYHITGTVIEGAKRGRTIGFPTANLQVPSDKLLPSVGVYACFVKLDGKDHQGM
EEEEECCCEEEEEEEEECCCCCCEECCCCCCEECCHHHCCCCCCEEEEEEEECCCCCCCE
VNIGFNPTFDGLGLHVEVNLFDFDGNLYGKEIELEMVKKIRDEQKFDGIEALKAQLTIDK
EEECCCCCCCCEEEEEEEEEEEECCCCCCCEEHHHHHHHHHHHHHCCCHHHHEEEEEECC
ETSLQILQF
CCCEEEECC
>Mature Secondary Structure
MKIIRSLESIQNEFRNGSSLTLGNFDGIHVGHQTLLLRTVEKAKELGIPSVVVTYYPNPS
CHHHHHHHHHHHHHCCCCEEEECCCCCEEECHHHHHHHHHHHHHHCCCCEEEEEECCCCC
VVLGKKPNFKYLSSEREKEELIRGFGIDYLLVLDFTLELSKMTAEDFLENIMIQTLNAKH
EEEECCCCCHHHCCCHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCE
IVIGYNHFFGAERRGDFTLLNSNKSKYGYAVELREAVLKKDSKISSSLIRGFLDKGEMEE
EEEEEHHHCCCCCCCCEEEEECCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
AKILLGRNYHITGTVIEGAKRGRTIGFPTANLQVPSDKLLPSVGVYACFVKLDGKDHQGM
EEEEECCCEEEEEEEEECCCCCCEECCCCCCEECCHHHCCCCCCEEEEEEEECCCCCCCE
VNIGFNPTFDGLGLHVEVNLFDFDGNLYGKEIELEMVKKIRDEQKFDGIEALKAQLTIDK
EEECCCCCCCCEEEEEEEEEEEECCCCCCCEEHHHHHHHHHHHHHCCCHHHHEEEEEECC
ETSLQILQF
CCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]