| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183221274
Identifier: 183221274
GI number: 183221274
Start: 1983876
End: 1984313
Strand: Reverse
Name: 183221274
Synonym: LEPBI_I1891
Alternate gene names: NA
Gene position: 1984313-1983876 (Counterclockwise)
Preceding gene: 183221277
Following gene: 183221271
Centisome position: 55.12
GC content: 36.53
Gene sequence:
>438_bases ATGGAAGCTGCATTAGGCGTGTTTTTTATTTGTTGTATGAGTGTCTTAAGTCCCTTTTCTGGAGTGGATGATGGTGAATT ACGAGGTTGTCCTCCTTCACCTAACTGTGTTTCTAGCCAAAGTATGAAATACAATTTCATACATAAAGTGGATCCCATTT CCTATTCTACCTCAAGAGAAATTGCTTTTAAACGAATTTCAGACTACTTCCACCATTCGGAAAATATTTATATTAGCGAA GAAAAAGAAGGGGAATACATTCGAATTATTTTCTTTACAAAGGTCTTTCGTTTTCCTGATCGTGTGGAAATTTATTTCCC AACTGACAAAAATGAAGCGCAAGTGCGATCCCAGTCTATCATAGGTCTTTGGGATATCTTTGCGAACCGAAGGCGAGTGA ATGCATTTCGAGAAATTTTAACAAAAGAAGATTCATAA
Upstream 100 bases:
>100_bases TGGTAGAAGTGAGTTTGAGGATCCGTTTCATGAGATAAGGAAATTACAAAGAAAATGAAAATCTGCAAGTAAAAAAAGAG GTAATTTCTTTCATGGAGAT
Downstream 100 bases:
>100_bases AATTTCATTATGGATTAAAAAGTGAACACCTCCAATGATTCGTTCCATTTTGGAACCAAATAACCAGTCGCCTAACACCA TGATGCCAGTTTCTTTACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MEAALGVFFICCMSVLSPFSGVDDGELRGCPPSPNCVSSQSMKYNFIHKVDPISYSTSREIAFKRISDYFHHSENIYISE EKEGEYIRIIFFTKVFRFPDRVEIYFPTDKNEAQVRSQSIIGLWDIFANRRRVNAFREILTKEDS
Sequences:
>Translated_145_residues MEAALGVFFICCMSVLSPFSGVDDGELRGCPPSPNCVSSQSMKYNFIHKVDPISYSTSREIAFKRISDYFHHSENIYISE EKEGEYIRIIFFTKVFRFPDRVEIYFPTDKNEAQVRSQSIIGLWDIFANRRRVNAFREILTKEDS >Mature_145_residues MEAALGVFFICCMSVLSPFSGVDDGELRGCPPSPNCVSSQSMKYNFIHKVDPISYSTSREIAFKRISDYFHHSENIYISE EKEGEYIRIIFFTKVFRFPDRVEIYFPTDKNEAQVRSQSIIGLWDIFANRRRVNAFREILTKEDS
Specific function: Unknown
COG id: COG4446
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16870; Mature: 16870
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAALGVFFICCMSVLSPFSGVDDGELRGCPPSPNCVSSQSMKYNFIHKVDPISYSTSRE CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHH IAFKRISDYFHHSENIYISEEKEGEYIRIIFFTKVFRFPDRVEIYFPTDKNEAQVRSQSI HHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEHHHHCCCCCEEEEECCCCCHHHHHHHHH IGLWDIFANRRRVNAFREILTKEDS HHHHHHHHCCHHHHHHHHHHHCCCC >Mature Secondary Structure MEAALGVFFICCMSVLSPFSGVDDGELRGCPPSPNCVSSQSMKYNFIHKVDPISYSTSRE CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHH IAFKRISDYFHHSENIYISEEKEGEYIRIIFFTKVFRFPDRVEIYFPTDKNEAQVRSQSI HHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEHHHHCCCCCEEEEECCCCCHHHHHHHHH IGLWDIFANRRRVNAFREILTKEDS HHHHHHHHCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA