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The map label for this gene is ydhD [C]

Identifier: 183221293

GI number: 183221293

Start: 2000417

End: 2000725

Strand: Direct

Name: ydhD [C]

Synonym: LEPBI_I1910

Alternate gene names: 183221293

Gene position: 2000417-2000725 (Clockwise)

Preceding gene: 183221292

Following gene: 183221294

Centisome position: 55.57

GC content: 38.83

Gene sequence:

>309_bases
ATGGAACAAGAGTTAAAAGATAAAATTGAATCGTTAATCAAATCAGAGAAGGTATTTCTTTTTATGAAAGGAACACCGGA
AATGCCTCAGTGCGGATTTTCTGCTGGAGTGGTTTCCACTCTCAAACAACAAGGAATTTCATTTGGTTCCTTCAATGTAT
TGTCCGATATGAACATACGCGAAGGCATCAAAGAGTATACGAACTGGCCTACCATCCCACAACTTTATATCAACGGAGAA
TTTGTGGGGGGTCATGACATCACCGTGCAAATGGCACAATCTGGTGAACTTAAGAAAAAAATAGGATAA

Upstream 100 bases:

>100_bases
AGGGTCTCATTGAACAACACCGAATGGTGTATGCAACTTTAAAAGAAGAATTAAAAGAAGAAATCCATGCTTTGGCATTG
GAAACAAGGAGTGAATGATC

Downstream 100 bases:

>100_bases
TCCAATGATTCGTCTCTACCAATATGATTCTTGTCCTTATTGTTACCGTGTTCGGCAATCCATTTCGGCACTTGGTCTTG
TGGAAGGAAAGGATTATGAA

Product: putative glutaredoxin-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MEQELKDKIESLIKSEKVFLFMKGTPEMPQCGFSAGVVSTLKQQGISFGSFNVLSDMNIREGIKEYTNWPTIPQLYINGE
FVGGHDITVQMAQSGELKKKIG

Sequences:

>Translated_102_residues
MEQELKDKIESLIKSEKVFLFMKGTPEMPQCGFSAGVVSTLKQQGISFGSFNVLSDMNIREGIKEYTNWPTIPQLYINGE
FVGGHDITVQMAQSGELKKKIG
>Mature_102_residues
MEQELKDKIESLIKSEKVFLFMKGTPEMPQCGFSAGVVSTLKQQGISFGSFNVLSDMNIREGIKEYTNWPTIPQLYINGE
FVGGHDITVQMAQSGELKKKIG

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=92, Percent_Identity=55.4347826086957, Blast_Score=123, Evalue=3e-29,
Organism=Homo sapiens, GI95113651, Length=97, Percent_Identity=43.298969072165, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1787943, Length=95, Percent_Identity=44.2105263157895, Blast_Score=100, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71988159, Length=87, Percent_Identity=48.2758620689655, Blast_Score=104, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI71988153, Length=87, Percent_Identity=48.2758620689655, Blast_Score=104, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17556042, Length=94, Percent_Identity=45.7446808510638, Blast_Score=103, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6325198, Length=100, Percent_Identity=53, Blast_Score=119, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6321022, Length=80, Percent_Identity=50, Blast_Score=99, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6320303, Length=84, Percent_Identity=45.2380952380952, Blast_Score=95, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24642023, Length=92, Percent_Identity=50, Blast_Score=116, Evalue=2e-27,
Organism=Drosophila melanogaster, GI19921242, Length=99, Percent_Identity=34.3434343434343, Blast_Score=90, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 11374; Mature: 11374

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQELKDKIESLIKSEKVFLFMKGTPEMPQCGFSAGVVSTLKQQGISFGSFNVLSDMNIR
CCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHCCCCHH
EGIKEYTNWPTIPQLYINGEFVGGHDITVQMAQSGELKKKIG
HHHHHHCCCCCCCEEEECCEEECCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MEQELKDKIESLIKSEKVFLFMKGTPEMPQCGFSAGVVSTLKQQGISFGSFNVLSDMNIR
CCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHCCCCHH
EGIKEYTNWPTIPQLYINGEFVGGHDITVQMAQSGELKKKIG
HHHHHHCCCCCCCEEEECCEEECCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]