| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is sasA [H]
Identifier: 183221712
GI number: 183221712
Start: 2410938
End: 2413349
Strand: Reverse
Name: sasA [H]
Synonym: LEPBI_I2340
Alternate gene names: 183221712
Gene position: 2413349-2410938 (Counterclockwise)
Preceding gene: 183221718
Following gene: 183221710
Centisome position: 67.04
GC content: 41.92
Gene sequence:
>2412_bases TTGGATGTGGAACGGATTCTCAGAGCAAACACATTCTCCCTTTTAGTCATCGTTTTCCTTTTTTTGCCATTGGCCCATTG CAACCGGAGTATCCCTTCTTTGGCTTCTGCCAAAACCATCCAAAATGGAATTTTGGACCTGACCGGGGAAGATCCAAAAA CCTTGGACCCATTCCCTTTGGCAGGTGAATGGCATGCCTTCCCAGGAGAATTGCCAGAAACAGAAGCCGAGTTCCAAGCA CTCGAAAAGAAAACACCTGTTCCGCTGGCTGTCCCTGCCTATTGGGTGAACCAAAACCTTCCCGCCCATGGTTATGTGAC CTACCGCTTACAATTAAAGGTAAAGGAGCCGATGAACCTCATGGTTTATTTACGAGAGGCATCATCTGCGTACAGATTGT ACTATTCCAATCCCGAACGTGGACTCGTCCTACTTGGATCGGCAGGCAAAGTTTCTAAAATCAAAGAAGATTCCATTGGG TATTATTTAGAAACAGGACGTTCGTTTCGTGCGACAAACGACACTGTCCTTTACTTACAAATTTCAAACTATTTGTACTC TCGAGGTGGTCCTTACTATTCACCAATTCTCGGTGAAGTAGGAAAAACGATCCTTTACCTTCGTTTCAAAGAAAGGAAAA AATCATTTTTCTTTGGAGCCTTTCTTGTGCTCGCCATCACACATTTATTCTTATACATCCATCGTAGAAAGGACAAATCC CCTCTTTGGTTTGCACTGCTTTGTTTTTCATGGCTTGTTCGCATTTTATTATTCGAACGAGTTTCCAGAGACTGGTTTGT GGGAAGTGACTTTCTTGAGATGTTTCAAATTCGTTTGGAATATTTAGCTTTTTGTGGGATCCAAATCTTCAGTTTACTTT TCTTTTTCCATGTCCAACCACATTTGGTTCCAAACAAATTCAAACGGTATTTGCTCGTTCCCATCCTACTTGAGATTCTC ATCATACTCACGTCACCGTACGCTGTGTACACAAAATTACTTGTGTTTAGCCAAGCTTACATGGTTGTGATTTTAATTTT AGCCTTTATTGCCGCGGTAAGGTCTACTTTCCAAAGAGAAACACGTTATGTGGGAGCATTCATCACGTTTGGTACATTTG TGATCTTATCTGCAACCATTTACGATTCAGTTGTTTTTTTCAAACGATGGGACCTACCTCTCATCACTGATTTAGGATTT GGAATCTTTTGTATGTGCCTTGCCATTGTGATTTCCAAACAAAATGCGCATACCTGGGAAACGGCAGAATACCTTACCTT AAATTTACGCAAAGAAGTAGAATGGAAAACCTTAGAGCTTAAAAAAGAAAAAGAAAAGGCTGAAAAAACAGGGGAATTAA AAGATAAATTTATCTCCATCGTCTCTCACGACATTCGTTCTCCCCTTTTTGGAATCTCGTCCGTTGTCAATTTACTCACA GAATCACCACCCTCCCTTTCTCCAGAAAGAGCCAAACAAGTGCTTGGCGAAGCATCCACTGGTCTCAAAAACATTCTCAG TATGGTGGAAGAACTCATCAAATACTCACGATTTCAAAATGCAGCTGTATTTCCTGATTACCAACTTTTTGACTTCCGTC AAATCACAGACCAACTCATTGAACGAGTACAGGAAATGGCAAAACCTAAAAACATCACCATCCTGACGCAAATGGAGGAA TCCTCCATTGGGATTGGAGACCCTAATCTCATTGAACATTTGATCTGGAACCTACTTACGAATGCAGTTAAGTTCACAAA AGAGTCGGCAACAGTCGAAGTTTCACTCACCGAATCGAATAAGTATTGGAGCCTCAAGGTGACAGACACTGGGATTGGGA TGCCGAAATACTGGACCGAACATGTGTTAGAAGAAGGATTTTTGTTTGTACGCAAAGGTACAGCGGACGAAATGGGAGCC GGGGTTGGCTTAGCGTTTTGTCGCGAAGTGGCAGAACGACATGGGGCAAGTCTTCTTGTCCAATCAGAGGAAGAGAAAGG AACATCGGTTGAGCTCCTCCTTCCCAATTTTGAAAAAATTGTCCTCATCCTCGACGACAACCCAGGTTACCGCAAACAAA TCCGAAAGGTCTTAAAAGACATCCCTTGTATCATTTGGGAAGAGGAATACCCAGATCACGCCTTGTATTCAGTCTCAAGG TTAAAACCTGATCTCATCATCGTGGACTTTTCCATGCCGGATAAAACAGGGATCGATTTTTTAAGGGATTTGTATTCTAA TTCCGAAATGGAAGAAATTCGTTCTATGCTCGTATCGAGTTCTCATACAGATCCAAACACAGGTTATAAATTAGAAACAG AAGTGATCGATCTTGGGGGAGATGCTTTTTTAACAAAAACATCCCCCGATCAAAAGATGGTCGAACTTGTGAAGAGACTG CTCGACCTTTGA
Upstream 100 bases:
>100_bases CGGCATTTCCAAGTGATCCTTTGGTTCGTTCTGCCATTTCCCCGAAATTTCTCGTAGAACTCCTAATAAGATTTGAGTTT TTCCAATTTCTTTTTAAGAT
Downstream 100 bases:
>100_bases GGTTTAGATTAACATTTGTTCTTTGGCGCGACCAATGAGTTCCGCAACGGTTTTCGCATTGAATCTGTCTTTCAAACGTC CGACATGGTATTCTACCGTT
Product: ATPase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 803; Mature: 803
Protein sequence:
>803_residues MDVERILRANTFSLLVIVFLFLPLAHCNRSIPSLASAKTIQNGILDLTGEDPKTLDPFPLAGEWHAFPGELPETEAEFQA LEKKTPVPLAVPAYWVNQNLPAHGYVTYRLQLKVKEPMNLMVYLREASSAYRLYYSNPERGLVLLGSAGKVSKIKEDSIG YYLETGRSFRATNDTVLYLQISNYLYSRGGPYYSPILGEVGKTILYLRFKERKKSFFFGAFLVLAITHLFLYIHRRKDKS PLWFALLCFSWLVRILLFERVSRDWFVGSDFLEMFQIRLEYLAFCGIQIFSLLFFFHVQPHLVPNKFKRYLLVPILLEIL IILTSPYAVYTKLLVFSQAYMVVILILAFIAAVRSTFQRETRYVGAFITFGTFVILSATIYDSVVFFKRWDLPLITDLGF GIFCMCLAIVISKQNAHTWETAEYLTLNLRKEVEWKTLELKKEKEKAEKTGELKDKFISIVSHDIRSPLFGISSVVNLLT ESPPSLSPERAKQVLGEASTGLKNILSMVEELIKYSRFQNAAVFPDYQLFDFRQITDQLIERVQEMAKPKNITILTQMEE SSIGIGDPNLIEHLIWNLLTNAVKFTKESATVEVSLTESNKYWSLKVTDTGIGMPKYWTEHVLEEGFLFVRKGTADEMGA GVGLAFCREVAERHGASLLVQSEEEKGTSVELLLPNFEKIVLILDDNPGYRKQIRKVLKDIPCIIWEEEYPDHALYSVSR LKPDLIIVDFSMPDKTGIDFLRDLYSNSEMEEIRSMLVSSSHTDPNTGYKLETEVIDLGGDAFLTKTSPDQKMVELVKRL LDL
Sequences:
>Translated_803_residues MDVERILRANTFSLLVIVFLFLPLAHCNRSIPSLASAKTIQNGILDLTGEDPKTLDPFPLAGEWHAFPGELPETEAEFQA LEKKTPVPLAVPAYWVNQNLPAHGYVTYRLQLKVKEPMNLMVYLREASSAYRLYYSNPERGLVLLGSAGKVSKIKEDSIG YYLETGRSFRATNDTVLYLQISNYLYSRGGPYYSPILGEVGKTILYLRFKERKKSFFFGAFLVLAITHLFLYIHRRKDKS PLWFALLCFSWLVRILLFERVSRDWFVGSDFLEMFQIRLEYLAFCGIQIFSLLFFFHVQPHLVPNKFKRYLLVPILLEIL IILTSPYAVYTKLLVFSQAYMVVILILAFIAAVRSTFQRETRYVGAFITFGTFVILSATIYDSVVFFKRWDLPLITDLGF GIFCMCLAIVISKQNAHTWETAEYLTLNLRKEVEWKTLELKKEKEKAEKTGELKDKFISIVSHDIRSPLFGISSVVNLLT ESPPSLSPERAKQVLGEASTGLKNILSMVEELIKYSRFQNAAVFPDYQLFDFRQITDQLIERVQEMAKPKNITILTQMEE SSIGIGDPNLIEHLIWNLLTNAVKFTKESATVEVSLTESNKYWSLKVTDTGIGMPKYWTEHVLEEGFLFVRKGTADEMGA GVGLAFCREVAERHGASLLVQSEEEKGTSVELLLPNFEKIVLILDDNPGYRKQIRKVLKDIPCIIWEEEYPDHALYSVSR LKPDLIIVDFSMPDKTGIDFLRDLYSNSEMEEIRSMLVSSSHTDPNTGYKLETEVIDLGGDAFLTKTSPDQKMVELVKRL LDL >Mature_803_residues MDVERILRANTFSLLVIVFLFLPLAHCNRSIPSLASAKTIQNGILDLTGEDPKTLDPFPLAGEWHAFPGELPETEAEFQA LEKKTPVPLAVPAYWVNQNLPAHGYVTYRLQLKVKEPMNLMVYLREASSAYRLYYSNPERGLVLLGSAGKVSKIKEDSIG YYLETGRSFRATNDTVLYLQISNYLYSRGGPYYSPILGEVGKTILYLRFKERKKSFFFGAFLVLAITHLFLYIHRRKDKS PLWFALLCFSWLVRILLFERVSRDWFVGSDFLEMFQIRLEYLAFCGIQIFSLLFFFHVQPHLVPNKFKRYLLVPILLEIL IILTSPYAVYTKLLVFSQAYMVVILILAFIAAVRSTFQRETRYVGAFITFGTFVILSATIYDSVVFFKRWDLPLITDLGF GIFCMCLAIVISKQNAHTWETAEYLTLNLRKEVEWKTLELKKEKEKAEKTGELKDKFISIVSHDIRSPLFGISSVVNLLT ESPPSLSPERAKQVLGEASTGLKNILSMVEELIKYSRFQNAAVFPDYQLFDFRQITDQLIERVQEMAKPKNITILTQMEE SSIGIGDPNLIEHLIWNLLTNAVKFTKESATVEVSLTESNKYWSLKVTDTGIGMPKYWTEHVLEEGFLFVRKGTADEMGA GVGLAFCREVAERHGASLLVQSEEEKGTSVELLLPNFEKIVLILDDNPGYRKQIRKVLKDIPCIIWEEEYPDHALYSVSR LKPDLIIVDFSMPDKTGIDFLRDLYSNSEMEEIRSMLVSSSHTDPNTGYKLETEVIDLGGDAFLTKTSPDQKMVELVKRL LDL
Specific function: May be involved in signal transduction. Participates in the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with kaiC. Required for robustness of the circadian rhythm of gene expression an
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI87081816, Length=335, Percent_Identity=25.3731343283582, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI48994928, Length=392, Percent_Identity=24.4897959183673, Blast_Score=91, Evalue=4e-19, Organism=Escherichia coli, GI1790861, Length=223, Percent_Identity=27.8026905829596, Blast_Score=86, Evalue=1e-17, Organism=Escherichia coli, GI1788713, Length=335, Percent_Identity=25.0746268656716, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI145693157, Length=238, Percent_Identity=23.5294117647059, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI1789149, Length=287, Percent_Identity=22.2996515679443, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1790436, Length=236, Percent_Identity=25.4237288135593, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1786912, Length=257, Percent_Identity=23.3463035019455, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1788393, Length=228, Percent_Identity=19.7368421052632, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011649 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF07689 KaiB [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 91875; Mature: 91875
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVERILRANTFSLLVIVFLFLPLAHCNRSIPSLASAKTIQNGILDLTGEDPKTLDPFPL CCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCC AGEWHAFPGELPETEAEFQALEKKTPVPLAVPAYWVNQNLPAHGYVTYRLQLKVKEPMNL CCCCCCCCCCCCCCHHHHHHHHCCCCCCEEECHHHHCCCCCCCCEEEEEEEEEECCCCEE MVYLREASSAYRLYYSNPERGLVLLGSAGKVSKIKEDSIGYYLETGRSFRATNDTVLYLQ EEEEEECCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEECCCCEECCCCEEEEEE ISNYLYSRGGPYYSPILGEVGKTILYLRFKERKKSFFFGAFLVLAITHLFLYIHRRKDKS ECHHHHHCCCCCHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PLWFALLCFSWLVRILLFERVSRDWFVGSDFLEMFQIRLEYLAFCGIQIFSLLFFFHVQP CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HLVPNKFKRYLLVPILLEILIILTSPYAVYTKLLVFSQAYMVVILILAFIAAVRSTFQRE CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRYVGAFITFGTFVILSATIYDSVVFFKRWDLPLITDLGFGIFCMCLAIVISKQNAHTWE HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHCCHHHHHHHHHHHHCCCCCCCCC TAEYLTLNLRKEVEWKTLELKKEKEKAEKTGELKDKFISIVSHDIRSPLFGISSVVNLLT CHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH ESPPSLSPERAKQVLGEASTGLKNILSMVEELIKYSRFQNAAVFPDYQLFDFRQITDQLI CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH ERVQEMAKPKNITILTQMEESSIGIGDPNLIEHLIWNLLTNAVKFTKESATVEVSLTESN HHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC KYWSLKVTDTGIGMPKYWTEHVLEEGFLFVRKGTADEMGAGVGLAFCREVAERHGASLLV CEEEEEEECCCCCCCHHHHHHHHHCCEEEEECCCHHHHCCCHHHHHHHHHHHHCCCEEEE QSEEEKGTSVELLLPNFEKIVLILDDNPGYRKQIRKVLKDIPCIIWEEEYPDHALYSVSR ECCCCCCCEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHH LKPDLIIVDFSMPDKTGIDFLRDLYSNSEMEEIRSMLVSSSHTDPNTGYKLETEVIDLGG CCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCC DAFLTKTSPDQKMVELVKRLLDL CEEEECCCCCHHHHHHHHHHHCC >Mature Secondary Structure MDVERILRANTFSLLVIVFLFLPLAHCNRSIPSLASAKTIQNGILDLTGEDPKTLDPFPL CCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCC AGEWHAFPGELPETEAEFQALEKKTPVPLAVPAYWVNQNLPAHGYVTYRLQLKVKEPMNL CCCCCCCCCCCCCCHHHHHHHHCCCCCCEEECHHHHCCCCCCCCEEEEEEEEEECCCCEE MVYLREASSAYRLYYSNPERGLVLLGSAGKVSKIKEDSIGYYLETGRSFRATNDTVLYLQ EEEEEECCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEECCCCEECCCCEEEEEE ISNYLYSRGGPYYSPILGEVGKTILYLRFKERKKSFFFGAFLVLAITHLFLYIHRRKDKS ECHHHHHCCCCCHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PLWFALLCFSWLVRILLFERVSRDWFVGSDFLEMFQIRLEYLAFCGIQIFSLLFFFHVQP CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HLVPNKFKRYLLVPILLEILIILTSPYAVYTKLLVFSQAYMVVILILAFIAAVRSTFQRE CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRYVGAFITFGTFVILSATIYDSVVFFKRWDLPLITDLGFGIFCMCLAIVISKQNAHTWE HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHCCHHHHHHHHHHHHCCCCCCCCC TAEYLTLNLRKEVEWKTLELKKEKEKAEKTGELKDKFISIVSHDIRSPLFGISSVVNLLT CHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH ESPPSLSPERAKQVLGEASTGLKNILSMVEELIKYSRFQNAAVFPDYQLFDFRQITDQLI CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH ERVQEMAKPKNITILTQMEESSIGIGDPNLIEHLIWNLLTNAVKFTKESATVEVSLTESN HHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC KYWSLKVTDTGIGMPKYWTEHVLEEGFLFVRKGTADEMGAGVGLAFCREVAERHGASLLV CEEEEEEECCCCCCCHHHHHHHHHCCEEEEECCCHHHHCCCHHHHHHHHHHHHCCCEEEE QSEEEKGTSVELLLPNFEKIVLILDDNPGYRKQIRKVLKDIPCIIWEEEYPDHALYSVSR ECCCCCCCEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHH LKPDLIIVDFSMPDKTGIDFLRDLYSNSEMEEIRSMLVSSSHTDPNTGYKLETEVIDLGG CCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCC DAFLTKTSPDQKMVELVKRLLDL CEEEECCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]