| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221278
Identifier: 183221278
GI number: 183221278
Start: 1987505
End: 1988782
Strand: Direct
Name: 183221278
Synonym: LEPBI_I1895
Alternate gene names: NA
Gene position: 1987505-1988782 (Clockwise)
Preceding gene: 183221276
Following gene: 183221279
Centisome position: 55.21
GC content: 41.86
Gene sequence:
>1278_bases TTGGCTTTGGTGATTTCCACTGCTCGAAGGGGACGTATCACCAATCCCCCCAATCCTTCATATAGAAACTCCAAATACTT CTATTCACCCTTCCTACCTAAGTTCACTAGAACTACTTATACAAAACCTACTAAGAACCTCTCTCCCATAGACAATGAAC AAATCAAAAGAGAATACACTCTTAGAACTCTCTCAATACTAAACACCATCTATCCCAAAAGATGCAACTGCCCTAAGTCC CTAGAGAACCCTTCCCTCAATTTCTTAAGACTAAAAGGGAAAGAATCCATAGCCAGATGTTCTCACTGCCACAAACAAAT CAGCATCACTGCAAACACACCCTTCCAAAACATAAAACTACCCTTCGCCTATATCTCTTACACCATCCAAGACCAGATCT TACAATACCCAAAGACCATGACCTCCAAAGAGATCGCAAGAAAACTAGGTCTTCCATACAAAACAGCTTATTATCTTAAG AAACGTATCCAGGTATTCTTCTCACATCTCAATGAGTCACTCAGGGAACAGTTATACAAAGAACTAGAAGAGAACTCTAA AAACTTCAGACTACCAAAGGAAGGTGACCTCAAGGAAACCCTTAAAAATCAGCCTGTTGCAGTAGCCGACTCAGTGGTGT TATATTCCTCATCCTTAAGAGCAAACAAACATAGATCGAGAAGGTTCAAGGGAGGAACTGCATCCATCTATGCTTCTAAT TCCATAGGAGGACACCAAATCGGAACCCTTGTTCATACGATTGGCATTAACGGCGGTATGACTTTCTACAAATCGATTCC TTTGAATAACCAACACTACTTAGAAAAAGACTTAGAAGAAACCATCCCTAAGAATGTAACCCTTTTTACAGATGAAGGAT ATGGATTCCTATGGGACAGACCTAACCATAAGTCAGTGAATCACTCGAAGAAATCAAATGATCCAAGATACAATATGAGC CGAGAGAGATGGGTCACTAAAGAGGGTGTGTCTTCCAATGGAGCGGAAGCGAGGAATAATATTTTGAAGCAGTCATTCAG GTCGTATGGCTACATCTCTCCAAAGTGGAGTCAACTGGCATTGAATGAGTTAAGTTTTCTAGGGAACGTAAGATTTGTCC CTGAGTTGAGGGAATTATTGACTTTGGGGGAATCTAAAACTGTTGGCTTTGGTGATTTCCACTGCTCGAAGGGGGACTCG AACCCCCACACCTTGCGGCACTACCACCTCAAAGTAGCGTGTCTACCAATTCCACCATCCGAGCAGGTGTATATGTAG
Upstream 100 bases:
>100_bases AAGTGGAGCCAACTGGCATTAAGTGAGTTAAGTTTTCTAGGGAACGTAAGATTTGTCCCTGAGTTGAGGGAATTATTGAC TTTGGGGGAATCTAAAACTG
Downstream 100 bases:
>100_bases GACAGGTTAGGAAAACGGGTTCTTTCGTCAAGGAGATGAATTTTCTCTTGTCACTTGCCCTTGGTATTCAGTAGGTTGTA GGGGTCATCCGTATGCAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MALVISTARRGRITNPPNPSYRNSKYFYSPFLPKFTRTTYTKPTKNLSPIDNEQIKREYTLRTLSILNTIYPKRCNCPKS LENPSLNFLRLKGKESIARCSHCHKQISITANTPFQNIKLPFAYISYTIQDQILQYPKTMTSKEIARKLGLPYKTAYYLK KRIQVFFSHLNESLREQLYKELEENSKNFRLPKEGDLKETLKNQPVAVADSVVLYSSSLRANKHRSRRFKGGTASIYASN SIGGHQIGTLVHTIGINGGMTFYKSIPLNNQHYLEKDLEETIPKNVTLFTDEGYGFLWDRPNHKSVNHSKKSNDPRYNMS RERWVTKEGVSSNGAEARNNILKQSFRSYGYISPKWSQLALNELSFLGNVRFVPELRELLTLGESKTVGFGDFHCSKGDS NPHTLRHYHLKVACLPIPPSEQVYM
Sequences:
>Translated_425_residues MALVISTARRGRITNPPNPSYRNSKYFYSPFLPKFTRTTYTKPTKNLSPIDNEQIKREYTLRTLSILNTIYPKRCNCPKS LENPSLNFLRLKGKESIARCSHCHKQISITANTPFQNIKLPFAYISYTIQDQILQYPKTMTSKEIARKLGLPYKTAYYLK KRIQVFFSHLNESLREQLYKELEENSKNFRLPKEGDLKETLKNQPVAVADSVVLYSSSLRANKHRSRRFKGGTASIYASN SIGGHQIGTLVHTIGINGGMTFYKSIPLNNQHYLEKDLEETIPKNVTLFTDEGYGFLWDRPNHKSVNHSKKSNDPRYNMS RERWVTKEGVSSNGAEARNNILKQSFRSYGYISPKWSQLALNELSFLGNVRFVPELRELLTLGESKTVGFGDFHCSKGDS NPHTLRHYHLKVACLPIPPSEQVYM >Mature_424_residues ALVISTARRGRITNPPNPSYRNSKYFYSPFLPKFTRTTYTKPTKNLSPIDNEQIKREYTLRTLSILNTIYPKRCNCPKSL ENPSLNFLRLKGKESIARCSHCHKQISITANTPFQNIKLPFAYISYTIQDQILQYPKTMTSKEIARKLGLPYKTAYYLKK RIQVFFSHLNESLREQLYKELEENSKNFRLPKEGDLKETLKNQPVAVADSVVLYSSSLRANKHRSRRFKGGTASIYASNS IGGHQIGTLVHTIGINGGMTFYKSIPLNNQHYLEKDLEETIPKNVTLFTDEGYGFLWDRPNHKSVNHSKKSNDPRYNMSR ERWVTKEGVSSNGAEARNNILKQSFRSYGYISPKWSQLALNELSFLGNVRFVPELRELLTLGESKTVGFGDFHCSKGDSN PHTLRHYHLKVACLPIPPSEQVYM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48848; Mature: 48717
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALVISTARRGRITNPPNPSYRNSKYFYSPFLPKFTRTTYTKPTKNLSPIDNEQIKREYT CEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHH LRTLSILNTIYPKRCNCPKSLENPSLNFLRLKGKESIARCSHCHKQISITANTPFQNIKL HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHEEEEEECCCCCCCCC PFAYISYTIQDQILQYPKTMTSKEIARKLGLPYKTAYYLKKRIQVFFSHLNESLREQLYK CHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELEENSKNFRLPKEGDLKETLKNQPVAVADSVVLYSSSLRANKHRSRRFKGGTASIYASN HHHCCCCCCCCCCCCCHHHHHCCCCEEEHHHEEEECCHHHHHHHHHHHCCCCCEEEEECC SIGGHQIGTLVHTIGINGGMTFYKSIPLNNQHYLEKDLEETIPKNVTLFTDEGYGFLWDR CCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCEEECCC PNHKSVNHSKKSNDPRYNMSRERWVTKEGVSSNGAEARNNILKQSFRSYGYISPKWSQLA CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH LNELSFLGNVRFVPELRELLTLGESKTVGFGDFHCSKGDSNPHTLRHYHLKVACLPIPPS HHHHHHHCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCC EQVYM CCCCC >Mature Secondary Structure ALVISTARRGRITNPPNPSYRNSKYFYSPFLPKFTRTTYTKPTKNLSPIDNEQIKREYT EEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHH LRTLSILNTIYPKRCNCPKSLENPSLNFLRLKGKESIARCSHCHKQISITANTPFQNIKL HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHEEEEEECCCCCCCCC PFAYISYTIQDQILQYPKTMTSKEIARKLGLPYKTAYYLKKRIQVFFSHLNESLREQLYK CHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELEENSKNFRLPKEGDLKETLKNQPVAVADSVVLYSSSLRANKHRSRRFKGGTASIYASN HHHCCCCCCCCCCCCCHHHHHCCCCEEEHHHEEEECCHHHHHHHHHHHCCCCCEEEEECC SIGGHQIGTLVHTIGINGGMTFYKSIPLNNQHYLEKDLEETIPKNVTLFTDEGYGFLWDR CCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCEEECCC PNHKSVNHSKKSNDPRYNMSRERWVTKEGVSSNGAEARNNILKQSFRSYGYISPKWSQLA CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH LNELSFLGNVRFVPELRELLTLGESKTVGFGDFHCSKGDSNPHTLRHYHLKVACLPIPPS HHHHHHHCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCC EQVYM CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA