| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183221912
Identifier: 183221912
GI number: 183221912
Start: 2640574
End: 2641425
Strand: Reverse
Name: 183221912
Synonym: LEPBI_I2551
Alternate gene names: NA
Gene position: 2641425-2640574 (Counterclockwise)
Preceding gene: 183221913
Following gene: 183221911
Centisome position: 73.38
GC content: 41.43
Gene sequence:
>852_bases ATGATCCAAGCTGATAGGAAAATCAAAAAAGGAAGTAGGGAAGTTATGTACTTTTCGATTGTCTTTCTTTTTTCTTTTTT CCCGCTACTGAACCCTCTATTTTCACAAACGACAGATACAAAGGAACTGGACCAAATCCTACGCCAAGAGTTGGGTGAGA CTAAATCCAAACCGGTTGGATCTGATAGTGGATCCAATGGAAATTCAGGATCCAATCCTAATTTCGATTCAAACTCAAAT GGAAAATCCGCAAATGGAAATACTTCCAATCCCCAAGCAAACGGTAGTCAGTCGGCATCTTCTGAAGGAAACAAAGAAGA ACCGAACCTAATCCAAGAGCGTTATGCCGAAAACCAAGATGATTCTCCGTCGGCCACTTGGATATTACTGAAAATACTAT TTGTATTAGCGATTTTAGTGGGTGCAGGTTATTATTTAATTTTGCAAATGCAAAAATCCAAATCGGCAAAGTATCCAGTG AAAGGGTTTATGAAGGTATTGTCGAGTTTACCTTTGTCTGCCACACAATCGGTGCAAATCATTGAAGTGGGTGGTCGTAC ACTCGTGTTAGGTGTTGCCGATGGATCAGTCAGTTTACTCACAGAAGTCACTGCTCCCGATGAAAAAAACCAAATCCAAA AAATGAAAGAGGAAGCTGATCCTTACGTTCCTAATTTTTTGGAAACAGTCCTCGAGAGCCTACAGTCGAAGGCACAACGA AAAATCCGAATCAACCCCAACCAAATGGAAACTTTAGAAATGGACGGGGCAGCGGAAATCCAACGGAAAGCCAAAGAAGG ATTGGAACGGCTACGCAAACACCGAAAACTTTTGGAAGGAGGAGAAACATGA
Upstream 100 bases:
>100_bases GCAAACTCATTGCAAAGGGTGAGGTTGTGGTCATCGATGAAAACTTTGGTGTTCGTGTCACCGATATCGTAAGTCCCACA GACAGACTCAAAGGCGAAAA
Downstream 100 bases:
>100_bases GAGATCGTTTTTTTTCCTTTGTAAAGAGACATAAATCAGTTATTTTTCTCATTAGTATTTTGTTTTTGGTATCGGCAAGT GGATTTGCAGGCTTACTCGC
Product: putative flagellar biogenesis protein FliO
Products: NA
Alternate protein names: Flagellar Biogenesis Protein FliO
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MIQADRKIKKGSREVMYFSIVFLFSFFPLLNPLFSQTTDTKELDQILRQELGETKSKPVGSDSGSNGNSGSNPNFDSNSN GKSANGNTSNPQANGSQSASSEGNKEEPNLIQERYAENQDDSPSATWILLKILFVLAILVGAGYYLILQMQKSKSAKYPV KGFMKVLSSLPLSATQSVQIIEVGGRTLVLGVADGSVSLLTEVTAPDEKNQIQKMKEEADPYVPNFLETVLESLQSKAQR KIRINPNQMETLEMDGAAEIQRKAKEGLERLRKHRKLLEGGET
Sequences:
>Translated_283_residues MIQADRKIKKGSREVMYFSIVFLFSFFPLLNPLFSQTTDTKELDQILRQELGETKSKPVGSDSGSNGNSGSNPNFDSNSN GKSANGNTSNPQANGSQSASSEGNKEEPNLIQERYAENQDDSPSATWILLKILFVLAILVGAGYYLILQMQKSKSAKYPV KGFMKVLSSLPLSATQSVQIIEVGGRTLVLGVADGSVSLLTEVTAPDEKNQIQKMKEEADPYVPNFLETVLESLQSKAQR KIRINPNQMETLEMDGAAEIQRKAKEGLERLRKHRKLLEGGET >Mature_283_residues MIQADRKIKKGSREVMYFSIVFLFSFFPLLNPLFSQTTDTKELDQILRQELGETKSKPVGSDSGSNGNSGSNPNFDSNSN GKSANGNTSNPQANGSQSASSEGNKEEPNLIQERYAENQDDSPSATWILLKILFVLAILVGAGYYLILQMQKSKSAKYPV KGFMKVLSSLPLSATQSVQIIEVGGRTLVLGVADGSVSLLTEVTAPDEKNQIQKMKEEADPYVPNFLETVLESLQSKAQR KIRINPNQMETLEMDGAAEIQRKAKEGLERLRKHRKLLEGGET
Specific function: Unknown
COG id: COG3190
COG function: function code N; Flagellar biogenesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31148; Mature: 31148
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQADRKIKKGSREVMYFSIVFLFSFFPLLNPLFSQTTDTKELDQILRQELGETKSKPVG CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC SDSGSNGNSGSNPNFDSNSNGKSANGNTSNPQANGSQSASSEGNKEEPNLIQERYAENQD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC DSPSATWILLKILFVLAILVGAGYYLILQMQKSKSAKYPVKGFMKVLSSLPLSATQSVQI CCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCCHHHHHHHHHHCCCCCCCCEEE IEVGGRTLVLGVADGSVSLLTEVTAPDEKNQIQKMKEEADPYVPNFLETVLESLQSKAQR EEECCCEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH KIRINPNQMETLEMDGAAEIQRKAKEGLERLRKHRKLLEGGET CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIQADRKIKKGSREVMYFSIVFLFSFFPLLNPLFSQTTDTKELDQILRQELGETKSKPVG CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC SDSGSNGNSGSNPNFDSNSNGKSANGNTSNPQANGSQSASSEGNKEEPNLIQERYAENQD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC DSPSATWILLKILFVLAILVGAGYYLILQMQKSKSAKYPVKGFMKVLSSLPLSATQSVQI CCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCCHHHHHHHHHHCCCCCCCCEEE IEVGGRTLVLGVADGSVSLLTEVTAPDEKNQIQKMKEEADPYVPNFLETVLESLQSKAQR EEECCCEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH KIRINPNQMETLEMDGAAEIQRKAKEGLERLRKHRKLLEGGET CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA