| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222259
Identifier: 183222259
GI number: 183222259
Start: 3010096
End: 3010485
Strand: Reverse
Name: 183222259
Synonym: LEPBI_I2910
Alternate gene names: NA
Gene position: 3010485-3010096 (Counterclockwise)
Preceding gene: 183222261
Following gene: 183222258
Centisome position: 83.63
GC content: 39.74
Gene sequence:
>390_bases ATGCAATTCCAAGTCATCCTCTTCTTCTGTATAGCTGTATTCTTCAATGCATTGGCGAATATTTTAATCAAAACATCTTC TATGCAGGACAAACAAGTCACACCTGGAGATGGTTTTTGGAACCTTGTGTTTACGGTATTCAATCCGTATTTCATTGCGG GGCTTGCCAGTTTTGGTTTGGCATTACTCGGATATCGATATGTGTTAGGTAAAGGATTAAAACTTTCATTAGCATACCCT GTGTTTACTTCCAGCGGATTTATCATCGTACTCATTGCGTCGTCCGTGTTTTTTAAAGAACGTTTGAATTTTACACAATG GCTTGGGATCTCGTTTATCCTGGTAGGTGTATGGCTTACCGCCTTGCAGATGTTTGACGTTAACTCTTGA
Upstream 100 bases:
>100_bases AATCTAAGTAAGCAGTATCCCAATTTTTGTACCGAAAGGATTTTGATTTCATTTTTCTATTTGACCCTTCTTCATTTGCA TCGGATTTTGTCTCTATCCC
Downstream 100 bases:
>100_bases AAGAATTCCCTTCTTTTTCAATTAAAAACTTTTTATTTCGAAGTTCACTTTCTTTTCATACGATATTTATTATCATCGTT TTTGTTTTCCTTCCTTTTTG
Product: putative transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MQFQVILFFCIAVFFNALANILIKTSSMQDKQVTPGDGFWNLVFTVFNPYFIAGLASFGLALLGYRYVLGKGLKLSLAYP VFTSSGFIIVLIASSVFFKERLNFTQWLGISFILVGVWLTALQMFDVNS
Sequences:
>Translated_129_residues MQFQVILFFCIAVFFNALANILIKTSSMQDKQVTPGDGFWNLVFTVFNPYFIAGLASFGLALLGYRYVLGKGLKLSLAYP VFTSSGFIIVLIASSVFFKERLNFTQWLGISFILVGVWLTALQMFDVNS >Mature_129_residues MQFQVILFFCIAVFFNALANILIKTSSMQDKQVTPGDGFWNLVFTVFNPYFIAGLASFGLALLGYRYVLGKGLKLSLAYP VFTSSGFIIVLIASSVFFKERLNFTQWLGISFILVGVWLTALQMFDVNS
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14446; Mature: 14446
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFQVILFFCIAVFFNALANILIKTSSMQDKQVTPGDGFWNLVFTVFNPYFIAGLASFGL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ALLGYRYVLGKGLKLSLAYPVFTSSGFIIVLIASSVFFKERLNFTQWLGISFILVGVWLT HHHHHHHHHCCCCEEEEECCEECCCCEEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHH ALQMFDVNS HHHHHCCCC >Mature Secondary Structure MQFQVILFFCIAVFFNALANILIKTSSMQDKQVTPGDGFWNLVFTVFNPYFIAGLASFGL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ALLGYRYVLGKGLKLSLAYPVFTSSGFIIVLIASSVFFKERLNFTQWLGISFILVGVWLT HHHHHHHHHCCCCEEEEECCEECCCCEEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHH ALQMFDVNS HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA