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The map label for this gene is hycC [C]

Identifier: 183221792

GI number: 183221792

Start: 2495362

End: 2497098

Strand: Reverse

Name: hycC [C]

Synonym: LEPBI_I2423

Alternate gene names: 183221792

Gene position: 2497098-2495362 (Counterclockwise)

Preceding gene: 183221796

Following gene: 183221791

Centisome position: 69.37

GC content: 32.82

Gene sequence:

>1737_bases
ATGTTAGAAGATAAGAATCAATCGATCATACGATCGATAGTCGTAGGAATTGCAGCTCTTGCACCATTAATCATATTTTT
GTTCACGAATGAAGATATACTATCGGTCGACTTTCCGATATTAGTTGGTCTGATCATCCAAGCTTACATTGGCTTTTCTT
CATTTATGTTGGTACAATCGTACGAGCCAAAGGAGAAAAATAAAGTCACGATAGGATACGCGATCTTTTGGTCCGCATTA
GGGATTTGTTACCTTTCGGGTAAGTCATTATTATTACCAATTGCGTTAGAAATAACCTCATTTTCTACAATCCTAATCTA
TTCAGGAACCGATTTTGGTAAAAAACAAATCGAAAGTTTGGGATCTTTATTGTTAGCATCAGGAATTTCTGCCTTATTTT
TGTCCGCATGGGTTATGTTACCTGATGGAGATATTCTAGGTGTCATCTTATTATTGATAGGTTTATTGATTAAATCTGGA
TTTTCCGGTTTTCACATTTGGATACCCAAAGTAAATGAAGGTGGCCCTTCTCATGCGCTTGGTTCATTTGCCGGCGTCTT
GGAAATCTTTCCATTATTGCTGTTTTATCGTTATGTTCTTCCAAATCAATTTGATCCATTGTTATATCAAGTATTGTTTC
CATTAGCTGCTCTTGGCATTTTTTTTGGAGGGATTACCAGTTTTTTTCATAAAGATCCAAAAATATCTTTGGCTTATAGT
TCAATCGAGTCACTGAATTTTTTATGGTTATGTTTGATTATATCAGGAATGTTTCAATTTTCAGTTGATGCTGAATTGAT
GAATTTAAGTAATTCTTTCAGGATATTGTTCTTTCTAGGTTTATTTCATCATTCATTTTCGAAAACATTCCAATTATTTT
CTATTGGAATGGTTTCAAGATTGATCAATTCAAATTCAAGTGATGAATTGAAAGGTATCGGTAGATTACTTGGAATCTCC
CCACTGTTACTTGGTGCGGGTACTTTTAGTTATGCGGTACTTCCTGGAACAATTGGGTTTGTCTCTGAGGCAACTTACTT
TTATCTTAATGCAAGAATATTGGATCTTCCAATTGGACGCTCTGTATTTTTATTGCCATCAATGATTTTTATATTTTTTG
GAATAGTCCTTGGAGGATTTACTCATATAAAATTATACATGAGTATGTTTTTATCTAAACCAATGGACAATTTGAAAATT
CTTCCTTTTGGGGTTTCGCAAAAGAGATGGTTATATATTTCACTTTTAAGCTTGGCATTAGTTATTTTTATTTTCCCACT
CTTGTTGCCATTCTTCGTTGAGTTACCAATGCTCAGACCATTTGCAGATGAATTATTGATTCAATGGTTTCATTCGATTT
CTATCGTTTCATTCATATCAATTATTATAGTGTTTATATTTATTCTTTATGATTATTTTAATGAAAAGAAATTTCAAACA
TTCAAGAAGAAAAGTTGGGATTGTGGAGGAGGTTATAACGGGCATGAGCTTTCCGTTCCTTCAACAGTCTTCTCTAAACC
ATTAAAAAATTCATTAGGTAGGTATTTCGTAAATAAAATCGGAGATTCAATTGTAGATGATTTAATTATTAAGTCGTTAA
CTTCTGTTTTTACATTCGGAACAAATTTTGTTTCTTCCACAAACCAAGCTAAAGATGAGGATATAAGTAAATATTTGGCA
ATCTCATCAATGTTTCTGATCTTTATCTTTTCCTTGCTGATTTTGGGCGATTTTTAG

Upstream 100 bases:

>100_bases
ATCATCATAAATTTTCCAATTTTTTGAAAATTAAAAATCTAAGGGGACCTCCCGTAATTACATAACCATCTTTTCTTGAT
TTTAAATCTTGAGGTAGTTT

Downstream 100 bases:

>100_bases
GTTATTTTATGGAAATGATTGTTTATTTTGCTTATTTAGTTATATTATTTTTTTGCCTTCCTTTTTTATTAACAGGGATT
GTTCGGAAGGTAAGAGCCTT

Product: hydrogenase-4 subunit C

Products: H2; oxidized ferredoxin [C]

Alternate protein names: Hydrogenase-4 Subunit C

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MLEDKNQSIIRSIVVGIAALAPLIIFLFTNEDILSVDFPILVGLIIQAYIGFSSFMLVQSYEPKEKNKVTIGYAIFWSAL
GICYLSGKSLLLPIALEITSFSTILIYSGTDFGKKQIESLGSLLLASGISALFLSAWVMLPDGDILGVILLLIGLLIKSG
FSGFHIWIPKVNEGGPSHALGSFAGVLEIFPLLLFYRYVLPNQFDPLLYQVLFPLAALGIFFGGITSFFHKDPKISLAYS
SIESLNFLWLCLIISGMFQFSVDAELMNLSNSFRILFFLGLFHHSFSKTFQLFSIGMVSRLINSNSSDELKGIGRLLGIS
PLLLGAGTFSYAVLPGTIGFVSEATYFYLNARILDLPIGRSVFLLPSMIFIFFGIVLGGFTHIKLYMSMFLSKPMDNLKI
LPFGVSQKRWLYISLLSLALVIFIFPLLLPFFVELPMLRPFADELLIQWFHSISIVSFISIIIVFIFILYDYFNEKKFQT
FKKKSWDCGGGYNGHELSVPSTVFSKPLKNSLGRYFVNKIGDSIVDDLIIKSLTSVFTFGTNFVSSTNQAKDEDISKYLA
ISSMFLIFIFSLLILGDF

Sequences:

>Translated_578_residues
MLEDKNQSIIRSIVVGIAALAPLIIFLFTNEDILSVDFPILVGLIIQAYIGFSSFMLVQSYEPKEKNKVTIGYAIFWSAL
GICYLSGKSLLLPIALEITSFSTILIYSGTDFGKKQIESLGSLLLASGISALFLSAWVMLPDGDILGVILLLIGLLIKSG
FSGFHIWIPKVNEGGPSHALGSFAGVLEIFPLLLFYRYVLPNQFDPLLYQVLFPLAALGIFFGGITSFFHKDPKISLAYS
SIESLNFLWLCLIISGMFQFSVDAELMNLSNSFRILFFLGLFHHSFSKTFQLFSIGMVSRLINSNSSDELKGIGRLLGIS
PLLLGAGTFSYAVLPGTIGFVSEATYFYLNARILDLPIGRSVFLLPSMIFIFFGIVLGGFTHIKLYMSMFLSKPMDNLKI
LPFGVSQKRWLYISLLSLALVIFIFPLLLPFFVELPMLRPFADELLIQWFHSISIVSFISIIIVFIFILYDYFNEKKFQT
FKKKSWDCGGGYNGHELSVPSTVFSKPLKNSLGRYFVNKIGDSIVDDLIIKSLTSVFTFGTNFVSSTNQAKDEDISKYLA
ISSMFLIFIFSLLILGDF
>Mature_578_residues
MLEDKNQSIIRSIVVGIAALAPLIIFLFTNEDILSVDFPILVGLIIQAYIGFSSFMLVQSYEPKEKNKVTIGYAIFWSAL
GICYLSGKSLLLPIALEITSFSTILIYSGTDFGKKQIESLGSLLLASGISALFLSAWVMLPDGDILGVILLLIGLLIKSG
FSGFHIWIPKVNEGGPSHALGSFAGVLEIFPLLLFYRYVLPNQFDPLLYQVLFPLAALGIFFGGITSFFHKDPKISLAYS
SIESLNFLWLCLIISGMFQFSVDAELMNLSNSFRILFFLGLFHHSFSKTFQLFSIGMVSRLINSNSSDELKGIGRLLGIS
PLLLGAGTFSYAVLPGTIGFVSEATYFYLNARILDLPIGRSVFLLPSMIFIFFGIVLGGFTHIKLYMSMFLSKPMDNLKI
LPFGVSQKRWLYISLLSLALVIFIFPLLLPFFVELPMLRPFADELLIQWFHSISIVSFISIIIVFIFILYDYFNEKKFQT
FKKKSWDCGGGYNGHELSVPSTVFSKPLKNSLGRYFVNKIGDSIVDDLIIKSLTSVFTFGTNFVSSTNQAKDEDISKYLA
ISSMFLIFIFSLLILGDF

Specific function: Unknown

COG id: COG0651

COG function: function code CP; Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 64472; Mature: 64472

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEDKNQSIIRSIVVGIAALAPLIIFLFTNEDILSVDFPILVGLIIQAYIGFSSFMLVQS
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHEEC
YEPKEKNKVTIGYAIFWSALGICYLSGKSLLLPIALEITSFSTILIYSGTDFGKKQIESL
CCCCCCCEEEEHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEECCCCCHHHHHHH
GSLLLASGISALFLSAWVMLPDGDILGVILLLIGLLIKSGFSGFHIWIPKVNEGGPSHAL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHH
GSFAGVLEIFPLLLFYRYVLPNQFDPLLYQVLFPLAALGIFFGGITSFFHKDPKISLAYS
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHH
SIESLNFLWLCLIISGMFQFSVDAELMNLSNSFRILFFLGLFHHSFSKTFQLFSIGMVSR
HHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LINSNSSDELKGIGRLLGISPLLLGAGTFSYAVLPGTIGFVSEATYFYLNARILDLPIGR
HHCCCCCHHHHHHHHHHCCCHHHHCCCCHHEEECCCCHHHHHCCEEEEEEEEEEECCCCC
SVFLLPSMIFIFFGIVLGGFTHIKLYMSMFLSKPMDNLKILPFGVSQKRWLYISLLSLAL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHH
VIFIFPLLLPFFVELPMLRPFADELLIQWFHSISIVSFISIIIVFIFILYDYFNEKKFQT
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
FKKKSWDCGGGYNGHELSVPSTVFSKPLKNSLGRYFVNKIGDSIVDDLIIKSLTSVFTFG
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TNFVSSTNQAKDEDISKYLAISSMFLIFIFSLLILGDF
CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLEDKNQSIIRSIVVGIAALAPLIIFLFTNEDILSVDFPILVGLIIQAYIGFSSFMLVQS
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHEEC
YEPKEKNKVTIGYAIFWSALGICYLSGKSLLLPIALEITSFSTILIYSGTDFGKKQIESL
CCCCCCCEEEEHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEECCCCCHHHHHHH
GSLLLASGISALFLSAWVMLPDGDILGVILLLIGLLIKSGFSGFHIWIPKVNEGGPSHAL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHH
GSFAGVLEIFPLLLFYRYVLPNQFDPLLYQVLFPLAALGIFFGGITSFFHKDPKISLAYS
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHH
SIESLNFLWLCLIISGMFQFSVDAELMNLSNSFRILFFLGLFHHSFSKTFQLFSIGMVSR
HHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LINSNSSDELKGIGRLLGISPLLLGAGTFSYAVLPGTIGFVSEATYFYLNARILDLPIGR
HHCCCCCHHHHHHHHHHCCCHHHHCCCCHHEEECCCCHHHHHCCEEEEEEEEEEECCCCC
SVFLLPSMIFIFFGIVLGGFTHIKLYMSMFLSKPMDNLKILPFGVSQKRWLYISLLSLAL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHH
VIFIFPLLLPFFVELPMLRPFADELLIQWFHSISIVSFISIIIVFIFILYDYFNEKKFQT
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
FKKKSWDCGGGYNGHELSVPSTVFSKPLKNSLGRYFVNKIGDSIVDDLIIKSLTSVFTFG
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TNFVSSTNQAKDEDISKYLAISSMFLIFIFSLLILGDF
CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton; reduced ferredoxin [C]

Specific reaction: Proton + reduced ferredoxin = H2 + oxidized ferredoxin [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA