| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183221601
Identifier: 183221601
GI number: 183221601
Start: 2305370
End: 2306782
Strand: Direct
Name: 183221601
Synonym: LEPBI_I2223
Alternate gene names: NA
Gene position: 2305370-2306782 (Clockwise)
Preceding gene: 183221600
Following gene: 183221602
Centisome position: 64.04
GC content: 32.7
Gene sequence:
>1413_bases ATGAAAGTTAAAGAAATTTCATTTCAAGAATTTAGGGATTTATCTCTCAGAGATGAATCTCATTTTTATGAAAAAAAGTC CAAACTGATTGCACCAAAAAAATTACAAAAATATGCAGTTTCCTTTGGAAACGCTGACGGTGGTGAATTAATAGTAGGAA TAAAAGATAATTCTGACGAACCGAATCCGGAAAAAAGATGGGATGGATTTTCTTCAATAGAAGATTTGAATGGATTATTA CAGACATTGTTTAATATTTCTCCAAGTTTAGATCTTAAATATACAATTTTAACATGTCCTTCATTTAAAGGCTATGTTAT TCAAATCAATATTGAACGAACAGCTGAGCTACATAAAACATTAGATGGCGAAGTATACCTAAGATCAGGAGCCCAATCAA TACATATAAAGGACCCTCAGAAAATTGTAGAACTCTCTTATTCAAAAGGAACAACAACATTTGAGGATCAAACACTACCT GAAATACCCCCTGAACAAATCACCGATGCGGAAGAAATTAAACTGTTTTTAAAATCTTTCTCTCCTAAAACGGATGCACT TGATTTCTGTGTAAATCAAAATTTATTTACATATAAAGAATGGTTTCCGAGAGTAGCTGCCGTATTACTGTTCCTACCTT CACCAGCTTCATTGTTACCCAAAAAATGTAGTGTAAAAATTACTCGATATAATACCAATGAAGAGAAACCAGAAAGAGAA CATTTATTAAACCAAGAAACGATTGATGCACCTTTATACAATTGCATCAAAGTCACTGCAAAGAGGATAACTGAAATAAT TTCATCAGTTACCGTAATGATTAAAAACTCTTTGGTAAAAATGGATTATCCTCAGGAAGCAATTTGGGAAATCATTGTCA ACTCCTTAGTACATAGAGATTACTCAATTTCTGATGACGTACATGTTTTAATCTATAATAACAGAATAGAAATTCTTAGT CCAGGTAAATTACCAGGTTACGTCACAACCTCGAATATTCTTGATGCTCGCTATGCAAGAAATCCAAAAATCGTAAGGAC ATTACATAGATATCCTGATCCTCCAAATAAGGATATGGGAGAGGGATTGAATACAGCATTTCAAAAAATGAAAGAAAGGG GTCTACAGCCTCCGATAATAACTGAAGTGGGAAATTACGTGAAAGTAACTTTACCCCATTTACCGATGGCAACTCCTGCT GAATCAATACTCAAATATTTAAATAATAATCCTGAAATCACTAACAAGGAAGTTAGAGAATTAACAGGGATTAAATCTGA AAATTTGGTAAAAGCAGAATTTTATAAATTGCGTAAAGCAGGGTTCCTTGAAAGAGTACCTGAAAAAAATTCAAATAAAT CTGCTTGGAAATTAACCGAAGCAGGTAGAATTGAAAGTCAAAAATATTCCTAA
Upstream 100 bases:
>100_bases TCGTGCCAATCCCTAACGTCCCCTACAGGGACTCAGGGCCAGCCTACGTCGGTTAGTCTAGTTCGTTATGCGCAATAGAA TAAATTTAAAGGAAACATAA
Downstream 100 bases:
>100_bases TTCTACTGCGCATAACAACGCCTTAACGCTTCGCTTCGGCACAAGGCCTCGCTCGGTCTGCGACACATAGGCTTCTGGCA CTCCCCTTGCTTAAGCAAGT
Product: putative ATP-binding protein
Products: NA
Alternate protein names: ATP-Dependent DNA Helicase RecG; Xin-Antitoxin System Toxin Component Fic Family; AAA-4 Family Protein; Transcriptional Regulator With HTH Domain; Truncated ATP-Dependent DNA Helicase; Transcription Regulator
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MKVKEISFQEFRDLSLRDESHFYEKKSKLIAPKKLQKYAVSFGNADGGELIVGIKDNSDEPNPEKRWDGFSSIEDLNGLL QTLFNISPSLDLKYTILTCPSFKGYVIQINIERTAELHKTLDGEVYLRSGAQSIHIKDPQKIVELSYSKGTTTFEDQTLP EIPPEQITDAEEIKLFLKSFSPKTDALDFCVNQNLFTYKEWFPRVAAVLLFLPSPASLLPKKCSVKITRYNTNEEKPERE HLLNQETIDAPLYNCIKVTAKRITEIISSVTVMIKNSLVKMDYPQEAIWEIIVNSLVHRDYSISDDVHVLIYNNRIEILS PGKLPGYVTTSNILDARYARNPKIVRTLHRYPDPPNKDMGEGLNTAFQKMKERGLQPPIITEVGNYVKVTLPHLPMATPA ESILKYLNNNPEITNKEVRELTGIKSENLVKAEFYKLRKAGFLERVPEKNSNKSAWKLTEAGRIESQKYS
Sequences:
>Translated_470_residues MKVKEISFQEFRDLSLRDESHFYEKKSKLIAPKKLQKYAVSFGNADGGELIVGIKDNSDEPNPEKRWDGFSSIEDLNGLL QTLFNISPSLDLKYTILTCPSFKGYVIQINIERTAELHKTLDGEVYLRSGAQSIHIKDPQKIVELSYSKGTTTFEDQTLP EIPPEQITDAEEIKLFLKSFSPKTDALDFCVNQNLFTYKEWFPRVAAVLLFLPSPASLLPKKCSVKITRYNTNEEKPERE HLLNQETIDAPLYNCIKVTAKRITEIISSVTVMIKNSLVKMDYPQEAIWEIIVNSLVHRDYSISDDVHVLIYNNRIEILS PGKLPGYVTTSNILDARYARNPKIVRTLHRYPDPPNKDMGEGLNTAFQKMKERGLQPPIITEVGNYVKVTLPHLPMATPA ESILKYLNNNPEITNKEVRELTGIKSENLVKAEFYKLRKAGFLERVPEKNSNKSAWKLTEAGRIESQKYS >Mature_470_residues MKVKEISFQEFRDLSLRDESHFYEKKSKLIAPKKLQKYAVSFGNADGGELIVGIKDNSDEPNPEKRWDGFSSIEDLNGLL QTLFNISPSLDLKYTILTCPSFKGYVIQINIERTAELHKTLDGEVYLRSGAQSIHIKDPQKIVELSYSKGTTTFEDQTLP EIPPEQITDAEEIKLFLKSFSPKTDALDFCVNQNLFTYKEWFPRVAAVLLFLPSPASLLPKKCSVKITRYNTNEEKPERE HLLNQETIDAPLYNCIKVTAKRITEIISSVTVMIKNSLVKMDYPQEAIWEIIVNSLVHRDYSISDDVHVLIYNNRIEILS PGKLPGYVTTSNILDARYARNPKIVRTLHRYPDPPNKDMGEGLNTAFQKMKERGLQPPIITEVGNYVKVTLPHLPMATPA ESILKYLNNNPEITNKEVRELTGIKSENLVKAEFYKLRKAGFLERVPEKNSNKSAWKLTEAGRIESQKYS
Specific function: Unknown
COG id: COG2865
COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53660; Mature: 53660
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVKEISFQEFRDLSLRDESHFYEKKSKLIAPKKLQKYAVSFGNADGGELIVGIKDNSDE CCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCC PNPEKRWDGFSSIEDLNGLLQTLFNISPSLDLKYTILTCPSFKGYVIQINIERTAELHKT CCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEEEHHHHHHHHC LDGEVYLRSGAQSIHIKDPQKIVELSYSKGTTTFEDQTLPEIPPEQITDAEEIKLFLKSF CCCCEEEECCCCEEEECCHHHHHHEECCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHC SPKTDALDFCVNQNLFTYKEWFPRVAAVLLFLPSPASLLPKKCSVKITRYNTNEEKPERE CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCCCCHHH HLLNQETIDAPLYNCIKVTAKRITEIISSVTVMIKNSLVKMDYPQEAIWEIIVNSLVHRD HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHCC YSISDDVHVLIYNNRIEILSPGKLPGYVTTSNILDARYARNPKIVRTLHRYPDPPNKDMG CCCCCCEEEEEECCEEEEECCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHH EGLNTAFQKMKERGLQPPIITEVGNYVKVTLPHLPMATPAESILKYLNNNPEITNKEVRE HHHHHHHHHHHHCCCCCCHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCHHHHHH LTGIKSENLVKAEFYKLRKAGFLERVPEKNSNKSAWKLTEAGRIESQKYS HHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCC >Mature Secondary Structure MKVKEISFQEFRDLSLRDESHFYEKKSKLIAPKKLQKYAVSFGNADGGELIVGIKDNSDE CCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCC PNPEKRWDGFSSIEDLNGLLQTLFNISPSLDLKYTILTCPSFKGYVIQINIERTAELHKT CCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEEEHHHHHHHHC LDGEVYLRSGAQSIHIKDPQKIVELSYSKGTTTFEDQTLPEIPPEQITDAEEIKLFLKSF CCCCEEEECCCCEEEECCHHHHHHEECCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHC SPKTDALDFCVNQNLFTYKEWFPRVAAVLLFLPSPASLLPKKCSVKITRYNTNEEKPERE CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCCCCHHH HLLNQETIDAPLYNCIKVTAKRITEIISSVTVMIKNSLVKMDYPQEAIWEIIVNSLVHRD HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHCC YSISDDVHVLIYNNRIEILSPGKLPGYVTTSNILDARYARNPKIVRTLHRYPDPPNKDMG CCCCCCEEEEEECCEEEEECCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHH EGLNTAFQKMKERGLQPPIITEVGNYVKVTLPHLPMATPAESILKYLNNNPEITNKEVRE HHHHHHHHHHHHCCCCCCHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCHHHHHH LTGIKSENLVKAEFYKLRKAGFLERVPEKNSNKSAWKLTEAGRIESQKYS HHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA