| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is malL [H]
Identifier: 183221659
GI number: 183221659
Start: 2349878
End: 2351329
Strand: Reverse
Name: malL [H]
Synonym: LEPBI_I2284
Alternate gene names: 183221659
Gene position: 2351329-2349878 (Counterclockwise)
Preceding gene: 183221661
Following gene: 183221658
Centisome position: 65.32
GC content: 36.85
Gene sequence:
>1452_bases ATGGAAAACAAGATGGAATGGTGGAAACAAACTTCAATTTACCAGATTTACCCTTGGTCATTTCAGGATTCGAACGGGGA TGGGATCGGTGATTTAGCGGGAATCCTTGGGCGTTTGGACGAGATTCAAGAATTAGGAGTTGAAACCATTTGGTTTTCTC CTTTTTACCGAAGTCCAGGTGAGGACTTTGGTTATGATATTTCGGATTACACAACCATAGATCCAAGGTTTGGCACGATG GCGGACACTGAACGGCTCATCAAAGAAATCCACAAACGAAAGATGAAAGTGGTCCTCGATATGGTGATGAACCACACTTC AGACAAACACCCTTGGTTTTTGGAATCTAAGTCCTCTACTTCAAATCCGAAACGTGATTTTTACATTTGGAGAAAGGGTA CAAAAAAACCACCCAATAATTGGATCTCCATGGTAGGCAAATCAGGATGGAATTACGATCCACAGACAGAAGAATACTAT TACAGCAATTTTTTATCCTTCCAACCAGACCTAAATTATCGAAATCCTAAAGTCAAACAAACTATGTTGAAAGTTCTAGA CTTTTGGTTACAAAAAGGCGTGGATGGATTTCGTCTTGATATCTTCAATTCAATTTATAAAGATGAAAGTTTTCGCGACA ATCCATTTAGTTTACGTTTTTTCCCAACACCAGATAACCACGATGAGGCTTTTTTTCAAAAAAAGAAATACAACTTAAAC TTATCGGAATCTTTTACGTTTGCCAAAGAAGTTCGAAAACACATTTCTAAATACAAACAAAAACCTTTCCTCATCGGTGA AGTGAGTGGATCTGACACTATACTCAAATCATTTTTAGGAGAAAAATTAGATGGTCTCAATTTAGTATTCCAATTTGAAC TGATCCATTTTCAATACAAATCAAAGTTCTTTCGAAATCTACTGGAAAAAAATGAAACCATATTTCCGAGTCCTTACACA CCTACCTATGTATTAGGAAATCATGACCAGAGGCGTTATATAGATCGGTTAGGTGGAGACCAAAGGAAAGCAAAACTATT AGCCTGTTTTCAGTTTATGGCAAGGGGAGTTCCGATCGTTTATTATGGTGAAGAAATAGGACTGAGAGAAGGAAAAATTT CCAATTTTAAGGGCAAAGATCCAATTGCGAAAATGAATTCATTTGTTCCTTTATTTTTAAGTAATTTACTTGGGATTTAT ATCAATCGTGACAATTGTCGTCTGCCAATGTTATGGGATGATTCGAAATATGGTGGATTCACAACGGGTGTACCTTGGTT ACCGATCGGATCCATCAATCCAAAGAATACAGTATTGGAACAAAAAAAAACATTCAGACTCATTATGGAAACATTACCAA ACTCTATTCCAACTACGAAAAAAATGGAAGGTGATCAGAGAGGGAAGTTTGAGAACAATTCCAACAGAGAAAGACGATGT TCTGTGTTTTGA
Upstream 100 bases:
>100_bases TGATTTTTTCTTTATCCATTGCTACCTGCTTGTATAAAGAACAGAAATTCGGTGATTAGGTAAGAAGCAACTGAAATAAC AAAGGGGTGATAGAAAAGTC
Downstream 100 bases:
>100_bases ACGTAGTCTGAAAGAAAACACGTTACGTGTGTTTTTAAACTTTGGAACAAAAGAAGTGCGTTTGACCTCCTTAGGAAAAG GAAACGATTTGTATGTATTT
Product: putative O-glycosyl hydrolase
Products: NA
Alternate protein names: Dextrin 6-alpha-D-glucanohydrolase; Oligosaccharide alpha-1,6-glucosidase; Sucrase-isomaltase; Isomaltase [H]
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MENKMEWWKQTSIYQIYPWSFQDSNGDGIGDLAGILGRLDEIQELGVETIWFSPFYRSPGEDFGYDISDYTTIDPRFGTM ADTERLIKEIHKRKMKVVLDMVMNHTSDKHPWFLESKSSTSNPKRDFYIWRKGTKKPPNNWISMVGKSGWNYDPQTEEYY YSNFLSFQPDLNYRNPKVKQTMLKVLDFWLQKGVDGFRLDIFNSIYKDESFRDNPFSLRFFPTPDNHDEAFFQKKKYNLN LSESFTFAKEVRKHISKYKQKPFLIGEVSGSDTILKSFLGEKLDGLNLVFQFELIHFQYKSKFFRNLLEKNETIFPSPYT PTYVLGNHDQRRYIDRLGGDQRKAKLLACFQFMARGVPIVYYGEEIGLREGKISNFKGKDPIAKMNSFVPLFLSNLLGIY INRDNCRLPMLWDDSKYGGFTTGVPWLPIGSINPKNTVLEQKKTFRLIMETLPNSIPTTKKMEGDQRGKFENNSNRERRC SVF
Sequences:
>Translated_483_residues MENKMEWWKQTSIYQIYPWSFQDSNGDGIGDLAGILGRLDEIQELGVETIWFSPFYRSPGEDFGYDISDYTTIDPRFGTM ADTERLIKEIHKRKMKVVLDMVMNHTSDKHPWFLESKSSTSNPKRDFYIWRKGTKKPPNNWISMVGKSGWNYDPQTEEYY YSNFLSFQPDLNYRNPKVKQTMLKVLDFWLQKGVDGFRLDIFNSIYKDESFRDNPFSLRFFPTPDNHDEAFFQKKKYNLN LSESFTFAKEVRKHISKYKQKPFLIGEVSGSDTILKSFLGEKLDGLNLVFQFELIHFQYKSKFFRNLLEKNETIFPSPYT PTYVLGNHDQRRYIDRLGGDQRKAKLLACFQFMARGVPIVYYGEEIGLREGKISNFKGKDPIAKMNSFVPLFLSNLLGIY INRDNCRLPMLWDDSKYGGFTTGVPWLPIGSINPKNTVLEQKKTFRLIMETLPNSIPTTKKMEGDQRGKFENNSNRERRC SVF >Mature_483_residues MENKMEWWKQTSIYQIYPWSFQDSNGDGIGDLAGILGRLDEIQELGVETIWFSPFYRSPGEDFGYDISDYTTIDPRFGTM ADTERLIKEIHKRKMKVVLDMVMNHTSDKHPWFLESKSSTSNPKRDFYIWRKGTKKPPNNWISMVGKSGWNYDPQTEEYY YSNFLSFQPDLNYRNPKVKQTMLKVLDFWLQKGVDGFRLDIFNSIYKDESFRDNPFSLRFFPTPDNHDEAFFQKKKYNLN LSESFTFAKEVRKHISKYKQKPFLIGEVSGSDTILKSFLGEKLDGLNLVFQFELIHFQYKSKFFRNLLEKNETIFPSPYT PTYVLGNHDQRRYIDRLGGDQRKAKLLACFQFMARGVPIVYYGEEIGLREGKISNFKGKDPIAKMNSFVPLFLSNLLGIY INRDNCRLPMLWDDSKYGGFTTGVPWLPIGSINPKNTVLEQKKTFRLIMETLPNSIPTTKKMEGDQRGKFENNSNRERRC SVF
Specific function: Unknown
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Homo sapiens, GI187423904, Length=451, Percent_Identity=32.1507760532151, Blast_Score=233, Evalue=2e-61, Organism=Homo sapiens, GI61744475, Length=206, Percent_Identity=24.2718446601942, Blast_Score=66, Evalue=6e-11, Organism=Homo sapiens, GI65506891, Length=206, Percent_Identity=24.2718446601942, Blast_Score=66, Evalue=8e-11, Organism=Homo sapiens, GI61744477, Length=206, Percent_Identity=24.2718446601942, Blast_Score=66, Evalue=8e-11, Organism=Homo sapiens, GI61744479, Length=206, Percent_Identity=24.2718446601942, Blast_Score=66, Evalue=8e-11, Organism=Homo sapiens, GI61744481, Length=206, Percent_Identity=24.2718446601942, Blast_Score=66, Evalue=9e-11, Organism=Homo sapiens, GI61744483, Length=206, Percent_Identity=24.2718446601942, Blast_Score=66, Evalue=9e-11, Organism=Escherichia coli, GI1790687, Length=473, Percent_Identity=34.2494714587738, Blast_Score=262, Evalue=4e-71, Organism=Escherichia coli, GI1786604, Length=369, Percent_Identity=23.8482384823848, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1789995, Length=91, Percent_Identity=37.3626373626374, Blast_Score=62, Evalue=9e-11, Organism=Caenorhabditis elegans, GI25147709, Length=474, Percent_Identity=26.3713080168776, Blast_Score=131, Evalue=7e-31, Organism=Caenorhabditis elegans, GI32565753, Length=392, Percent_Identity=27.2959183673469, Blast_Score=114, Evalue=8e-26, Organism=Saccharomyces cerevisiae, GI6322245, Length=475, Percent_Identity=35.5789473684211, Blast_Score=254, Evalue=3e-68, Organism=Saccharomyces cerevisiae, GI6321726, Length=472, Percent_Identity=33.4745762711864, Blast_Score=234, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6319776, Length=488, Percent_Identity=34.8360655737705, Blast_Score=234, Evalue=3e-62, Organism=Saccharomyces cerevisiae, GI6321731, Length=488, Percent_Identity=34.6311475409836, Blast_Score=233, Evalue=5e-62, Organism=Saccharomyces cerevisiae, GI6324416, Length=471, Percent_Identity=32.484076433121, Blast_Score=233, Evalue=6e-62, Organism=Saccharomyces cerevisiae, GI6322241, Length=471, Percent_Identity=32.484076433121, Blast_Score=233, Evalue=7e-62, Organism=Saccharomyces cerevisiae, GI6322021, Length=471, Percent_Identity=32.484076433121, Blast_Score=233, Evalue=7e-62, Organism=Drosophila melanogaster, GI24586591, Length=444, Percent_Identity=35.1351351351351, Blast_Score=277, Evalue=1e-74, Organism=Drosophila melanogaster, GI221330053, Length=465, Percent_Identity=34.4086021505376, Blast_Score=272, Evalue=3e-73, Organism=Drosophila melanogaster, GI24583747, Length=448, Percent_Identity=37.2767857142857, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI24583749, Length=448, Percent_Identity=37.2767857142857, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI24583745, Length=474, Percent_Identity=33.3333333333333, Blast_Score=257, Evalue=1e-68, Organism=Drosophila melanogaster, GI24586593, Length=460, Percent_Identity=35.6521739130435, Blast_Score=256, Evalue=2e-68, Organism=Drosophila melanogaster, GI24586589, Length=447, Percent_Identity=35.1230425055928, Blast_Score=251, Evalue=1e-66, Organism=Drosophila melanogaster, GI24586587, Length=446, Percent_Identity=33.6322869955157, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI24586597, Length=478, Percent_Identity=32.0083682008368, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI24586599, Length=453, Percent_Identity=33.9955849889625, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI45549022, Length=464, Percent_Identity=33.6206896551724, Blast_Score=239, Evalue=3e-63, Organism=Drosophila melanogaster, GI281360393, Length=403, Percent_Identity=33.4987593052109, Blast_Score=191, Evalue=1e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR006589 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =3.2.1.10 [H]
Molecular weight: Translated: 56728; Mature: 56728
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENKMEWWKQTSIYQIYPWSFQDSNGDGIGDLAGILGRLDEIQELGVETIWFSPFYRSPG CCCHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHCCCC EDFGYDISDYTTIDPRFGTMADTERLIKEIHKRKMKVVLDMVMNHTSDKHPWFLESKSST CCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCC SNPKRDFYIWRKGTKKPPNNWISMVGKSGWNYDPQTEEYYYSNFLSFQPDLNYRNPKVKQ CCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHH TMLKVLDFWLQKGVDGFRLDIFNSIYKDESFRDNPFSLRFFPTPDNHDEAFFQKKKYNLN HHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCC LSESFTFAKEVRKHISKYKQKPFLIGEVSGSDTILKSFLGEKLDGLNLVFQFELIHFQYK CHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEEEEHHHHHHH SKFFRNLLEKNETIFPSPYTPTYVLGNHDQRRYIDRLGGDQRKAKLLACFQFMARGVPIV HHHHHHHHHCCCEECCCCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEE YYGEEIGLREGKISNFKGKDPIAKMNSFVPLFLSNLLGIYINRDNCRLPMLWDDSKYGGF EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCE TTGVPWLPIGSINPKNTVLEQKKTFRLIMETLPNSIPTTKKMEGDQRGKFENNSNRERRC ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SVF CCC >Mature Secondary Structure MENKMEWWKQTSIYQIYPWSFQDSNGDGIGDLAGILGRLDEIQELGVETIWFSPFYRSPG CCCHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHCCCC EDFGYDISDYTTIDPRFGTMADTERLIKEIHKRKMKVVLDMVMNHTSDKHPWFLESKSST CCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCC SNPKRDFYIWRKGTKKPPNNWISMVGKSGWNYDPQTEEYYYSNFLSFQPDLNYRNPKVKQ CCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHH TMLKVLDFWLQKGVDGFRLDIFNSIYKDESFRDNPFSLRFFPTPDNHDEAFFQKKKYNLN HHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCC LSESFTFAKEVRKHISKYKQKPFLIGEVSGSDTILKSFLGEKLDGLNLVFQFELIHFQYK CHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEEEEHHHHHHH SKFFRNLLEKNETIFPSPYTPTYVLGNHDQRRYIDRLGGDQRKAKLLACFQFMARGVPIV HHHHHHHHHCCCEECCCCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEE YYGEEIGLREGKISNFKGKDPIAKMNSFVPLFLSNLLGIYINRDNCRLPMLWDDSKYGGF EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCE TTGVPWLPIGSINPKNTVLEQKKTFRLIMETLPNSIPTTKKMEGDQRGKFENNSNRERRC ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SVF CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2120057; 8370659; 9193006 [H]