| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221433
Identifier: 183221433
GI number: 183221433
Start: 2135469
End: 2136878
Strand: Direct
Name: 183221433
Synonym: LEPBI_I2051
Alternate gene names: NA
Gene position: 2135469-2136878 (Clockwise)
Preceding gene: 183221432
Following gene: 183221434
Centisome position: 59.32
GC content: 44.18
Gene sequence:
>1410_bases ATGACACATATCAAATATTGGCCGATTCCACTGATTTTATGTGTCCCTATTCTCTATTCATGCCAAAACTCTGACTTATC CAACGTCTGTGATCCCAAATCCGATTTATACATAGAGAGTTTCCTGTTACGATTTGTTAATTTTGACGAAACACCACACT GTGGTGTTGTCCTAAGAGTTGACCCACCCACTTACCTAATCTGTCCAGCACTTGACCCAAAACTGAATGGGAGTTTTTTT GTGGAATCTTTTGTAACGGATGGTAACCGTCTGAGTTTTTCTAGTAACCCACCTCTCCCTTCTGGAGTGAATTTTTCTTT TTTCGGGGCTTCTTTAGAAGGAACATATACTGGTTGGAAGGCAAATCCAACCGAGTACACCATCACAGCGAGTAATCCGA AAGGAAGTGCTAGTTGTAGCTACAAACCAGCTTGGATGGGAAAACCTCCACTCAAAACCAATATCACAACTTGTTATGAC GCAGCAGGAAACCAAGATCCAACTTGCACTTCTGTTCCAGGCCAAGATGGACAGTTACAAAAAGGAACAAATACAAGTTA TGTGGGCCCATCACTTGTTTCCGGAGTTGAAATCACATCGGATATAGCGACTGGACTCGTTTGGACAAGTTGCATCCGAG GTAGGACTGGCATCGGTTGCTCGACAGTGGGATCCATCACTTTTACGTATGCTGCTGCGCAGACCGAATGTACAAGCTTA AACTCTGGTTCGGGATTTGCAGACCGAACGGATTGGCGTGTTCCGGAAATTGAGGAATACATTAGCACCTTCGATCATTC AACAGAAAGCCCTTCAATCAATGCAACGTATTTTCCACAAACAGAAAGTTTCAATTATAAATCAAACACATCGAATGCGG CAAGTACGGGAGCTTTTTATCCAACCTTCATCCAATCTTCGATAGGATTTGGGAACTATACTGACGGCCACCATCTGCGA TGTGTTGCCACTCCCAAACATCCATTTACCAAACGTTTGGTGGACCAATTGGACGGTACCATTTTGGATTTGGACACATC CCTTGTTTGGCAAAAATGTACAGCGGGGCAACCGAATGTTCCCACTTGTACAGGCGGAACGGATGTTCTCAGTACATGGA CAACAGCAATCAATTATTGCCAAACATTGACGCTTTCTGGCAAATCTTGGCGACTACCGAATGCGAATGAATTAAAAAGT ATCATCGACTACCGTACGAATTTTGGAACTCCAGGATTTAATTCTGTTTTTTTTTCGAACACGGCATCTTCCGCTTTTTG GTCGTCAAGCCCTGTCCTTGGCACCCCTTCCACCTTAGCATATGCCGTAGATTTTGGAAGCTCGGGAGGAGGACCTGCCT TAAAAACTAGCAACGCAGTCCGCACTCGCTGTGTCACAGACTATCGTTAA
Upstream 100 bases:
>100_bases GAACAACTCAAATCACAAATCGAAACTTTCCGACAGAAAATTGTTGATGAAATTCCGTCATAAGTAGTTTCATAGAAATC GACCGTTTAGCATCGATTTT
Downstream 100 bases:
>100_bases AACATGACCCAACCATTGTTCTCAAAGTTTTGGATACGAATTTCTCTCTTCACTTCGGTTCTCTTACCATTCTCTTGCAC AACAATTGGTTTCCACCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MTHIKYWPIPLILCVPILYSCQNSDLSNVCDPKSDLYIESFLLRFVNFDETPHCGVVLRVDPPTYLICPALDPKLNGSFF VESFVTDGNRLSFSSNPPLPSGVNFSFFGASLEGTYTGWKANPTEYTITASNPKGSASCSYKPAWMGKPPLKTNITTCYD AAGNQDPTCTSVPGQDGQLQKGTNTSYVGPSLVSGVEITSDIATGLVWTSCIRGRTGIGCSTVGSITFTYAAAQTECTSL NSGSGFADRTDWRVPEIEEYISTFDHSTESPSINATYFPQTESFNYKSNTSNAASTGAFYPTFIQSSIGFGNYTDGHHLR CVATPKHPFTKRLVDQLDGTILDLDTSLVWQKCTAGQPNVPTCTGGTDVLSTWTTAINYCQTLTLSGKSWRLPNANELKS IIDYRTNFGTPGFNSVFFSNTASSAFWSSSPVLGTPSTLAYAVDFGSSGGGPALKTSNAVRTRCVTDYR
Sequences:
>Translated_469_residues MTHIKYWPIPLILCVPILYSCQNSDLSNVCDPKSDLYIESFLLRFVNFDETPHCGVVLRVDPPTYLICPALDPKLNGSFF VESFVTDGNRLSFSSNPPLPSGVNFSFFGASLEGTYTGWKANPTEYTITASNPKGSASCSYKPAWMGKPPLKTNITTCYD AAGNQDPTCTSVPGQDGQLQKGTNTSYVGPSLVSGVEITSDIATGLVWTSCIRGRTGIGCSTVGSITFTYAAAQTECTSL NSGSGFADRTDWRVPEIEEYISTFDHSTESPSINATYFPQTESFNYKSNTSNAASTGAFYPTFIQSSIGFGNYTDGHHLR CVATPKHPFTKRLVDQLDGTILDLDTSLVWQKCTAGQPNVPTCTGGTDVLSTWTTAINYCQTLTLSGKSWRLPNANELKS IIDYRTNFGTPGFNSVFFSNTASSAFWSSSPVLGTPSTLAYAVDFGSSGGGPALKTSNAVRTRCVTDYR >Mature_468_residues THIKYWPIPLILCVPILYSCQNSDLSNVCDPKSDLYIESFLLRFVNFDETPHCGVVLRVDPPTYLICPALDPKLNGSFFV ESFVTDGNRLSFSSNPPLPSGVNFSFFGASLEGTYTGWKANPTEYTITASNPKGSASCSYKPAWMGKPPLKTNITTCYDA AGNQDPTCTSVPGQDGQLQKGTNTSYVGPSLVSGVEITSDIATGLVWTSCIRGRTGIGCSTVGSITFTYAAAQTECTSLN SGSGFADRTDWRVPEIEEYISTFDHSTESPSINATYFPQTESFNYKSNTSNAASTGAFYPTFIQSSIGFGNYTDGHHLRC VATPKHPFTKRLVDQLDGTILDLDTSLVWQKCTAGQPNVPTCTGGTDVLSTWTTAINYCQTLTLSGKSWRLPNANELKSI IDYRTNFGTPGFNSVFFSNTASSAFWSSSPVLGTPSTLAYAVDFGSSGGGPALKTSNAVRTRCVTDYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50633; Mature: 50501
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHIKYWPIPLILCVPILYSCQNSDLSNVCDPKSDLYIESFLLRFVNFDETPHCGVVLRV CCCCEECCHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEE DPPTYLICPALDPKLNGSFFVESFVTDGNRLSFSSNPPLPSGVNFSFFGASLEGTYTGWK CCCCEEEECCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCC ANPTEYTITASNPKGSASCSYKPAWMGKPPLKTNITTCYDAAGNQDPTCTSVPGQDGQLQ CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEE KGTNTSYVGPSLVSGVEITSDIATGLVWTSCIRGRTGIGCSTVGSITFTYAAAQTECTSL CCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHCCC NSGSGFADRTDWRVPEIEEYISTFDHSTESPSINATYFPQTESFNYKSNTSNAASTGAFY CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC PTFIQSSIGFGNYTDGHHLRCVATPKHPFTKRLVDQLDGTILDLDTSLVWQKCTAGQPNV HHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCEEEEECHHHHHHHHCCCCCCC PTCTGGTDVLSTWTTAINYCQTLTLSGKSWRLPNANELKSIIDYRTNFGTPGFNSVFFSN CCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECC TASSAFWSSSPVLGTPSTLAYAVDFGSSGGGPALKTSNAVRTRCVTDYR CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEECCCCHHHEEECCCC >Mature Secondary Structure THIKYWPIPLILCVPILYSCQNSDLSNVCDPKSDLYIESFLLRFVNFDETPHCGVVLRV CCCEECCHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEE DPPTYLICPALDPKLNGSFFVESFVTDGNRLSFSSNPPLPSGVNFSFFGASLEGTYTGWK CCCCEEEECCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCC ANPTEYTITASNPKGSASCSYKPAWMGKPPLKTNITTCYDAAGNQDPTCTSVPGQDGQLQ CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEE KGTNTSYVGPSLVSGVEITSDIATGLVWTSCIRGRTGIGCSTVGSITFTYAAAQTECTSL CCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHCCC NSGSGFADRTDWRVPEIEEYISTFDHSTESPSINATYFPQTESFNYKSNTSNAASTGAFY CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC PTFIQSSIGFGNYTDGHHLRCVATPKHPFTKRLVDQLDGTILDLDTSLVWQKCTAGQPNV HHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCEEEEECHHHHHHHHCCCCCCC PTCTGGTDVLSTWTTAINYCQTLTLSGKSWRLPNANELKSIIDYRTNFGTPGFNSVFFSN CCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECC TASSAFWSSSPVLGTPSTLAYAVDFGSSGGGPALKTSNAVRTRCVTDYR CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEECCCCHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA