| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221483
Identifier: 183221483
GI number: 183221483
Start: 2194678
End: 2195460
Strand: Direct
Name: 183221483
Synonym: LEPBI_I2101
Alternate gene names: NA
Gene position: 2194678-2195460 (Clockwise)
Preceding gene: 183221468
Following gene: 183221487
Centisome position: 60.97
GC content: 38.44
Gene sequence:
>783_bases ATGGAATTTCTTCTTGGTGTAGACAAACCTTTCTATTTCTATGGAATTTCTAACATTTTTATGGGTGAAAAATCAAATTT TCCAGAAGTTTGGGGCCTAGGCCTTGGTCTCTTTTTAGCGCTTTTTGCTGGTTTTTTAAACCACATCACTCCGAAAGAAC CGGCTCTTGACAACCACTCTGGATTTGAATCCACTCTCCTCGGCCTGGAAATGGCAGAAACTCCGAAACAAGTCCAAGAC CTCATAGGCATCCCAGATACCATTGAATTTTTCCACCTGTCCACAGAATACAGGCAAGTCCATTACCTCGACTTTGGTTT TATTTTTTGTTACCTTGCGTTTTTAACGTATACCGGGCATTATGCGGGACGAAAGGTTCGCCCCATTTTTTTAAAAATCT TTATGGGTATGATTTTACTTCTTGTGATTGCTGGTTTTGCGGACCTAATCGAAAACATTCTCATTCTCAACATTTTAGAT GCAAAAACGGTAGAGGAAATGACTCCCTCTTTGGAATACCTAAAACCTACATCCCAACTCAAGTGGTTTTGTTTGTTTTC TTATGTAGCAATCGTTTCCATCTACTTTTGGTTATACGAAAAAGGTTGGATCCTCAGAAGTGCTGCCCTTTTATTCTTTA CTGGATTTTTTTTACAGATCTTTTCCATCATCCGAACAAACTTACTGGAACTCAGTTTTCCCTTTTTTGCTTTGGGACTC GTTTGTACCTGGTTCCATTATGGTTTTAGTTTGGCTTTTAGTTCCTTTTCAAAAAAAACATAA
Upstream 100 bases:
>100_bases TTTCTCATATTTCTCCTATGGGTATACCTACATAGAAACACTTGTAGGTAGAAGAATTTGTTAGTTTCCACTAGGGTTTT GCCAAGGGGGGCTTGGGTCA
Downstream 100 bases:
>100_bases CCCCTTCCGCCAGAGATTACCAAATCGGTTCCCAATTGTTTGCAGAGGATCGCATACTCTTTTAAAAAATTTTCGGCTTC TTTTGGACCCAGTGGAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MEFLLGVDKPFYFYGISNIFMGEKSNFPEVWGLGLGLFLALFAGFLNHITPKEPALDNHSGFESTLLGLEMAETPKQVQD LIGIPDTIEFFHLSTEYRQVHYLDFGFIFCYLAFLTYTGHYAGRKVRPIFLKIFMGMILLLVIAGFADLIENILILNILD AKTVEEMTPSLEYLKPTSQLKWFCLFSYVAIVSIYFWLYEKGWILRSAALLFFTGFFLQIFSIIRTNLLELSFPFFALGL VCTWFHYGFSLAFSSFSKKT
Sequences:
>Translated_260_residues MEFLLGVDKPFYFYGISNIFMGEKSNFPEVWGLGLGLFLALFAGFLNHITPKEPALDNHSGFESTLLGLEMAETPKQVQD LIGIPDTIEFFHLSTEYRQVHYLDFGFIFCYLAFLTYTGHYAGRKVRPIFLKIFMGMILLLVIAGFADLIENILILNILD AKTVEEMTPSLEYLKPTSQLKWFCLFSYVAIVSIYFWLYEKGWILRSAALLFFTGFFLQIFSIIRTNLLELSFPFFALGL VCTWFHYGFSLAFSSFSKKT >Mature_260_residues MEFLLGVDKPFYFYGISNIFMGEKSNFPEVWGLGLGLFLALFAGFLNHITPKEPALDNHSGFESTLLGLEMAETPKQVQD LIGIPDTIEFFHLSTEYRQVHYLDFGFIFCYLAFLTYTGHYAGRKVRPIFLKIFMGMILLLVIAGFADLIENILILNILD AKTVEEMTPSLEYLKPTSQLKWFCLFSYVAIVSIYFWLYEKGWILRSAALLFFTGFFLQIFSIIRTNLLELSFPFFALGL VCTWFHYGFSLAFSSFSKKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29938; Mature: 29938
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFLLGVDKPFYFYGISNIFMGEKSNFPEVWGLGLGLFLALFAGFLNHITPKEPALDNHS CCCCCCCCCCEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GFESTLLGLEMAETPKQVQDLIGIPDTIEFFHLSTEYRQVHYLDFGFIFCYLAFLTYTGH CHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC YAGRKVRPIFLKIFMGMILLLVIAGFADLIENILILNILDAKTVEEMTPSLEYLKPTSQL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHH KWFCLFSYVAIVSIYFWLYEKGWILRSAALLFFTGFFLQIFSIIRTNLLELSFPFFALGL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VCTWFHYGFSLAFSSFSKKT HHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEFLLGVDKPFYFYGISNIFMGEKSNFPEVWGLGLGLFLALFAGFLNHITPKEPALDNHS CCCCCCCCCCEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GFESTLLGLEMAETPKQVQDLIGIPDTIEFFHLSTEYRQVHYLDFGFIFCYLAFLTYTGH CHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC YAGRKVRPIFLKIFMGMILLLVIAGFADLIENILILNILDAKTVEEMTPSLEYLKPTSQL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHH KWFCLFSYVAIVSIYFWLYEKGWILRSAALLFFTGFFLQIFSIIRTNLLELSFPFFALGL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VCTWFHYGFSLAFSSFSKKT HHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA