| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183221872
Identifier: 183221872
GI number: 183221872
Start: 2590513
End: 2591100
Strand: Reverse
Name: 183221872
Synonym: LEPBI_I2506
Alternate gene names: NA
Gene position: 2591100-2590513 (Counterclockwise)
Preceding gene: 183221874
Following gene: 183221871
Centisome position: 71.98
GC content: 41.84
Gene sequence:
>588_bases ATGTGTAACAAGAAAATAAAATCAAACTACCCTCTACATCTACTAAATGGTATATGTTTTCTCATTGGAATTCAATTCCT ATTTGTGAATTGTGAAAAAAAGAAAAGTTGTTTTGCTTACCTTCCGAATGTAACAACAGATAACCAAACCAATCAAAAAT CAAAATCAACAACTGTTTTTCCCGTCGGGAACCAATCTGAGTCCGATTGTGAAGATACAAGAATGTTAACAGCACTCGTA ACGGGTCTCTCCACTGCGCCTGCCCAAGTGGTTTTTTTTAATGATAGTAGCGCCGTTGCGACGCGGGCTGGATTGTATTA TGATGCAGCGTGTACGCAACCTGCCGCCGAAGCCACAAACATTGCCAATGGAACTTTCTCTCGTTATCTGGATTTTGTTG CCTCTCCTGCCACAAATACTTCTCCCTTTTATTATTATGGGTATCTGCGGGAAGGTGGAGCTTCCGTTTGTTATACCCAA CCACGTTCGTTTACGGTCCGAAGTTTACCTTGTACAATCAATTTAAGGTATTCTGGAGGTTCTGGGGCAACGATGTCCGT TACCTCCAGTTGTGGTGAGACGAATTAG
Upstream 100 bases:
>100_bases TAAGAAACGATTCTTTATCCCAAGTAGGTTTTGATCCAAGTCCGCCAAACGGTTGTGACTCGGTAATGAGACCATGCTTC AATAAGAAAGGAAAAAGAAT
Downstream 100 bases:
>100_bases GAAAGTTGAATCCATCCTTACCAAAATGAGAAGGAAGCTTCGATATTTAAATCTATTCTAATTTTTGAATGGATGTAAAT GACGGTAGGAAACTCGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MCNKKIKSNYPLHLLNGICFLIGIQFLFVNCEKKKSCFAYLPNVTTDNQTNQKSKSTTVFPVGNQSESDCEDTRMLTALV TGLSTAPAQVVFFNDSSAVATRAGLYYDAACTQPAAEATNIANGTFSRYLDFVASPATNTSPFYYYGYLREGGASVCYTQ PRSFTVRSLPCTINLRYSGGSGATMSVTSSCGETN
Sequences:
>Translated_195_residues MCNKKIKSNYPLHLLNGICFLIGIQFLFVNCEKKKSCFAYLPNVTTDNQTNQKSKSTTVFPVGNQSESDCEDTRMLTALV TGLSTAPAQVVFFNDSSAVATRAGLYYDAACTQPAAEATNIANGTFSRYLDFVASPATNTSPFYYYGYLREGGASVCYTQ PRSFTVRSLPCTINLRYSGGSGATMSVTSSCGETN >Mature_195_residues MCNKKIKSNYPLHLLNGICFLIGIQFLFVNCEKKKSCFAYLPNVTTDNQTNQKSKSTTVFPVGNQSESDCEDTRMLTALV TGLSTAPAQVVFFNDSSAVATRAGLYYDAACTQPAAEATNIANGTFSRYLDFVASPATNTSPFYYYGYLREGGASVCYTQ PRSFTVRSLPCTINLRYSGGSGATMSVTSSCGETN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21111; Mature: 21111
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCNKKIKSNYPLHLLNGICFLIGIQFLFVNCEKKKSCFAYLPNVTTDNQTNQKSKSTTVF CCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCEEEECCCCCCCCCCCCCCCCCEEE PVGNQSESDCEDTRMLTALVTGLSTAPAQVVFFNDSSAVATRAGLYYDAACTQPAAEATN ECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHCCEEEECCCCCCCHHHHH IANGTFSRYLDFVASPATNTSPFYYYGYLREGGASVCYTQPRSFTVRSLPCTINLRYSGG CCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEECCCCEEEEECCEEEEEEECCC SGATMSVTSSCGETN CCCEEEEECCCCCCC >Mature Secondary Structure MCNKKIKSNYPLHLLNGICFLIGIQFLFVNCEKKKSCFAYLPNVTTDNQTNQKSKSTTVF CCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCEEEECCCCCCCCCCCCCCCCCEEE PVGNQSESDCEDTRMLTALVTGLSTAPAQVVFFNDSSAVATRAGLYYDAACTQPAAEATN ECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHCCEEEECCCCCCCHHHHH IANGTFSRYLDFVASPATNTSPFYYYGYLREGGASVCYTQPRSFTVRSLPCTINLRYSGG CCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEECCCCEEEEECCEEEEEEECCC SGATMSVTSSCGETN CCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA