| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is cya [H]
Identifier: 183222292
GI number: 183222292
Start: 3043958
End: 3046078
Strand: Reverse
Name: cya [H]
Synonym: LEPBI_I2944
Alternate gene names: 183222292
Gene position: 3046078-3043958 (Counterclockwise)
Preceding gene: 183222293
Following gene: 183222291
Centisome position: 84.62
GC content: 37.06
Gene sequence:
>2121_bases TTGATATTAGTAAACTTTCTTTTCTTTTGTTTGGCGTTAGTTTCGTGTAACTTTGATAATACGAAAGTTGCAAAAAAAGG ATATTTGGAAATTCCAGAAGTATTTGTGGAAAACCACAAAAAAATTTCATTGAATGGAGAATGGGAATTTTATTGGAACG AGATTTATGGCGATGCCTTATTCCAAAAAATAGCGGAAAAGAAACAAACTTACGTTAACGTTCCTTCATCTTGGAACTCT GTTCGGCCAGAAGGAATCGGTGGGGATGGGTATGCCAGCTTTCGTTTAGTTGTTAAAGTTCCAGATCCTAACATTCGTTA TTATTTGAGAGTGCAACCTGCAACCAGTGCTTATGAATTGTACATCAATCGGCAAAAAATTGCTTATTCAGGGGTCATTG GTGTGGATCAATTGTCCGCAAAACCAAAATACCAAATTCAATATGTTTCGTTCCAACCTGAATCTTATGAACAAGAAATC ATTTATGTTGTCAGTAATTTCCATCATGCTCGCGGTGGTTATCGCAAACCCATTGAAATGGGTACAAAAGAAGTCATCCA AAACGAGTCACTCATATATTCGGCTGGTGAAGTATTTGTGTTCGGTGCTATGCTCACGATGGCATTGTACCAACTCACTG TTTTTTTCTTCCGTAGGCAGGAGAAAAGTTCACTGTTTTTTGCTCTCTTTTGTTTGTTCACAGGCCTTCGCTTAGTTATA TTAGATAATTATTACATAGTATATGCGTTTCCCGATTTTTCATGGAAATGGATGCAAGTATTGGATTATTCTTCGGCACC ACTGCTTGTTTGTTTTTTCTTAAGTTATTTACGCAGTTTGTTTCCTGGAAAATCAGAAGTACCCAATTGGATGTTACAAT CTTGTTGGAGTTTGAGTTTTACATATGTATTATTTGTCTTACTCACAGATCCGAAACTCTTTACAACGACCAATATTGTT TCGCAGGTTTTTATCTTATTTTTTAGTATCTGCTCCTTTTATGTGATCTTTCGTATCTATCGCCAAAGGAAACGAGATAG TAGTTTAGTTTTTTATGGTTCACTCATTTTGATGTTGGGTTCGACACATGATTTGATGGCAGGGAATTATTGGTTCCAAG CCCAACCCCTTATGCCATTTTCATTATTTGTATTCTTTTTGTTCCAAAGTATTCTACTTGCGAGAAGGAATGCTCGTTTT TATTCCTCGATGGATACTTTAACAACAGAATTAATTGAAGTAAACAATCGACTTGAATCATCTAACAAAGTTTATGCAAA ATTTGTACCCTTACGACTCATCCAATTGTTTTCCAAAAAAGATGAATCAAAAGTCAAACGTGGAGATTTTATCCTAAAAC ACATGTCAGTATTGTCGTCTGATATTCGTGATTTTACAGCAATCTCGGAAACGCTTAGTCCAGAGGAAACATTTCTTTTT TTGAATGATTATCTCAGACAAGTTGGGCCTATCATTCGTTCTCAAAATGGATTTATCGAAAAGTATGTTGGTGATGCCAT CTTTGCATTGTTTGAAAAAGAACCAGAAGATGCACTTTCGGCAGCGATTCAAATGCACAAAACGATTGCGAATTGGAACA AAGAAAGTCACAACCATCGTGTTGGGGAAATCCAAATCGGTGTTGGAATCCATTTTGGTGAATTGATGTTAGGAATTGTT GGGGAAGAACAAAGAATTGAATCCGCAGTACTTTCCGATTCCATGGGAGTTGCCAATTCCTTAGAATCAATGACGAAAAA ATATGGGGCAAAAATCATTCTTAGTTTAGATGCACTTTTAGAATTAAAAGAACCGGATTCTTATCCGCATCGACTTTTGG ATTTTATTAAAATTCCCGCAAAACAAAAGTTAATCGGAATTGCACAAGTTTTAGTGGAGGGGGTCGAAGAATCCTTTCAG CTCAAGATCCAAACCAAAGAAGAATTTGAAGAAAGTGTGAATTTGTTTTGGGATGGGGACTTTCGGGCAGCGGAGCTTGG ATTTTCATCAGTTTTGAATCGAGACCCTTCCGACAAGGCAGCCCTTCTGTATTTGGAACGATCCCAACAATACCTCCAAA ATGGACCTCCTCCTGGGTTTGGAAAGGGATTTTTGGCATAA
Upstream 100 bases:
>100_bases AAATCTATATTGAAAGGTGTGAATACTACCAAACTGCCGGCGTTGGCGAAGATTGGGATGGGGTTTCTGCATGGGAAAAA TAAAACCAATCCTAAATCAT
Downstream 100 bases:
>100_bases AAAAGACATAGAATCGCCTAGGTTTTTGAAAAAGTTCTTGAATTTCCTCTCTAACTGAACGAGAGTCAGTAATACGGAGA TTCCCATGACCCAAGCCACT
Product: putative adenylate/guanylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase; Adenylyl cyclase [H]
Number of amino acids: Translated: 706; Mature: 706
Protein sequence:
>706_residues MILVNFLFFCLALVSCNFDNTKVAKKGYLEIPEVFVENHKKISLNGEWEFYWNEIYGDALFQKIAEKKQTYVNVPSSWNS VRPEGIGGDGYASFRLVVKVPDPNIRYYLRVQPATSAYELYINRQKIAYSGVIGVDQLSAKPKYQIQYVSFQPESYEQEI IYVVSNFHHARGGYRKPIEMGTKEVIQNESLIYSAGEVFVFGAMLTMALYQLTVFFFRRQEKSSLFFALFCLFTGLRLVI LDNYYIVYAFPDFSWKWMQVLDYSSAPLLVCFFLSYLRSLFPGKSEVPNWMLQSCWSLSFTYVLFVLLTDPKLFTTTNIV SQVFILFFSICSFYVIFRIYRQRKRDSSLVFYGSLILMLGSTHDLMAGNYWFQAQPLMPFSLFVFFLFQSILLARRNARF YSSMDTLTTELIEVNNRLESSNKVYAKFVPLRLIQLFSKKDESKVKRGDFILKHMSVLSSDIRDFTAISETLSPEETFLF LNDYLRQVGPIIRSQNGFIEKYVGDAIFALFEKEPEDALSAAIQMHKTIANWNKESHNHRVGEIQIGVGIHFGELMLGIV GEEQRIESAVLSDSMGVANSLESMTKKYGAKIILSLDALLELKEPDSYPHRLLDFIKIPAKQKLIGIAQVLVEGVEESFQ LKIQTKEEFEESVNLFWDGDFRAAELGFSSVLNRDPSDKAALLYLERSQQYLQNGPPPGFGKGFLA
Sequences:
>Translated_706_residues MILVNFLFFCLALVSCNFDNTKVAKKGYLEIPEVFVENHKKISLNGEWEFYWNEIYGDALFQKIAEKKQTYVNVPSSWNS VRPEGIGGDGYASFRLVVKVPDPNIRYYLRVQPATSAYELYINRQKIAYSGVIGVDQLSAKPKYQIQYVSFQPESYEQEI IYVVSNFHHARGGYRKPIEMGTKEVIQNESLIYSAGEVFVFGAMLTMALYQLTVFFFRRQEKSSLFFALFCLFTGLRLVI LDNYYIVYAFPDFSWKWMQVLDYSSAPLLVCFFLSYLRSLFPGKSEVPNWMLQSCWSLSFTYVLFVLLTDPKLFTTTNIV SQVFILFFSICSFYVIFRIYRQRKRDSSLVFYGSLILMLGSTHDLMAGNYWFQAQPLMPFSLFVFFLFQSILLARRNARF YSSMDTLTTELIEVNNRLESSNKVYAKFVPLRLIQLFSKKDESKVKRGDFILKHMSVLSSDIRDFTAISETLSPEETFLF LNDYLRQVGPIIRSQNGFIEKYVGDAIFALFEKEPEDALSAAIQMHKTIANWNKESHNHRVGEIQIGVGIHFGELMLGIV GEEQRIESAVLSDSMGVANSLESMTKKYGAKIILSLDALLELKEPDSYPHRLLDFIKIPAKQKLIGIAQVLVEGVEESFQ LKIQTKEEFEESVNLFWDGDFRAAELGFSSVLNRDPSDKAALLYLERSQQYLQNGPPPGFGKGFLA >Mature_706_residues MILVNFLFFCLALVSCNFDNTKVAKKGYLEIPEVFVENHKKISLNGEWEFYWNEIYGDALFQKIAEKKQTYVNVPSSWNS VRPEGIGGDGYASFRLVVKVPDPNIRYYLRVQPATSAYELYINRQKIAYSGVIGVDQLSAKPKYQIQYVSFQPESYEQEI IYVVSNFHHARGGYRKPIEMGTKEVIQNESLIYSAGEVFVFGAMLTMALYQLTVFFFRRQEKSSLFFALFCLFTGLRLVI LDNYYIVYAFPDFSWKWMQVLDYSSAPLLVCFFLSYLRSLFPGKSEVPNWMLQSCWSLSFTYVLFVLLTDPKLFTTTNIV SQVFILFFSICSFYVIFRIYRQRKRDSSLVFYGSLILMLGSTHDLMAGNYWFQAQPLMPFSLFVFFLFQSILLARRNARF YSSMDTLTTELIEVNNRLESSNKVYAKFVPLRLIQLFSKKDESKVKRGDFILKHMSVLSSDIRDFTAISETLSPEETFLF LNDYLRQVGPIIRSQNGFIEKYVGDAIFALFEKEPEDALSAAIQMHKTIANWNKESHNHRVGEIQIGVGIHFGELMLGIV GEEQRIESAVLSDSMGVANSLESMTKKYGAKIILSLDALLELKEPDSYPHRLLDFIKIPAKQKLIGIAQVLVEGVEESFQ LKIQTKEEFEESVNLFWDGDFRAAELGFSSVLNRDPSDKAALLYLERSQQYLQNGPPPGFGKGFLA
Specific function: May function as a membrane-localized receptor protein [H]
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HAMP domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR003660 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00672 HAMP [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 81209; Mature: 81209
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILVNFLFFCLALVSCNFDNTKVAKKGYLEIPEVFVENHKKISLNGEWEFYWNEIYGDAL CCHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHCCCCEEEECCCEEEEHHHHHHHHH FQKIAEKKQTYVNVPSSWNSVRPEGIGGDGYASFRLVVKVPDPNIRYYLRVQPATSAYEL HHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCEEEE YINRQKIAYSGVIGVDQLSAKPKYQIQYVSFQPESYEQEIIYVVSNFHHARGGYRKPIEM EEECCCEEECCCCCHHHHCCCCCEEEEEEEECCCCCCCCEEEEECCCHHHCCCCCCCHHH GTKEVIQNESLIYSAGEVFVFGAMLTMALYQLTVFFFRRQEKSSLFFALFCLFTGLRLVI CHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEE LDNYYIVYAFPDFSWKWMQVLDYSSAPLLVCFFLSYLRSLFPGKSEVPNWMLQSCWSLSF EECEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH TYVLFVLLTDPKLFTTTNIVSQVFILFFSICSFYVIFRIYRQRKRDSSLVFYGSLILMLG HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHC STHDLMAGNYWFQAQPLMPFSLFVFFLFQSILLARRNARFYSSMDTLTTELIEVNNRLES CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC SNKVYAKFVPLRLIQLFSKKDESKVKRGDFILKHMSVLSSDIRDFTAISETLSPEETFLF CCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEH LNDYLRQVGPIIRSQNGFIEKYVGDAIFALFEKEPEDALSAAIQMHKTIANWNKESHNHR HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCE VGEIQIGVGIHFGELMLGIVGEEQRIESAVLSDSMGVANSLESMTKKYGAKIILSLDALL EEEEEEEECEEHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEHHHHH ELKEPDSYPHRLLDFIKIPAKQKLIGIAQVLVEGVEESFQLKIQTKEEFEESVNLFWDGD CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCEEECCC FRAAELGFSSVLNRDPSDKAALLYLERSQQYLQNGPPPGFGKGFLA CCHHHHCHHHHHCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MILVNFLFFCLALVSCNFDNTKVAKKGYLEIPEVFVENHKKISLNGEWEFYWNEIYGDAL CCHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHCCCCEEEECCCEEEEHHHHHHHHH FQKIAEKKQTYVNVPSSWNSVRPEGIGGDGYASFRLVVKVPDPNIRYYLRVQPATSAYEL HHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCEEEE YINRQKIAYSGVIGVDQLSAKPKYQIQYVSFQPESYEQEIIYVVSNFHHARGGYRKPIEM EEECCCEEECCCCCHHHHCCCCCEEEEEEEECCCCCCCCEEEEECCCHHHCCCCCCCHHH GTKEVIQNESLIYSAGEVFVFGAMLTMALYQLTVFFFRRQEKSSLFFALFCLFTGLRLVI CHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEE LDNYYIVYAFPDFSWKWMQVLDYSSAPLLVCFFLSYLRSLFPGKSEVPNWMLQSCWSLSF EECEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH TYVLFVLLTDPKLFTTTNIVSQVFILFFSICSFYVIFRIYRQRKRDSSLVFYGSLILMLG HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHC STHDLMAGNYWFQAQPLMPFSLFVFFLFQSILLARRNARFYSSMDTLTTELIEVNNRLES CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC SNKVYAKFVPLRLIQLFSKKDESKVKRGDFILKHMSVLSSDIRDFTAISETLSPEETFLF CCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEH LNDYLRQVGPIIRSQNGFIEKYVGDAIFALFEKEPEDALSAAIQMHKTIANWNKESHNHR HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCE VGEIQIGVGIHFGELMLGIVGEEQRIESAVLSDSMGVANSLESMTKKYGAKIILSLDALL EEEEEEEECEEHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEHHHHH ELKEPDSYPHRLLDFIKIPAKQKLIGIAQVLVEGVEESFQLKIQTKEEFEESVNLFWDGD CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCEEECCC FRAAELGFSSVLNRDPSDKAALLYLERSQQYLQNGPPPGFGKGFLA CCHHHHCHHHHHCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7601856 [H]