Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183221152
Identifier: 183221152
GI number: 183221152
Start: 1843723
End: 1844361
Strand: Reverse
Name: 183221152
Synonym: LEPBI_I1766
Alternate gene names: NA
Gene position: 1844361-1843723 (Counterclockwise)
Preceding gene: 183221153
Following gene: 183221150
Centisome position: 51.24
GC content: 34.12
Gene sequence:
>639_bases GTGTTTCGAATTTTATTATGTTTACTCCCTTTTTGTTATGGTTGCTTTGAATACGAAGAAACCATCCTTTTTCGAAAATT GAATTCTGGGACAGTGGAAATCGCTTATACAGTTCCTCTAAAAAAAGATTCAAAGGAATCTCTTGTTAAATTTTTACCCA CTTCAAAAGAAGAAATCCAAAATTCAGTCAAAAAAAAATCCAATAATAATTTACAAGTGAGAGACTTTACGTTCCGTGAA TTGGAGAAATCGGAGACCACGGATATGTATTTCAAACGAAAAGGAAAGGTTTCTTACAAATTAGACTTTGAAGACCCAGT CCATTTGGAAGGTGTCCTCATAGGAACTTTTTCCATCAAACAAAAACCTAGGTCTTTATCGATCAAACGAGATTTTCCTA ACCTAACAGATAACGCCATCCTTGACTCGAGTGCAGGTGAAAAAAAAATCATTTCGGAAACATCCAGATTATTACGGGAA GGAAAAATTCAGTTTAAAGTATTGTTTCCTAAAGATTCTGAGTGTAGCTCGAATCGGGGTTTTATTGGACTTGGAAATTT AGTGTATCAAATCCCTTTACAAGAAACTTTAGAAAACCCTGAGGCTAAAACTTGGGAATACAAAATCCGATTTTTTTAA
Upstream 100 bases:
>100_bases AAGAGCTGTTAGGTTTGGATATTTTAGAACACGGAAACGAAGCCTATCCAGTTTCCAAATAGTCCTTGACCCTAGATTTC TCCGTGCGGAAGTCTAGGGT
Downstream 100 bases:
>100_bases TTATAAAAGTCCTAATTCTTTTGCTGTTTTGATAAAAAGTAGAAACCCATCCAAATTTTTTTGTTCGGGGATATAGTGTA ACTCTTGTTTTAGATAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MFRILLCLLPFCYGCFEYEETILFRKLNSGTVEIAYTVPLKKDSKESLVKFLPTSKEEIQNSVKKKSNNNLQVRDFTFRE LEKSETTDMYFKRKGKVSYKLDFEDPVHLEGVLIGTFSIKQKPRSLSIKRDFPNLTDNAILDSSAGEKKIISETSRLLRE GKIQFKVLFPKDSECSSNRGFIGLGNLVYQIPLQETLENPEAKTWEYKIRFF
Sequences:
>Translated_212_residues MFRILLCLLPFCYGCFEYEETILFRKLNSGTVEIAYTVPLKKDSKESLVKFLPTSKEEIQNSVKKKSNNNLQVRDFTFRE LEKSETTDMYFKRKGKVSYKLDFEDPVHLEGVLIGTFSIKQKPRSLSIKRDFPNLTDNAILDSSAGEKKIISETSRLLRE GKIQFKVLFPKDSECSSNRGFIGLGNLVYQIPLQETLENPEAKTWEYKIRFF >Mature_212_residues MFRILLCLLPFCYGCFEYEETILFRKLNSGTVEIAYTVPLKKDSKESLVKFLPTSKEEIQNSVKKKSNNNLQVRDFTFRE LEKSETTDMYFKRKGKVSYKLDFEDPVHLEGVLIGTFSIKQKPRSLSIKRDFPNLTDNAILDSSAGEKKIISETSRLLRE GKIQFKVLFPKDSECSSNRGFIGLGNLVYQIPLQETLENPEAKTWEYKIRFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24637; Mature: 24637
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRILLCLLPFCYGCFEYEETILFRKLNSGTVEIAYTVPLKKDSKESLVKFLPTSKEEIQ CHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEEECCCCCCHHHHHHHCCCCHHHHH NSVKKKSNNNLQVRDFTFRELEKSETTDMYFKRKGKVSYKLDFEDPVHLEGVLIGTFSIK HHHHHCCCCCEEEEECHHHHHHCCCCCCCEEEECCCEEEEECCCCCCEEEEEEEEEEEEC QKPRSLSIKRDFPNLTDNAILDSSAGEKKIISETSRLLREGKIQFKVLFPKDSECSSNRG CCCCEEEEECCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC FIGLGNLVYQIPLQETLENPEAKTWEYKIRFF EEEECCEEEECCHHHHHCCCCCCEEEEEEEEC >Mature Secondary Structure MFRILLCLLPFCYGCFEYEETILFRKLNSGTVEIAYTVPLKKDSKESLVKFLPTSKEEIQ CHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEEECCCCCCHHHHHHHCCCCHHHHH NSVKKKSNNNLQVRDFTFRELEKSETTDMYFKRKGKVSYKLDFEDPVHLEGVLIGTFSIK HHHHHCCCCCEEEEECHHHHHHCCCCCCCEEEECCCEEEEECCCCCCEEEEEEEEEEEEC QKPRSLSIKRDFPNLTDNAILDSSAGEKKIISETSRLLREGKIQFKVLFPKDSECSSNRG CCCCEEEEECCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC FIGLGNLVYQIPLQETLENPEAKTWEYKIRFF EEEECCEEEECCHHHHHCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA