Click here to switch to the map view.

The map label for this gene is ylbK [H]

Identifier: 183221822

GI number: 183221822

Start: 2532940

End: 2533803

Strand: Reverse

Name: ylbK [H]

Synonym: LEPBI_I2453

Alternate gene names: 183221822

Gene position: 2533803-2532940 (Counterclockwise)

Preceding gene: 183221823

Following gene: 183221821

Centisome position: 70.39

GC content: 35.3

Gene sequence:

>864_bases
ATGATAGAACTTATTTTTCCAAAAAAGTATTCGGCTTTATGTTTAAAATCAGCCTTCTTCGGTTTTTTTGCCCACACCGG
CTTTGTGAGAGGATTACAAGAGATAGGATTTAAACCATCAATCGTTACAGGTTCGAGTTCCGGTGCTATGATTGGAGCAT
TGTATGCTACAGGAAAGGATATGGTAGAATTTGAGTCTGTAGTTTTGGGACTGAAAAAAAAAGATTTTTGGGAGGGTAAT
TCCCTAACATTACTCGGTAGACTTTTGAAGAAAGGTTGGAACCAATCGAGTGGTGTCCTAACGGGGCAAGCGACCCGGAA
GATTTTATATCCTTATCTAGGGAATAAAAAGTTTTCTGAATTACCAATGAAACTTGGGATTGCTGTTTCAAATTTATCAA
AAAACAAACGGGAATTGATCACAGAAGGTAATGTTTTAGATGCAGTTATGGCTTCAATTGCATTTCCATTTTTATATGAA
GTCCAAGAATTCCAAGGACAGGAGTTTTTGGATGGTGGGATTGGCGATGGGGAACCAATCAAGGAATTAATTTTAGATCC
AAGCATCGATCGTATCGTGATCCATCAAATCAATAATAATAGACCAGTCAGTAAAAATATGATGAAACGTGCATTAGATG
CATCTGTACAAATTATAGAGACCGAAACTGAAGATTTAAAAACTTTGTTAGCAAAAGAAAAAGGTAAAAAGTTAATCAGA
TTAGAAACCAACACTCCATATTTATCGCCTAATGATTTTTCAAAAGGCAAGTTTGCTTTGGCAGAAGGAAGAGGAACTGC
CTATAAACATAAATCTGAAATTTTAGGTGATATGGAATTACCTATCTTTGGTTTTTTTAATTAA

Upstream 100 bases:

>100_bases
TACTTGTTGCTTTTATCGGAGTATTGTTCTATGATATGACAAAAGTTTCTGTTTCAAGATGGATTCGAAAAGATTGAATA
GGTGTATGAATTACTAGGTT

Downstream 100 bases:

>100_bases
TGAATTCTAATATGGATTCTCAAAGAAAAATAAATGTTTTGGTTGTAGAAGATTCCGTATCCTCTTATAAGGCAATCGTA
TCAGTATTAGAAAACTTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MIELIFPKKYSALCLKSAFFGFFAHTGFVRGLQEIGFKPSIVTGSSSGAMIGALYATGKDMVEFESVVLGLKKKDFWEGN
SLTLLGRLLKKGWNQSSGVLTGQATRKILYPYLGNKKFSELPMKLGIAVSNLSKNKRELITEGNVLDAVMASIAFPFLYE
VQEFQGQEFLDGGIGDGEPIKELILDPSIDRIVIHQINNNRPVSKNMMKRALDASVQIIETETEDLKTLLAKEKGKKLIR
LETNTPYLSPNDFSKGKFALAEGRGTAYKHKSEILGDMELPIFGFFN

Sequences:

>Translated_287_residues
MIELIFPKKYSALCLKSAFFGFFAHTGFVRGLQEIGFKPSIVTGSSSGAMIGALYATGKDMVEFESVVLGLKKKDFWEGN
SLTLLGRLLKKGWNQSSGVLTGQATRKILYPYLGNKKFSELPMKLGIAVSNLSKNKRELITEGNVLDAVMASIAFPFLYE
VQEFQGQEFLDGGIGDGEPIKELILDPSIDRIVIHQINNNRPVSKNMMKRALDASVQIIETETEDLKTLLAKEKGKKLIR
LETNTPYLSPNDFSKGKFALAEGRGTAYKHKSEILGDMELPIFGFFN
>Mature_287_residues
MIELIFPKKYSALCLKSAFFGFFAHTGFVRGLQEIGFKPSIVTGSSSGAMIGALYATGKDMVEFESVVLGLKKKDFWEGN
SLTLLGRLLKKGWNQSSGVLTGQATRKILYPYLGNKKFSELPMKLGIAVSNLSKNKRELITEGNVLDAVMASIAFPFLYE
VQEFQGQEFLDGGIGDGEPIKELILDPSIDRIVIHQINNNRPVSKNMMKRALDASVQIIETETEDLKTLLAKEKGKKLIR
LETNTPYLSPNDFSKGKFALAEGRGTAYKHKSEILGDMELPIFGFFN

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 31816; Mature: 31816

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELIFPKKYSALCLKSAFFGFFAHTGFVRGLQEIGFKPSIVTGSSSGAMIGALYATGKD
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCH
MVEFESVVLGLKKKDFWEGNSLTLLGRLLKKGWNQSSGVLTGQATRKILYPYLGNKKFSE
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHCCCCCHHH
LPMKLGIAVSNLSKNKRELITEGNVLDAVMASIAFPFLYEVQEFQGQEFLDGGIGDGEPI
CCHHHCEEHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHH
KELILDPSIDRIVIHQINNNRPVSKNMMKRALDASVQIIETETEDLKTLLAKEKGKKLIR
HHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHCCCEEEE
LETNTPYLSPNDFSKGKFALAEGRGTAYKHKSEILGDMELPIFGFFN
EECCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCEEECCC
>Mature Secondary Structure
MIELIFPKKYSALCLKSAFFGFFAHTGFVRGLQEIGFKPSIVTGSSSGAMIGALYATGKD
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCH
MVEFESVVLGLKKKDFWEGNSLTLLGRLLKKGWNQSSGVLTGQATRKILYPYLGNKKFSE
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHCCCCCHHH
LPMKLGIAVSNLSKNKRELITEGNVLDAVMASIAFPFLYEVQEFQGQEFLDGGIGDGEPI
CCHHHCEEHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHH
KELILDPSIDRIVIHQINNNRPVSKNMMKRALDASVQIIETETEDLKTLLAKEKGKKLIR
HHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHCCCEEEE
LETNTPYLSPNDFSKGKFALAEGRGTAYKHKSEILGDMELPIFGFFN
EECCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]