| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222278
Identifier: 183222278
GI number: 183222278
Start: 3025826
End: 3027643
Strand: Reverse
Name: 183222278
Synonym: LEPBI_I2929
Alternate gene names: NA
Gene position: 3027643-3025826 (Counterclockwise)
Preceding gene: 183222279
Following gene: 183222277
Centisome position: 84.11
GC content: 36.85
Gene sequence:
>1818_bases ATGCTCTCTCTCATCATCGATCGTGTTGGCAATGTAAATATCTTCAATGTTTTGGAAGACAATCTTCCCGTTGAAGAATC TCATATCCAATCTACGTTAGACGATGATCTTATATTAGAATATTTGGGTGAAGTGGAAAGACTTGTCCACGTTTCCCAGT CGGTTTTATCAAAACCAAACCAAATTTTAAATGTCGATATTCTACAAGACCTAAAGGTACTCGGGGAAACTTTTTTCCAG CAGTTTTTTCCAACATCGATCATTGAAAAATTAAAAAACACAAACAAACAAAGTATCCATTTTAATATTGATCCAACTCT GGCTCTTGTCCCTTGGGAACTTTTACACGACGGTAATAGTTTCCTTTCTGATAAATTTCGGATTGGGAAAACCATCCGAG GTGGATTACATAGGTCCACTCACCAAGAAAATAGAAAGATCAAAATGCTCATCATTGCTGATCCCACGGAAGACCTTCCT CATGCCCAAAAGGAAGGCGAAGTTTTGTTTTCTGTTCTCAGCCAAAAAGTACCAAACCATCTATTGGAATTAGAATTCAT TGGTGGCAAACAAGTCACCAAACTCAAGTTACTTTCTCTTATCAAAGACAAACACATCATCCATTATTCGGGTCATCTCC ATTTTTCAGATGATTCTCTGGAGAATGGTTGGTTGTTATCAGACGGGAAAGTCTTAAAAGCAAGAGAGATCAAATCCACA GGAATTGATACCGATTTAGTTTTCTCTAACTCTTGTATGTCGGCAAAATCGGCAGGTAAAAAACTAAATACAAACATCCT CAATCAATATGCGGGTGCTTTTTTAACAGCTGGGATCAAAACATTTGTTGGAACCAATTGGGAAATTTTGGATAACGAGA GGACTATTGATTTTACGGTTCGATTTTATACCTATTTGTTTTCGGATAAATCGGTGGGTGAGTCCCTTTATCTTTCGAAA GAATTTGCACGTAGGAATTACCATGCCAATGATTTGACTTGGGCCAATTATTCTTTGTACGGGAATCCTGATTTTTCTAT GTTTGCAAAAGAGCGAAGGAATTTCCATTCGGCAAAGATCCTGAACCCAACCGCAGTCATAGAGTTTTATCCGACACCAA TTGCATCAGCCTATTCCAAATGTACTAATTTGAACAAAACCAAAACGGTAGATAAATCAAACCTCCTTAATTTAATCCGA CTCTTTGAAGCAATTAGCCAAGTGGTTGGAATGATCGTTTTTAGTGACCATGCATCACATGCAATGAACAAATCCATACC GAATAATTTGGATGATGCTGTTACACTTCGAAAATGGTGGGAACTTGTTTATAGTTGTGTTTGGGATTTTCAAAAATTAA AAATCACAAGTATCTTTGAGACGGCTCTCCCTGTTTTACATGAACAAAAGGAAACCGTTTTTAAAATTTTAGGTTGGATG GAAGGTTGGGAACAAGGTGATATCAATTCGGAAGAATTAGAATCCTACCAAATCATACTTCAATTTTTTTTGGAAAACAT GTTACTCGAATTTGCTGAACTAGAACGAATCAGTATCTTACTTGTTTCGGAAAACAACAATCCACATTTTTATTTCAAAG GAATCAAACCTTCATACCTGTATCCTGCGTCACATGGTTCGCGCGAAAAACTATTAGAACAATTGGCGCATCAAAAGGGA AACTTGGTTTTGGTTCACGAAAGTCGTAAAATGGTGATTCCTTTCCAAACTTATTTCAAAGAAAAAAAAGAAACAGGTGA TTTGGAACTTGTATTCAATGGCCTCATTCCATTTGTATTAGGGGCCAAACAGAATTGA
Upstream 100 bases:
>100_bases TTCGGGGTTAACCCCAGGTAGTTATACCATCGAGTTTGTCGGTCCTAATGTTTCAAAATCGTTTGACTTGTCCATTCTCC TTGGATAGCTTCATGAGAGG
Downstream 100 bases:
>100_bases GTTTATGCCATCCAGAAAAAGGGAATGTTTCCTGTGGTGCTTGTTGTGGACTCTTCAATTTAAAACTCCAACCAAACGAA TATAAAAACCTCCTTTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 605; Mature: 605
Protein sequence:
>605_residues MLSLIIDRVGNVNIFNVLEDNLPVEESHIQSTLDDDLILEYLGEVERLVHVSQSVLSKPNQILNVDILQDLKVLGETFFQ QFFPTSIIEKLKNTNKQSIHFNIDPTLALVPWELLHDGNSFLSDKFRIGKTIRGGLHRSTHQENRKIKMLIIADPTEDLP HAQKEGEVLFSVLSQKVPNHLLELEFIGGKQVTKLKLLSLIKDKHIIHYSGHLHFSDDSLENGWLLSDGKVLKAREIKST GIDTDLVFSNSCMSAKSAGKKLNTNILNQYAGAFLTAGIKTFVGTNWEILDNERTIDFTVRFYTYLFSDKSVGESLYLSK EFARRNYHANDLTWANYSLYGNPDFSMFAKERRNFHSAKILNPTAVIEFYPTPIASAYSKCTNLNKTKTVDKSNLLNLIR LFEAISQVVGMIVFSDHASHAMNKSIPNNLDDAVTLRKWWELVYSCVWDFQKLKITSIFETALPVLHEQKETVFKILGWM EGWEQGDINSEELESYQIILQFFLENMLLEFAELERISILLVSENNNPHFYFKGIKPSYLYPASHGSREKLLEQLAHQKG NLVLVHESRKMVIPFQTYFKEKKETGDLELVFNGLIPFVLGAKQN
Sequences:
>Translated_605_residues MLSLIIDRVGNVNIFNVLEDNLPVEESHIQSTLDDDLILEYLGEVERLVHVSQSVLSKPNQILNVDILQDLKVLGETFFQ QFFPTSIIEKLKNTNKQSIHFNIDPTLALVPWELLHDGNSFLSDKFRIGKTIRGGLHRSTHQENRKIKMLIIADPTEDLP HAQKEGEVLFSVLSQKVPNHLLELEFIGGKQVTKLKLLSLIKDKHIIHYSGHLHFSDDSLENGWLLSDGKVLKAREIKST GIDTDLVFSNSCMSAKSAGKKLNTNILNQYAGAFLTAGIKTFVGTNWEILDNERTIDFTVRFYTYLFSDKSVGESLYLSK EFARRNYHANDLTWANYSLYGNPDFSMFAKERRNFHSAKILNPTAVIEFYPTPIASAYSKCTNLNKTKTVDKSNLLNLIR LFEAISQVVGMIVFSDHASHAMNKSIPNNLDDAVTLRKWWELVYSCVWDFQKLKITSIFETALPVLHEQKETVFKILGWM EGWEQGDINSEELESYQIILQFFLENMLLEFAELERISILLVSENNNPHFYFKGIKPSYLYPASHGSREKLLEQLAHQKG NLVLVHESRKMVIPFQTYFKEKKETGDLELVFNGLIPFVLGAKQN >Mature_605_residues MLSLIIDRVGNVNIFNVLEDNLPVEESHIQSTLDDDLILEYLGEVERLVHVSQSVLSKPNQILNVDILQDLKVLGETFFQ QFFPTSIIEKLKNTNKQSIHFNIDPTLALVPWELLHDGNSFLSDKFRIGKTIRGGLHRSTHQENRKIKMLIIADPTEDLP HAQKEGEVLFSVLSQKVPNHLLELEFIGGKQVTKLKLLSLIKDKHIIHYSGHLHFSDDSLENGWLLSDGKVLKAREIKST GIDTDLVFSNSCMSAKSAGKKLNTNILNQYAGAFLTAGIKTFVGTNWEILDNERTIDFTVRFYTYLFSDKSVGESLYLSK EFARRNYHANDLTWANYSLYGNPDFSMFAKERRNFHSAKILNPTAVIEFYPTPIASAYSKCTNLNKTKTVDKSNLLNLIR LFEAISQVVGMIVFSDHASHAMNKSIPNNLDDAVTLRKWWELVYSCVWDFQKLKITSIFETALPVLHEQKETVFKILGWM EGWEQGDINSEELESYQIILQFFLENMLLEFAELERISILLVSENNNPHFYFKGIKPSYLYPASHGSREKLLEQLAHQKG NLVLVHESRKMVIPFQTYFKEKKETGDLELVFNGLIPFVLGAKQN
Specific function: Unknown
COG id: COG4995
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69266; Mature: 69266
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSLIIDRVGNVNIFNVLEDNLPVEESHIQSTLDDDLILEYLGEVERLVHVSQSVLSKPN CCEEEEHHCCCCEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC QILNVDILQDLKVLGETFFQQFFPTSIIEKLKNTNKQSIHFNIDPTLALVPWELLHDGNS CEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCEEECCHHHHHCCCH FLSDKFRIGKTIRGGLHRSTHQENRKIKMLIIADPTEDLPHAQKEGEVLFSVLSQKVPNH HHHHHHHHCHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHH LLELEFIGGKQVTKLKLLSLIKDKHIIHYSGHLHFSDDSLENGWLLSDGKVLKAREIKST HEEEEEECCCCHHHHHHHHHHCCCEEEEEECEEEECCCCCCCCEEECCCCEEEEHHHHHC GIDTDLVFSNSCMSAKSAGKKLNTNILNQYAGAFLTAGIKTFVGTNWEILDNERTIDFTV CCCCEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEE RFYTYLFSDKSVGESLYLSKEFARRNYHANDLTWANYSLYGNPDFSMFAKERRNFHSAKI EEEHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCEE LNPTAVIEFYPTPIASAYSKCTNLNKTKTVDKSNLLNLIRLFEAISQVVGMIVFSDHASH CCCEEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEHCCCCHHH AMNKSIPNNLDDAVTLRKWWELVYSCVWDFQKLKITSIFETALPVLHEQKETVFKILGWM HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGWEQGDINSEELESYQIILQFFLENMLLEFAELERISILLVSENNNPHFYFKGIKPSYL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEECCCCCEE YPASHGSREKLLEQLAHQKGNLVLVHESRKMVIPFQTYFKEKKETGDLELVFNGLIPFVL CCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEHHHHHHHHCCCCCCEEEHHHHHHHHH GAKQN CCCCC >Mature Secondary Structure MLSLIIDRVGNVNIFNVLEDNLPVEESHIQSTLDDDLILEYLGEVERLVHVSQSVLSKPN CCEEEEHHCCCCEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC QILNVDILQDLKVLGETFFQQFFPTSIIEKLKNTNKQSIHFNIDPTLALVPWELLHDGNS CEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCEEECCHHHHHCCCH FLSDKFRIGKTIRGGLHRSTHQENRKIKMLIIADPTEDLPHAQKEGEVLFSVLSQKVPNH HHHHHHHHCHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHH LLELEFIGGKQVTKLKLLSLIKDKHIIHYSGHLHFSDDSLENGWLLSDGKVLKAREIKST HEEEEEECCCCHHHHHHHHHHCCCEEEEEECEEEECCCCCCCCEEECCCCEEEEHHHHHC GIDTDLVFSNSCMSAKSAGKKLNTNILNQYAGAFLTAGIKTFVGTNWEILDNERTIDFTV CCCCEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEE RFYTYLFSDKSVGESLYLSKEFARRNYHANDLTWANYSLYGNPDFSMFAKERRNFHSAKI EEEHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCEE LNPTAVIEFYPTPIASAYSKCTNLNKTKTVDKSNLLNLIRLFEAISQVVGMIVFSDHASH CCCEEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEHCCCCHHH AMNKSIPNNLDDAVTLRKWWELVYSCVWDFQKLKITSIFETALPVLHEQKETVFKILGWM HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGWEQGDINSEELESYQIILQFFLENMLLEFAELERISILLVSENNNPHFYFKGIKPSYL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEECCCCCEE YPASHGSREKLLEQLAHQKGNLVLVHESRKMVIPFQTYFKEKKETGDLELVFNGLIPFVL CCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEHHHHHHHHCCCCCCEEEHHHHHHHHH GAKQN CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA