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The map label for this gene is ynfA [C]

Identifier: 183221637

GI number: 183221637

Start: 2332877

End: 2333224

Strand: Direct

Name: ynfA [C]

Synonym: LEPBI_I2261

Alternate gene names: 183221637

Gene position: 2332877-2333224 (Clockwise)

Preceding gene: 183221636

Following gene: 183221638

Centisome position: 64.81

GC content: 34.48

Gene sequence:

>348_bases
TTGTTAAATTCAGAATTATTCCTTATTTACCTAAAACCAACTCTCATTTTCATTTTAGCTGGACTATGCGAAATTGGTGG
CGGTTATCTAGTTTGGCTTTGGATTCGCGAAAATAAATCGATAGGTATTGGTTTATTAGGATTTATTATTTTAGGATTCT
ATGGTTTAGTAGCTACATGGCAACCTGCAAACTTTGCAAGAACATATGCAACATATGGTGGAACCTTTATAGTCATGTCA
TTGGCGTGGGCATGGAAATTTGACGATTTTATTCCAAATAAATTTGATCTAATTGGATCAGCCATTGCTTTGATCGGCGT
AATGATTATCTTTTTTGCTCCGAGATAA

Upstream 100 bases:

>100_bases
AAATTAATTCTCTTTTAAAACTGAAGGAAGATTTGATGAAAGTTGAATCAGCTTGTTCACCTAATTGCAATTTTATTGAT
AAAAAACCTTCATGCTTAAG

Downstream 100 bases:

>100_bases
AATAGGTAAACCTGGTTTACGTCGTATAACAGCGACTTACCGCTACGCTTCGGCACTTGCGGCCTCGCTCGGTCTGCGAC
ACATAGGCTTCTGGCACTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MLNSELFLIYLKPTLIFILAGLCEIGGGYLVWLWIRENKSIGIGLLGFIILGFYGLVATWQPANFARTYATYGGTFIVMS
LAWAWKFDDFIPNKFDLIGSAIALIGVMIIFFAPR

Sequences:

>Translated_115_residues
MLNSELFLIYLKPTLIFILAGLCEIGGGYLVWLWIRENKSIGIGLLGFIILGFYGLVATWQPANFARTYATYGGTFIVMS
LAWAWKFDDFIPNKFDLIGSAIALIGVMIIFFAPR
>Mature_115_residues
MLNSELFLIYLKPTLIFILAGLCEIGGGYLVWLWIRENKSIGIGLLGFIILGFYGLVATWQPANFARTYATYGGTFIVMS
LAWAWKFDDFIPNKFDLIGSAIALIGVMIIFFAPR

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family [H]

Homologues:

Organism=Escherichia coli, GI1787865, Length=100, Percent_Identity=39, Blast_Score=67, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003844 [H]

Pfam domain/function: PF02694 UPF0060 [H]

EC number: NA

Molecular weight: Translated: 12892; Mature: 12892

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNSELFLIYLKPTLIFILAGLCEIGGGYLVWLWIRENKSIGIGLLGFIILGFYGLVATW
CCCCCEEEEEEHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCC
QPANFARTYATYGGTFIVMSLAWAWKFDDFIPNKFDLIGSAIALIGVMIIFFAPR
CCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNSELFLIYLKPTLIFILAGLCEIGGGYLVWLWIRENKSIGIGLLGFIILGFYGLVATW
CCCCCEEEEEEHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCC
QPANFARTYATYGGTFIVMSLAWAWKFDDFIPNKFDLIGSAIALIGVMIIFFAPR
CCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]