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The map label for this gene is yagA [H]

Identifier: 183221638

GI number: 183221638

Start: 2333518

End: 2333970

Strand: Direct

Name: yagA [H]

Synonym: LEPBI_I2262

Alternate gene names: 183221638

Gene position: 2333518-2333970 (Clockwise)

Preceding gene: 183221637

Following gene: 183221639

Centisome position: 64.83

GC content: 36.64

Gene sequence:

>453_bases
TTGGGGATGCCTTGGAAGGAGTTTAATATCGTGGATTTAAGATTTCAATTTGTTCTGGATAGCTTCCAGATTGGCGGAAA
TTTTACTGAACTCTGTGCTCAGTATGGAATTTCTACTCAGTGTGGATATAAGTGGAAAGAAAGGTTCATTAAAGAAGGAA
AAGAGGGACTTTTCGATAAAAAGAAAACTCCTAAGAATTCCCCGGCTAAAATCGCGGAAGAAACCATTCTTGAGATCATC
AAAATCAAAAATCATAGAAAGTTTTGGGGTGCTAAGAAAATCTTAGAAACTTATAAGAAGACTTTTCCAAATAGAAAAGC
TCCTAAAAGATCTACCATTGAACGTATTCTTAAGAATGTGGGACTACAAGACACTAAGAGAAAAAAAAGACCCTCTAACT
CGGGACAAAGAATCTCTATGCCTGAGAATGCGACTAGACCTAACCATGTTTAG

Upstream 100 bases:

>100_bases
GGTTAATGTATGCCTCAGGACATGGGTAACACTTTTGTAGCAAGACATAGGTAACACTTTCTGGTTTCTAGTCCCTTTAG
ATCACCTTTATAGGAGGGCT

Downstream 100 bases:

>100_bases
ACTGTCGACTTCAAAGTATGGTGGTATACTCCAGCCAGAGAGAAAGTAAATCCTCTCACCTTCAGAGATGACTTCTCCAA
ATACATTCTTTCCATCAAAA

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MGMPWKEFNIVDLRFQFVLDSFQIGGNFTELCAQYGISTQCGYKWKERFIKEGKEGLFDKKKTPKNSPAKIAEETILEII
KIKNHRKFWGAKKILETYKKTFPNRKAPKRSTIERILKNVGLQDTKRKKRPSNSGQRISMPENATRPNHV

Sequences:

>Translated_150_residues
MGMPWKEFNIVDLRFQFVLDSFQIGGNFTELCAQYGISTQCGYKWKERFIKEGKEGLFDKKKTPKNSPAKIAEETILEII
KIKNHRKFWGAKKILETYKKTFPNRKAPKRSTIERILKNVGLQDTKRKKRPSNSGQRISMPENATRPNHV
>Mature_149_residues
GMPWKEFNIVDLRFQFVLDSFQIGGNFTELCAQYGISTQCGYKWKERFIKEGKEGLFDKKKTPKNSPAKIAEETILEIIK
IKNHRKFWGAKKILETYKKTFPNRKAPKRSTIERILKNVGLQDTKRKKRPSNSGQRISMPENATRPNHV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786462, Length=123, Percent_Identity=34.1463414634146, Blast_Score=80, Evalue=5e-17,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 17518; Mature: 17386

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMPWKEFNIVDLRFQFVLDSFQIGGNFTELCAQYGISTQCGYKWKERFIKEGKEGLFDK
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
KKTPKNSPAKIAEETILEIIKIKNHRKFWGAKKILETYKKTFPNRKAPKRSTIERILKNV
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC
GLQDTKRKKRPSNSGQRISMPENATRPNHV
CCCCHHHHCCCCCCCCEECCCCCCCCCCCC
>Mature Secondary Structure 
GMPWKEFNIVDLRFQFVLDSFQIGGNFTELCAQYGISTQCGYKWKERFIKEGKEGLFDK
CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
KKTPKNSPAKIAEETILEIIKIKNHRKFWGAKKILETYKKTFPNRKAPKRSTIERILKNV
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC
GLQDTKRKKRPSNSGQRISMPENATRPNHV
CCCCHHHHCCCCCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 8113168 [H]