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The map label for this gene is arnC [H]

Identifier: 183221656

GI number: 183221656

Start: 2348524

End: 2349282

Strand: Direct

Name: arnC [H]

Synonym: LEPBI_I2281

Alternate gene names: 183221656

Gene position: 2348524-2349282 (Clockwise)

Preceding gene: 183221655

Following gene: 183221657

Centisome position: 65.24

GC content: 35.7

Gene sequence:

>759_bases
ATGAAAGATAAAACAAGTATTATACTCCCCACCTACAACGAAGCAGGTAATATCAAAAACTGCGTTGAAACAATCTCAAA
TATACTAGAAAAAAATAGTTTAAACTTTGAAATCATCATCGTAGATGATAATTCACCTGATGGGACATTCGAAGTAGCCA
AAGTGTTAGCAAAATATGACAATCGAATCAAACCATTTGTCAGGACGACCGAAAAAGGTTTGAGTTCTGCTGTTACGTAT
GGATATGAAAAAGCATCTGGTGAACATTATGTCGTAGTGGATGCTGATTTTCAACATGACTATTCAAAAATCCCAGATGT
CATTCGATTGCTGAAGGATAATGATATTGTTGTGGCGACTCGTAGGAGCCAAGATGGCGGTTATGGTAATTTTCCCATCT
TACGAAAGTTAGCGAGTCTTTTTGCAACTAAAATTTCTGAGTGGTTATTTCCAGTAAAAATTTCTGATCCCATGAGTGGT
TTTTTTGGAATTCGAAAATCCATTTATTTTGATACAAAAGACAAACTGCACCCACGTGGTTATAAGATCCTTTTTGAAAT
TTTGGGTGTGGTGAAAACGGAAAAAATTGCAGAAATTGGTTATACGTTTGGACTTCGTACATGGGGCCATTCCAAACTTG
ATTCAGGTGTGATCTTTTATTTCCTTTGGGACTTGATTTCAATCAAATGGTATCAATGGAAACAATCTCACCAATATTTT
TTTGGATCCAAAAGAACAAAATCCCATATCCATCCCTAG

Upstream 100 bases:

>100_bases
TGTTCTCAATCCATTCTTACGTCCTGCCAATCGGGTGAAATCTGCATTAAAAATTTAACAAAGGGGCTTTTTTAATTTTT
AAAAAGTTGAATGACCAGTC

Downstream 100 bases:

>100_bases
TGGAACTTGAGAGTCTCTTAAAAAAAAACGTAAAGAATGTTTTTATTTTAAGGTTTATTTTTTATCATGAACCCTAAGGT
ATTTCGATTGGATTCCGTAG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKDKTSIILPTYNEAGNIKNCVETISNILEKNSLNFEIIIVDDNSPDGTFEVAKVLAKYDNRIKPFVRTTEKGLSSAVTY
GYEKASGEHYVVVDADFQHDYSKIPDVIRLLKDNDIVVATRRSQDGGYGNFPILRKLASLFATKISEWLFPVKISDPMSG
FFGIRKSIYFDTKDKLHPRGYKILFEILGVVKTEKIAEIGYTFGLRTWGHSKLDSGVIFYFLWDLISIKWYQWKQSHQYF
FGSKRTKSHIHP

Sequences:

>Translated_252_residues
MKDKTSIILPTYNEAGNIKNCVETISNILEKNSLNFEIIIVDDNSPDGTFEVAKVLAKYDNRIKPFVRTTEKGLSSAVTY
GYEKASGEHYVVVDADFQHDYSKIPDVIRLLKDNDIVVATRRSQDGGYGNFPILRKLASLFATKISEWLFPVKISDPMSG
FFGIRKSIYFDTKDKLHPRGYKILFEILGVVKTEKIAEIGYTFGLRTWGHSKLDSGVIFYFLWDLISIKWYQWKQSHQYF
FGSKRTKSHIHP
>Mature_252_residues
MKDKTSIILPTYNEAGNIKNCVETISNILEKNSLNFEIIIVDDNSPDGTFEVAKVLAKYDNRIKPFVRTTEKGLSSAVTY
GYEKASGEHYVVVDADFQHDYSKIPDVIRLLKDNDIVVATRRSQDGGYGNFPILRKLASLFATKISEWLFPVKISDPMSG
FFGIRKSIYFDTKDKLHPRGYKILFEILGVVKTEKIAEIGYTFGLRTWGHSKLDSGVIFYFLWDLISIKWYQWKQSHQYF
FGSKRTKSHIHP

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=235, Percent_Identity=33.1914893617021, Blast_Score=114, Evalue=1e-25,
Organism=Escherichia coli, GI1788692, Length=159, Percent_Identity=28.9308176100629, Blast_Score=60, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI71999402, Length=236, Percent_Identity=33.8983050847458, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6325441, Length=250, Percent_Identity=33.2, Blast_Score=129, Evalue=4e-31,
Organism=Drosophila melanogaster, GI24585265, Length=229, Percent_Identity=33.6244541484716, Blast_Score=110, Evalue=9e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 28968; Mature: 28968

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDKTSIILPTYNEAGNIKNCVETISNILEKNSLNFEIIIVDDNSPDGTFEVAKVLAKYD
CCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHC
NRIKPFVRTTEKGLSSAVTYGYEKASGEHYVVVDADFQHDYSKIPDVIRLLKDNDIVVAT
CCCCHHHHHHHHHHHHHHHHCHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEE
RRSQDGGYGNFPILRKLASLFATKISEWLFPVKISDPMSGFFGIRKSIYFDTKDKLHPRG
ECCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHEEECCCCCCCCCH
YKILFEILGVVKTEKIAEIGYTFGLRTWGHSKLDSGVIFYFLWDLISIKWYQWKQSHQYF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE
FGSKRTKSHIHP
CCCCCCCCCCCC
>Mature Secondary Structure
MKDKTSIILPTYNEAGNIKNCVETISNILEKNSLNFEIIIVDDNSPDGTFEVAKVLAKYD
CCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHC
NRIKPFVRTTEKGLSSAVTYGYEKASGEHYVVVDADFQHDYSKIPDVIRLLKDNDIVVAT
CCCCHHHHHHHHHHHHHHHHCHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEE
RRSQDGGYGNFPILRKLASLFATKISEWLFPVKISDPMSGFFGIRKSIYFDTKDKLHPRG
ECCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHEEECCCCCCCCCH
YKILFEILGVVKTEKIAEIGYTFGLRTWGHSKLDSGVIFYFLWDLISIKWYQWKQSHQYF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE
FGSKRTKSHIHP
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA