| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222397
Identifier: 183222397
GI number: 183222397
Start: 3163199
End: 3164839
Strand: Reverse
Name: 183222397
Synonym: LEPBI_I3051
Alternate gene names: NA
Gene position: 3164839-3163199 (Counterclockwise)
Preceding gene: 183222403
Following gene: 183222394
Centisome position: 87.92
GC content: 39.12
Gene sequence:
>1641_bases ATGAAAACGATTTTAACCTGCTCCAATTGTCTCAGTGGTCATTCCATTTCTTCATCCAAATTGGAAGGCAAAAAAGGAAA GTACCGGTGTAAAAAATGTTCCATTTGGAATCATTTTGATTTCCGAAAGAACCAAGCCGAAGAAAGATCCGACTCACTCG TGTTATTCGACCTTAATTTTTTAGGCCAAATTCCAAATCATACCTTACAAGGACAAATTTTCGGTCGTTATACGACTCAT TTTGTTTCCGACTGGTCCAATGAAGAACTTGTTTTTCTCAAAGACGAAGAAGGTAACGATGATGACGTTCGAATTTCCAT CTCAGGTCTTCCCGAAATGATCAGGCTCAAAAATTTTGTTTATGACATCACAACAGAATCCCCATCCAAAACACTCAGCA TCATCATCAATCATAATGTGAATACGGCACCAGTTCGATTATCCTTAACTGTTGAAGGCATTGACCATGCTTTGGTGAAT GGGAAATTGTATTTGGCAATCTCTGATGAATGGAATACATTTTTACATGGAAGTTTTACCGCTACTCATGTTTACAAAAT TGAATTTGATGAATACGGTGTGGCAAACAAAGAACTTCCCGATTTTATCACAAATTTTTTGGCCGCAAAAATTTATGCAT TGTCAGGCAATATTTTGTCCTTACAAAAACATTTCCCAGAGCTGAGTGAAAAAGAAAAAGACGAACTTCTGAGTTTGGTG GTCTATCATTGGCCAGAAAACCAAACCACTGTTTCCGAAGTTCATTTTAAAGAAGGGAATATCCAAGCAAAATTCCAAAT CACACAAAAGAAACTCAACGAATCCTTTATCTTTTTGATTTCCAATCAATTACATCCAAATGCAGAACATTGGCATATCA TCCACGATGTGGTTTGCCATTCAGAAGTGGAACCTATGTTCATTCCACTTCTCAAAACCAAATTTCCAGAGGAATACCAC AAACATCTTGGAAATCAATTGGAAACAAAAAACGATGACCAAACCTTAGATTGGTTAGACGAGGATGATGTGTATTTATT GGATTCCTTTGTCCGATCAGTAGGATCTTTAGATTATATCATCAAAGATTCGATCCGAAACCCACTCGGGTTCACTTTAC TACAAGAAGCTTTTGTTCGATCCAAATACAAGTCGTGTATGCGTTTATTAGAACGAGGAGCTAATCCCAATATAGTTGAT GCCAATGGTGAGACTGCCATTTTTAAATTATGCCAAGATAACAAACTGCGATTGCAAGAAAAAACGCAACTTATGGATGA ACTGATCCGACGAGGGGCCAAGGTCAACTTACAATCCGTGAATGGAATGACACCTCTCCATTGGTGTTCGGTGTTTGGCG AACCGAGTATGGCCAAACGACTCATCCAAGCAGGGATCGATATCCACACTGCTGATCAAGTGGGTAGCACTGCCCTTCAT GAGGCATGTAAGTTTGGAAATTCTTCCGTCCTTGCCTTACTACTCGAATCTGGTGCGAAGGCAAATGCCAAAACATTGGA AGAAAAAACAGGAAGGGATTTGGCTTTCGAAAACTTGGAAATTGCGGATTTGGAAGCAGACGAAGAGAAAAAAAACCGCT ACCAAAGGGTTCTTTCTCTCTTAGATGTGTATGGTGGCTAA
Upstream 100 bases:
>100_bases TGATTTTGTCCCATGAATCCCTACCTGAATGTTTTAAAGGTTCTAATTTTCGATTGATCATGGTAAAGTCTCTTGGATTC TATATCGGAACAAGCGAAAT
Downstream 100 bases:
>100_bases AAACCAACTCGTCTGGTTTGGAAACCACGGACAAGGAAATACAAAACAAGTCCCACAGGACCATAATAGAAGGTAAGTCC ATGGATCGGAACTAAAACCA
Product: putative ankyrin-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 546; Mature: 546
Protein sequence:
>546_residues MKTILTCSNCLSGHSISSSKLEGKKGKYRCKKCSIWNHFDFRKNQAEERSDSLVLFDLNFLGQIPNHTLQGQIFGRYTTH FVSDWSNEELVFLKDEEGNDDDVRISISGLPEMIRLKNFVYDITTESPSKTLSIIINHNVNTAPVRLSLTVEGIDHALVN GKLYLAISDEWNTFLHGSFTATHVYKIEFDEYGVANKELPDFITNFLAAKIYALSGNILSLQKHFPELSEKEKDELLSLV VYHWPENQTTVSEVHFKEGNIQAKFQITQKKLNESFIFLISNQLHPNAEHWHIIHDVVCHSEVEPMFIPLLKTKFPEEYH KHLGNQLETKNDDQTLDWLDEDDVYLLDSFVRSVGSLDYIIKDSIRNPLGFTLLQEAFVRSKYKSCMRLLERGANPNIVD ANGETAIFKLCQDNKLRLQEKTQLMDELIRRGAKVNLQSVNGMTPLHWCSVFGEPSMAKRLIQAGIDIHTADQVGSTALH EACKFGNSSVLALLLESGAKANAKTLEEKTGRDLAFENLEIADLEADEEKKNRYQRVLSLLDVYGG
Sequences:
>Translated_546_residues MKTILTCSNCLSGHSISSSKLEGKKGKYRCKKCSIWNHFDFRKNQAEERSDSLVLFDLNFLGQIPNHTLQGQIFGRYTTH FVSDWSNEELVFLKDEEGNDDDVRISISGLPEMIRLKNFVYDITTESPSKTLSIIINHNVNTAPVRLSLTVEGIDHALVN GKLYLAISDEWNTFLHGSFTATHVYKIEFDEYGVANKELPDFITNFLAAKIYALSGNILSLQKHFPELSEKEKDELLSLV VYHWPENQTTVSEVHFKEGNIQAKFQITQKKLNESFIFLISNQLHPNAEHWHIIHDVVCHSEVEPMFIPLLKTKFPEEYH KHLGNQLETKNDDQTLDWLDEDDVYLLDSFVRSVGSLDYIIKDSIRNPLGFTLLQEAFVRSKYKSCMRLLERGANPNIVD ANGETAIFKLCQDNKLRLQEKTQLMDELIRRGAKVNLQSVNGMTPLHWCSVFGEPSMAKRLIQAGIDIHTADQVGSTALH EACKFGNSSVLALLLESGAKANAKTLEEKTGRDLAFENLEIADLEADEEKKNRYQRVLSLLDVYGG >Mature_546_residues MKTILTCSNCLSGHSISSSKLEGKKGKYRCKKCSIWNHFDFRKNQAEERSDSLVLFDLNFLGQIPNHTLQGQIFGRYTTH FVSDWSNEELVFLKDEEGNDDDVRISISGLPEMIRLKNFVYDITTESPSKTLSIIINHNVNTAPVRLSLTVEGIDHALVN GKLYLAISDEWNTFLHGSFTATHVYKIEFDEYGVANKELPDFITNFLAAKIYALSGNILSLQKHFPELSEKEKDELLSLV VYHWPENQTTVSEVHFKEGNIQAKFQITQKKLNESFIFLISNQLHPNAEHWHIIHDVVCHSEVEPMFIPLLKTKFPEEYH KHLGNQLETKNDDQTLDWLDEDDVYLLDSFVRSVGSLDYIIKDSIRNPLGFTLLQEAFVRSKYKSCMRLLERGANPNIVD ANGETAIFKLCQDNKLRLQEKTQLMDELIRRGAKVNLQSVNGMTPLHWCSVFGEPSMAKRLIQAGIDIHTADQVGSTALH EACKFGNSSVLALLLESGAKANAKTLEEKTGRDLAFENLEIADLEADEEKKNRYQRVLSLLDVYGG
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 18 ANK repeats [H]
Homologues:
Organism=Homo sapiens, GI32967601, Length=128, Percent_Identity=30.46875, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI116875852, Length=122, Percent_Identity=32.7868852459016, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI70780355, Length=122, Percent_Identity=33.6065573770492, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI70780359, Length=122, Percent_Identity=33.6065573770492, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI87239981, Length=152, Percent_Identity=32.8947368421053, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI70780357, Length=122, Percent_Identity=33.6065573770492, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI70780353, Length=122, Percent_Identity=33.6065573770492, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI215598574, Length=122, Percent_Identity=33.6065573770492, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI103471993, Length=163, Percent_Identity=30.6748466257669, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI52426737, Length=145, Percent_Identity=30.3448275862069, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI188595682, Length=145, Percent_Identity=30.3448275862069, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI52426735, Length=128, Percent_Identity=31.25, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI13376842, Length=192, Percent_Identity=31.7708333333333, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI161082110, Length=141, Percent_Identity=31.2056737588652, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI161082089, Length=159, Percent_Identity=29.559748427673, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI161082096, Length=141, Percent_Identity=31.2056737588652, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI161082099, Length=146, Percent_Identity=30.8219178082192, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI161082081, Length=141, Percent_Identity=31.2056737588652, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI161082106, Length=141, Percent_Identity=31.2056737588652, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI161082085, Length=146, Percent_Identity=30.8219178082192, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI281359521, Length=117, Percent_Identity=35.042735042735, Blast_Score=66, Evalue=8e-11, Organism=Drosophila melanogaster, GI281359519, Length=117, Percent_Identity=35.042735042735, Blast_Score=66, Evalue=8e-11, Organism=Drosophila melanogaster, GI28558752, Length=117, Percent_Identity=35.042735042735, Blast_Score=66, Evalue=8e-11, Organism=Drosophila melanogaster, GI28558750, Length=117, Percent_Identity=35.042735042735, Blast_Score=66, Evalue=8e-11, Organism=Drosophila melanogaster, GI28558756, Length=117, Percent_Identity=35.042735042735, Blast_Score=66, Evalue=8e-11, Organism=Drosophila melanogaster, GI28558754, Length=117, Percent_Identity=35.042735042735, Blast_Score=66, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002110 - InterPro: IPR020683 - InterPro: IPR007685 [H]
Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]
EC number: NA
Molecular weight: Translated: 62115; Mature: 62115
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTILTCSNCLSGHSISSSKLEGKKGKYRCKKCSIWNHFDFRKNQAEERSDSLVLFDLNF CCCEEEHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCEEEEEHHH LGQIPNHTLQGQIFGRYTTHFVSDWSNEELVFLKDEEGNDDDVRISISGLPEMIRLKNFV HCCCCCCCCCCEEEEHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHE YDITTESPSKTLSIIINHNVNTAPVRLSLTVEGIDHALVNGKLYLAISDEWNTFLHGSFT EEEECCCCCCEEEEEEECCCCCCEEEEEEEECCCCEEEECCEEEEEECCCCCEEEECCEE ATHVYKIEFDEYGVANKELPDFITNFLAAKIYALSGNILSLQKHFPELSEKEKDELLSLV EEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHEECCCEEEHHHHCCCCCHHHHHHHHEEE VYHWPENQTTVSEVHFKEGNIQAKFQITQKKLNESFIFLISNQLHPNAEHWHIIHDVVCH EEECCCCCCCCEEEEEECCCEEEEEEEEHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHC SEVEPMFIPLLKTKFPEEYHKHLGNQLETKNDDQTLDWLDEDDVYLLDSFVRSVGSLDYI CCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHH IKDSIRNPLGFTLLQEAFVRSKYKSCMRLLERGANPNIVDANGETAIFKLCQDNKLRLQE HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCCCHHHH KTQLMDELIRRGAKVNLQSVNGMTPLHWCSVFGEPSMAKRLIQAGIDIHTADQVGSTALH HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCHHHHHHHHHCCCCEEEHHHHCHHHHH EACKFGNSSVLALLLESGAKANAKTLEEKTGRDLAFENLEIADLEADEEKKNRYQRVLSL HHHHCCCCHHHHHEECCCCCCCHHHHHHHCCCCEEECCCEEEECCCCHHHHHHHHHHHHH LDVYGG HHHCCC >Mature Secondary Structure MKTILTCSNCLSGHSISSSKLEGKKGKYRCKKCSIWNHFDFRKNQAEERSDSLVLFDLNF CCCEEEHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCEEEEEHHH LGQIPNHTLQGQIFGRYTTHFVSDWSNEELVFLKDEEGNDDDVRISISGLPEMIRLKNFV HCCCCCCCCCCEEEEHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHE YDITTESPSKTLSIIINHNVNTAPVRLSLTVEGIDHALVNGKLYLAISDEWNTFLHGSFT EEEECCCCCCEEEEEEECCCCCCEEEEEEEECCCCEEEECCEEEEEECCCCCEEEECCEE ATHVYKIEFDEYGVANKELPDFITNFLAAKIYALSGNILSLQKHFPELSEKEKDELLSLV EEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHEECCCEEEHHHHCCCCCHHHHHHHHEEE VYHWPENQTTVSEVHFKEGNIQAKFQITQKKLNESFIFLISNQLHPNAEHWHIIHDVVCH EEECCCCCCCCEEEEEECCCEEEEEEEEHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHC SEVEPMFIPLLKTKFPEEYHKHLGNQLETKNDDQTLDWLDEDDVYLLDSFVRSVGSLDYI CCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHH IKDSIRNPLGFTLLQEAFVRSKYKSCMRLLERGANPNIVDANGETAIFKLCQDNKLRLQE HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCCCHHHH KTQLMDELIRRGAKVNLQSVNGMTPLHWCSVFGEPSMAKRLIQAGIDIHTADQVGSTALH HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCHHHHHHHHHCCCCEEEHHHHCHHHHH EACKFGNSSVLALLLESGAKANAKTLEEKTGRDLAFENLEIADLEADEEKKNRYQRVLSL HHHHCCCCHHHHHEECCCCCCCHHHHHHHCCCCEEECCCEEEECCCCHHHHHHHHHHHHH LDVYGG HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA