Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_010602 |
Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183221559
Identifier: 183221559
GI number: 183221559
Start: 2266691
End: 2267419
Strand: Direct
Name: 183221559
Synonym: LEPBI_I2180
Alternate gene names: NA
Gene position: 2266691-2267419 (Clockwise)
Preceding gene: 183221558
Following gene: 183221560
Centisome position: 62.97
GC content: 27.71
Gene sequence:
>729_bases ATGATTAAAAAAATCAGAATATTGACTATACCTATTTTACTTATATTTTCCTCGCCGCTTCTTCCAAATGATGTTGAGAG AAAAAAATATCACTTCCTAATATCCCCTTGGATTATTAATACTACTTTTGAAAAACCATCCAGAGAATTAGACAGTTCTG TTAACTTACAATTTCTATATGGATTAACTAATAATCTCTATCTTGGAGTAACTTATGGAATTGGTAAAAATGGGGATAAA AGTCTAGAGTCTTTTCCATCTAGTTCTTATTTTACCAGTAGAATTTATCAATTTTCTACTTCGAAAAATTCTGAAACTTT TACATTAAATCTTCAATATTTTATTTGGAAATTTGTGTATACAAGTTTCAATATTGGAATCGAAAAAGGCTTTTCTGTCG AAAGAAATAATTTAGCAATTATTCGAGCTAATAATATAACTCCACAACCATTTTCAATGAAAACTATTTTTGACGATAGA ACCTTCAGTTCAATTGGAATTGGATTTAGGCATGAATTAAGTTCTTCCATTTTAATTGCATTCGAATATCAACGTGGCTA TATTGAAGCTGGAAAAGTTAATCAACATTTTACTTACAATCCTGATTACTATGTTAATAACTTACCTTATATGCTAGAAA ATTTTTACTTAAATAACATTCTTAATGATACATCTTTGAAAAATTCGTTATATCAACAATTTTATCTTTCAGCGGGTTTT GCACTTTGA
Upstream 100 bases:
>100_bases ATCCGCAAACTACGTGCCAGTCCCTAACGTCCCTTCGGGACTCAGGGCCAGGGAACTTCGGTAAGTCTAGTTCGTTATAC GCAATAATTTCAAAAAAAAA
Downstream 100 bases:
>100_bases TACTATTAATGAAATTACTGCGTATAACAGCGACTTACCGCTACGCTTCGGCACGAGGCCTCGCTCGGCCTACGGCAAAT TGTCCTCCTGTCACTCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MIKKIRILTIPILLIFSSPLLPNDVERKKYHFLISPWIINTTFEKPSRELDSSVNLQFLYGLTNNLYLGVTYGIGKNGDK SLESFPSSSYFTSRIYQFSTSKNSETFTLNLQYFIWKFVYTSFNIGIEKGFSVERNNLAIIRANNITPQPFSMKTIFDDR TFSSIGIGFRHELSSSILIAFEYQRGYIEAGKVNQHFTYNPDYYVNNLPYMLENFYLNNILNDTSLKNSLYQQFYLSAGF AL
Sequences:
>Translated_242_residues MIKKIRILTIPILLIFSSPLLPNDVERKKYHFLISPWIINTTFEKPSRELDSSVNLQFLYGLTNNLYLGVTYGIGKNGDK SLESFPSSSYFTSRIYQFSTSKNSETFTLNLQYFIWKFVYTSFNIGIEKGFSVERNNLAIIRANNITPQPFSMKTIFDDR TFSSIGIGFRHELSSSILIAFEYQRGYIEAGKVNQHFTYNPDYYVNNLPYMLENFYLNNILNDTSLKNSLYQQFYLSAGF AL >Mature_242_residues MIKKIRILTIPILLIFSSPLLPNDVERKKYHFLISPWIINTTFEKPSRELDSSVNLQFLYGLTNNLYLGVTYGIGKNGDK SLESFPSSSYFTSRIYQFSTSKNSETFTLNLQYFIWKFVYTSFNIGIEKGFSVERNNLAIIRANNITPQPFSMKTIFDDR TFSSIGIGFRHELSSSILIAFEYQRGYIEAGKVNQHFTYNPDYYVNNLPYMLENFYLNNILNDTSLKNSLYQQFYLSAGF AL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28108; Mature: 28108
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKIRILTIPILLIFSSPLLPNDVERKKYHFLISPWIINTTFEKPSRELDSSVNLQFLY CCCEEEEHEEHEEEHHCCCCCCCCCCCCEEEEEEECEEEEECCCCCHHHCCCCCCEEEEE GLTNNLYLGVTYGIGKNGDKSLESFPSSSYFTSRIYQFSTSKNSETFTLNLQYFIWKFVY ECCCCEEEEEEECCCCCCCHHHHHCCCCCHHHHEEEEEECCCCCEEEEEEHHHHHHHHHH TSFNIGIEKGFSVERNNLAIIRANNITPQPFSMKTIFDDRTFSSIGIGFRHELSSSILIA HHEECCCCCCCEEECCCEEEEEECCCCCCCCEEEEEECCCCCHHHCCCHHHCCCCEEEEE FEYQRGYIEAGKVNQHFTYNPDYYVNNLPYMLENFYLNNILNDTSLKNSLYQQFYLSAGF EEECCCEEECCCCCCCEEECCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC AL CC >Mature Secondary Structure MIKKIRILTIPILLIFSSPLLPNDVERKKYHFLISPWIINTTFEKPSRELDSSVNLQFLY CCCEEEEHEEHEEEHHCCCCCCCCCCCCEEEEEEECEEEEECCCCCHHHCCCCCCEEEEE GLTNNLYLGVTYGIGKNGDKSLESFPSSSYFTSRIYQFSTSKNSETFTLNLQYFIWKFVY ECCCCEEEEEEECCCCCCCHHHHHCCCCCHHHHEEEEEECCCCCEEEEEEHHHHHHHHHH TSFNIGIEKGFSVERNNLAIIRANNITPQPFSMKTIFDDRTFSSIGIGFRHELSSSILIA HHEECCCCCCCEEECCCEEEEEECCCCCCCCEEEEEECCCCCHHHCCCHHHCCCCEEEEE FEYQRGYIEAGKVNQHFTYNPDYYVNNLPYMLENFYLNNILNDTSLKNSLYQQFYLSAGF EEECCCEEECCCCCCCEEECCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC AL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA