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The map label for this gene is yadH [H]

Identifier: 183222087

GI number: 183222087

Start: 2821624

End: 2822385

Strand: Reverse

Name: yadH [H]

Synonym: LEPBI_I2729

Alternate gene names: 183222087

Gene position: 2822385-2821624 (Counterclockwise)

Preceding gene: 183222088

Following gene: 183222082

Centisome position: 78.41

GC content: 40.81

Gene sequence:

>762_bases
ATGAATTTTTTTGCAATCCAAGCAATCTACCGGTTTGAAATGGCACGAACCTTTCGTACCTTACTACAAAGTATTGCCTC
TCCTGTACTTTCCACGTCGTTGTATTTCATTGTCTTTGGTTCCGCGATTGGATCTCGGATCCAAGAGATTGATGGGATCC
ACTATGGAAGTTTCATTGTGCCAGGCCTTGTGATGTTGTCACTCTTAACTGAAAGTATCTCCAATGCATCCTTTGGGATT
TATTTTCCTAAGTTCAATGGAACCATTTACGAGATCCTTTCGGCTCCTGTGACCATGTGGGAAGTGGTGATTGGGTATGT
GGGGGCAGCGGCCACCAAATCACTGATGCTTGGGATTTTGATGCTTTTTACCGCTTCCTTTTTTGTTCCCATTCGGATCG
ATCATCCGTTTTTAATGGTATTTTTCCTTGTGTTAACATGCATTAGCTTTAGTTTGTTTGGATTTGTGATTGGGATTTGG
GCGGATAGTTTTGAAAAACTACAAATGATTCCCATGCTTGTGATCACACCCCTTGTTTTTCTCGGTGGGAGTTTTTATTC
CATCCAAATGTTACCAAGTTTTTGGCAACGAGTGAGCATGTTCAATCCAGTGTTGTATCTCGTGAGCGGATTTCGGTACA
GCTTTTTTGAACGAGCAGATGTTGCTTTGTCTGTGAGTATCACAATGATTTTAGTGTTTTTATCAGTGTGTTTGTTTGTG
ACATGGCTTATCTTTCGCACTGGGTATAAAATCAAAAACTAA

Upstream 100 bases:

>100_bases
TACTCGATGATCTCAAAAAAGAAAAAATCCAATTCAGTGATTTGAGTACCAAACAAAGTTCTTTGGAAGAAATTTTTGTT
CAATTATTACAGGAGTCCGT

Downstream 100 bases:

>100_bases
ATCGAAATTTAGTTCCTTTCGTGGGATAGGTCATTCCGATTGGGATTTTGAATTCAGTTTTGTTTTTTCGTTATCAACCG
AAGGTCGGCGACTAACCTTT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MNFFAIQAIYRFEMARTFRTLLQSIASPVLSTSLYFIVFGSAIGSRIQEIDGIHYGSFIVPGLVMLSLLTESISNASFGI
YFPKFNGTIYEILSAPVTMWEVVIGYVGAAATKSLMLGILMLFTASFFVPIRIDHPFLMVFFLVLTCISFSLFGFVIGIW
ADSFEKLQMIPMLVITPLVFLGGSFYSIQMLPSFWQRVSMFNPVLYLVSGFRYSFFERADVALSVSITMILVFLSVCLFV
TWLIFRTGYKIKN

Sequences:

>Translated_253_residues
MNFFAIQAIYRFEMARTFRTLLQSIASPVLSTSLYFIVFGSAIGSRIQEIDGIHYGSFIVPGLVMLSLLTESISNASFGI
YFPKFNGTIYEILSAPVTMWEVVIGYVGAAATKSLMLGILMLFTASFFVPIRIDHPFLMVFFLVLTCISFSLFGFVIGIW
ADSFEKLQMIPMLVITPLVFLGGSFYSIQMLPSFWQRVSMFNPVLYLVSGFRYSFFERADVALSVSITMILVFLSVCLFV
TWLIFRTGYKIKN
>Mature_253_residues
MNFFAIQAIYRFEMARTFRTLLQSIASPVLSTSLYFIVFGSAIGSRIQEIDGIHYGSFIVPGLVMLSLLTESISNASFGI
YFPKFNGTIYEILSAPVTMWEVVIGYVGAAATKSLMLGILMLFTASFFVPIRIDHPFLMVFFLVLTCISFSLFGFVIGIW
ADSFEKLQMIPMLVITPLVFLGGSFYSIQMLPSFWQRVSMFNPVLYLVSGFRYSFFERADVALSVSITMILVFLSVCLFV
TWLIFRTGYKIKN

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=249, Percent_Identity=38.1526104417671, Blast_Score=192, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28591; Mature: 28591

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS51012 ABC_TM2 ; PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]