| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is hisD
Identifier: 183221211
GI number: 183221211
Start: 1910606
End: 1911898
Strand: Reverse
Name: hisD
Synonym: LEPBI_I1825
Alternate gene names: 183221211
Gene position: 1911898-1910606 (Counterclockwise)
Preceding gene: 183221212
Following gene: 183221210
Centisome position: 53.11
GC content: 43.54
Gene sequence:
>1293_bases ATGCCAATTCCCATCTTACATTGTGATCGAAATTCCAAAGAATTGTACTCACGGTTTCTTCAGGGAGCAAGGGAAGACTT AACGACGGCAACAGACCGCATTTTACCCATTTTGGAATCAGTTCGCACCCAAGGGGATCAGGCACTTTTTTCCTACACCG AAATGTTTGATGGGATCAAACTTTCACAACTTACCATAGATCCTAAAAAAATTAAAACGAATGTTGACGAGAAAACAAAA GAAGCATTCCTCAGGGCCAAATCCAATATCGAAGCCTTCCACATGGAACAAAAACGAGAGTCTTGGTCCAAGGTCATTGA TGGGAATCGATTGGGTGTCAAATACACACCGATTCCTTCCCTGGCAGTATATGCTCCTGGTGGAAAAGCATTGTACCCTT CTAGTGTCCTTATGGGCATCATTCCAGCAAAAATTGCAGGAGTTCCTTCCATACAACTCATCACACCTCCACAAAAAGAT GGCATCCCTGAAATTTTGGTATGGTTGGCTCAGATTATGGATATTGATCGGATTGTCACAGTGGGAGGTGCCCAAGGAAT CGCCGCTGCTGCTTACGGAACCGAATCGGTACCCAAGTCAGAGTTCATTGTAGGTCCTGGGAATGCGTATGTAGCCGCCG CCAAATCGTATTTAAGTGGGCAAGGTCTGATTGGGATCGAGAGCCCCGCTGGCCCCAGTGAAGTTTGTATCATTGCCGAC GAAAATGCTAACCCAAAATGGATCGCCTGTGATATGTTATCCCAAGCGGAGCACGGTGAAGATTCCTCAGCAATCCTTCT TACAACAGATTTAACTCTTGCCAAACGAGTCAGTGAAGAATTAGAAATTGCATTTTCAGAAAGGCCAAAACGATTGCAGA TGAAGCAGACTGCAATTTACGAAAACTCAAGTATCCTTGTTTTTCCTACCTTGGATGATTGTATTTGGTTTTCCAATGAA CTTGCCCCGGAACACTTAGAAATCCAAACGAAGGACTATGAATCGGTGTTTGCAAAAATCGAACATGCTGGCAGTGTATT CCTCGGTCCTTATTCACCAGTTGCGATGGGAGATTATATCTCAGGAACCAATCATATTTTGCCAACAGCAAGAGGCAGTC GTATTTATTCATCTTTAGGAGTTGATACATTTCTGAAACGTGTCACATTCCAAGAAGTCACAAAAGAATCCCTCGAGAAC TTGTATCCATTTGTCAAACTCATGTCTGAATTGGAAGGACTTGACGAAGAACATGGAACTAGTGTGAAAGTCCGAACGAG GCAATTCCAATGA
Upstream 100 bases:
>100_bases AAATCAGGACTCGAACTCGGCCCACGTTACCAAATCGAAATCTCTTCTCGTTTTTGACAAAAAGCTTGTTTAGGAAGGCA CTTCCTTCCAAGCTGAATTT
Downstream 100 bases:
>100_bases TCGTTGTATCAGAGATTGCAGATCTAAAAACGATCATTTCCGAATGGAAACAAAATCAGGAAACCATTGGGTTTTGTCCG ACAATGGGTACCCTTCATGA
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MPIPILHCDRNSKELYSRFLQGAREDLTTATDRILPILESVRTQGDQALFSYTEMFDGIKLSQLTIDPKKIKTNVDEKTK EAFLRAKSNIEAFHMEQKRESWSKVIDGNRLGVKYTPIPSLAVYAPGGKALYPSSVLMGIIPAKIAGVPSIQLITPPQKD GIPEILVWLAQIMDIDRIVTVGGAQGIAAAAYGTESVPKSEFIVGPGNAYVAAAKSYLSGQGLIGIESPAGPSEVCIIAD ENANPKWIACDMLSQAEHGEDSSAILLTTDLTLAKRVSEELEIAFSERPKRLQMKQTAIYENSSILVFPTLDDCIWFSNE LAPEHLEIQTKDYESVFAKIEHAGSVFLGPYSPVAMGDYISGTNHILPTARGSRIYSSLGVDTFLKRVTFQEVTKESLEN LYPFVKLMSELEGLDEEHGTSVKVRTRQFQ
Sequences:
>Translated_430_residues MPIPILHCDRNSKELYSRFLQGAREDLTTATDRILPILESVRTQGDQALFSYTEMFDGIKLSQLTIDPKKIKTNVDEKTK EAFLRAKSNIEAFHMEQKRESWSKVIDGNRLGVKYTPIPSLAVYAPGGKALYPSSVLMGIIPAKIAGVPSIQLITPPQKD GIPEILVWLAQIMDIDRIVTVGGAQGIAAAAYGTESVPKSEFIVGPGNAYVAAAKSYLSGQGLIGIESPAGPSEVCIIAD ENANPKWIACDMLSQAEHGEDSSAILLTTDLTLAKRVSEELEIAFSERPKRLQMKQTAIYENSSILVFPTLDDCIWFSNE LAPEHLEIQTKDYESVFAKIEHAGSVFLGPYSPVAMGDYISGTNHILPTARGSRIYSSLGVDTFLKRVTFQEVTKESLEN LYPFVKLMSELEGLDEEHGTSVKVRTRQFQ >Mature_429_residues PIPILHCDRNSKELYSRFLQGAREDLTTATDRILPILESVRTQGDQALFSYTEMFDGIKLSQLTIDPKKIKTNVDEKTKE AFLRAKSNIEAFHMEQKRESWSKVIDGNRLGVKYTPIPSLAVYAPGGKALYPSSVLMGIIPAKIAGVPSIQLITPPQKDG IPEILVWLAQIMDIDRIVTVGGAQGIAAAAYGTESVPKSEFIVGPGNAYVAAAKSYLSGQGLIGIESPAGPSEVCIIADE NANPKWIACDMLSQAEHGEDSSAILLTTDLTLAKRVSEELEIAFSERPKRLQMKQTAIYENSSILVFPTLDDCIWFSNEL APEHLEIQTKDYESVFAKIEHAGSVFLGPYSPVAMGDYISGTNHILPTARGSRIYSSLGVDTFLKRVTFQEVTKESLENL YPFVKLMSELEGLDEEHGTSVKVRTRQFQ
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1788331, Length=424, Percent_Identity=39.622641509434, Blast_Score=272, Evalue=2e-74, Organism=Saccharomyces cerevisiae, GI6319819, Length=408, Percent_Identity=39.9509803921569, Blast_Score=267, Evalue=2e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HISX_LEPBA (B0S9F2)
Other databases:
- EMBL: CP000777 - RefSeq: YP_001962857.1 - GeneID: 6387233 - GenomeReviews: CP000777_GR - KEGG: lbf:LBF_1772 - HOGENOM: HBG329596 - OMA: TEWEVEK - ProtClustDB: PRK00877 - BioCyc: LBIF355278:LBF_1772-MONOMER - HAMAP: MF_01024 - InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 - PANTHER: PTHR21256:SF2 - PIRSF: PIRSF000099 - PRINTS: PR00083 - TIGRFAMs: TIGR00069
Pfam domain/function: PF00815 Histidinol_dh; SSF53720 Aldehyde_DH/Histidinol_DH
EC number: =1.1.1.23
Molecular weight: Translated: 47348; Mature: 47216
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: ACT_SITE 324-324 ACT_SITE 325-325 BINDING 124-124 BINDING 185-185 BINDING 208-208 BINDING 233-233 BINDING 255-255 BINDING 258-258 BINDING 325-325 BINDING 358-358 BINDING 412-412 BINDING 418-418
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIPILHCDRNSKELYSRFLQGAREDLTTATDRILPILESVRTQGDQALFSYTEMFDGIK CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCE LSQLTIDPKKIKTNVDEKTKEAFLRAKSNIEAFHMEQKRESWSKVIDGNRLGVKYTPIPS EEEEEECHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCC LAVYAPGGKALYPSSVLMGIIPAKIAGVPSIQLITPPQKDGIPEILVWLAQIMDIDRIVT EEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCHHHEEE VGGAQGIAAAAYGTESVPKSEFIVGPGNAYVAAAKSYLSGQGLIGIESPAGPSEVCIIAD ECCCCCCEEECCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEC ENANPKWIACDMLSQAEHGEDSSAILLTTDLTLAKRVSEELEIAFSERPKRLQMKQTAIY CCCCCCEEEEEHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHEE ENSSILVFPTLDDCIWFSNELAPEHLEIQTKDYESVFAKIEHAGSVFLGPYSPVAMGDYI CCCCEEEEECHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHCCCEEECCCCCCCCCCCC SGTNHILPTARGSRIYSSLGVDTFLKRVTFQEVTKESLENLYPFVKLMSELEGLDEEHGT CCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC SVKVRTRQFQ EEEEEECCCC >Mature Secondary Structure PIPILHCDRNSKELYSRFLQGAREDLTTATDRILPILESVRTQGDQALFSYTEMFDGIK CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCE LSQLTIDPKKIKTNVDEKTKEAFLRAKSNIEAFHMEQKRESWSKVIDGNRLGVKYTPIPS EEEEEECHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCC LAVYAPGGKALYPSSVLMGIIPAKIAGVPSIQLITPPQKDGIPEILVWLAQIMDIDRIVT EEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCHHHEEE VGGAQGIAAAAYGTESVPKSEFIVGPGNAYVAAAKSYLSGQGLIGIESPAGPSEVCIIAD ECCCCCCEEECCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEC ENANPKWIACDMLSQAEHGEDSSAILLTTDLTLAKRVSEELEIAFSERPKRLQMKQTAIY CCCCCCEEEEEHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHEE ENSSILVFPTLDDCIWFSNELAPEHLEIQTKDYESVFAKIEHAGSVFLGPYSPVAMGDYI CCCCEEEEECHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHCCCEEECCCCCCCCCCCC SGTNHILPTARGSRIYSSLGVDTFLKRVTFQEVTKESLENLYPFVKLMSELEGLDEEHGT CCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC SVKVRTRQFQ EEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA