| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183221132
Identifier: 183221132
GI number: 183221132
Start: 1822641
End: 1823843
Strand: Reverse
Name: 183221132
Synonym: LEPBI_I1746
Alternate gene names: NA
Gene position: 1823843-1822641 (Counterclockwise)
Preceding gene: 183221133
Following gene: 183221131
Centisome position: 50.67
GC content: 41.9
Gene sequence:
>1203_bases ATGTTCCTTGATTTTTTCTACAATCTTCGACGAGAAACGGTTCCCTGTTCTACAGGAGAACTCATCGCATTTTTAGAAAG TATCAGAAAACTAACAGACCCCACAGGCTCCATTTCTATGGAACAATTGTACAGGGTGGGTCGGCTTAATTTTGCGAAAG ACTTAAAACATTACGACTCCTATGACTTAGCGTTTGCTAAAACGTTTGGAAGTTGGAAAGAACAACGAATTCAGTTCCGA GACATTTTAATGGAGTGGTTGGAAGAAAATATCCCGAAACACCTCTCTGACGATCAAAAACAAAATGCACCCAACTTAAG TATGGAAGAGGTATTGGAAGAATTAAAAAAACGACTTGCCGAACAAAAAGAACGGCATGACGGCGGGAGTAAATGGGTAG GGACGTCCGGAACCAGTCCTTTTGGAAACTCAGGTTTTAATCCCAATGGACTCTCTATCGGGGGCAATACGGAAGGAGAA GGGAACCGGTCTGGGGTCAGTCTTTGGAATGAAAGGAAGTACAAAGCCTACCGGGAAGATCAAATTTTAGACACAAGGTC CATCCAATTGGCTTTGAAAGAACTTAGGTTCTTAAAAAAAGAAGGCAGGCGGGAACTACACGTGGATAAAACCATTGATC GAACCTGCGAAAATGGAGGAGAAATTGAACTGGTTGAGGAGAGAGAACGGAAGAATTCACTACGACTTGTCCTCATCATG GATATCGGCGGGAGTATGACCCCACATTCTGATCGGGTGAGTAAATTATTCAGTGCGAGCCGTGGATTGTATCACTTCAA GGAAGTGCATAATTACTTTTTCCATAATATCTTTCATGAATATTTGTATGCCAATCATGAGTTCCAATCCAAAATTTCAA TCAAACATTTCGAAGAAAAATTTAGAAAGAACACGAAGCTTATTTTTGTAGGGGATGCCTACATGGCCCCCTATGAATTG ATGGGAACACCTTACAATCTCTATGCGTATCATTCACACACTAAGGAAGAAAAGGAAAAAAAAGCCAAAAGTGGATTGGA ATGTTTGAGGGAACTCGTAGGGTATTTTCCTGATTCCGTCTGGCTAAACCCGGAACCCAAACGATTTTGGGGAGCTCCGA CCATCGAGGCGATCGAAGATGTTGTACCGATGTTTCCATTGACCATTGATGGATTACGAAAAGCAGTCAAACGACTGGTT TAA
Upstream 100 bases:
>100_bases GTTTTGCTTGTCTCTGGTGAATCCCTGGAATCAAACAAAATCCCATTCGCGGGTACTTTATTTAAGTCCGAAGATGATTA CAGAGTGTATCTAAACTAAT
Downstream 100 bases:
>100_bases GAAATGAATTCAGTAGATTTGATTCATTTTTGGACTCAGATTTGTCGTTAATTTATAGGAATGTCCATACAAATATCAAT CTCTAGTCTGGTCATTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Cytoplasmic Protein; Von Willebrand Factor Type A(VWA) Domain Protein; VWA Containing CoxE-Like Family Protein
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MFLDFFYNLRRETVPCSTGELIAFLESIRKLTDPTGSISMEQLYRVGRLNFAKDLKHYDSYDLAFAKTFGSWKEQRIQFR DILMEWLEENIPKHLSDDQKQNAPNLSMEEVLEELKKRLAEQKERHDGGSKWVGTSGTSPFGNSGFNPNGLSIGGNTEGE GNRSGVSLWNERKYKAYREDQILDTRSIQLALKELRFLKKEGRRELHVDKTIDRTCENGGEIELVEERERKNSLRLVLIM DIGGSMTPHSDRVSKLFSASRGLYHFKEVHNYFFHNIFHEYLYANHEFQSKISIKHFEEKFRKNTKLIFVGDAYMAPYEL MGTPYNLYAYHSHTKEEKEKKAKSGLECLRELVGYFPDSVWLNPEPKRFWGAPTIEAIEDVVPMFPLTIDGLRKAVKRLV
Sequences:
>Translated_400_residues MFLDFFYNLRRETVPCSTGELIAFLESIRKLTDPTGSISMEQLYRVGRLNFAKDLKHYDSYDLAFAKTFGSWKEQRIQFR DILMEWLEENIPKHLSDDQKQNAPNLSMEEVLEELKKRLAEQKERHDGGSKWVGTSGTSPFGNSGFNPNGLSIGGNTEGE GNRSGVSLWNERKYKAYREDQILDTRSIQLALKELRFLKKEGRRELHVDKTIDRTCENGGEIELVEERERKNSLRLVLIM DIGGSMTPHSDRVSKLFSASRGLYHFKEVHNYFFHNIFHEYLYANHEFQSKISIKHFEEKFRKNTKLIFVGDAYMAPYEL MGTPYNLYAYHSHTKEEKEKKAKSGLECLRELVGYFPDSVWLNPEPKRFWGAPTIEAIEDVVPMFPLTIDGLRKAVKRLV >Mature_400_residues MFLDFFYNLRRETVPCSTGELIAFLESIRKLTDPTGSISMEQLYRVGRLNFAKDLKHYDSYDLAFAKTFGSWKEQRIQFR DILMEWLEENIPKHLSDDQKQNAPNLSMEEVLEELKKRLAEQKERHDGGSKWVGTSGTSPFGNSGFNPNGLSIGGNTEGE GNRSGVSLWNERKYKAYREDQILDTRSIQLALKELRFLKKEGRRELHVDKTIDRTCENGGEIELVEERERKNSLRLVLIM DIGGSMTPHSDRVSKLFSASRGLYHFKEVHNYFFHNIFHEYLYANHEFQSKISIKHFEEKFRKNTKLIFVGDAYMAPYEL MGTPYNLYAYHSHTKEEKEKKAKSGLECLRELVGYFPDSVWLNPEPKRFWGAPTIEAIEDVVPMFPLTIDGLRKAVKRLV
Specific function: Unknown
COG id: COG3825
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46573; Mature: 46573
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLDFFYNLRRETVPCSTGELIAFLESIRKLTDPTGSISMEQLYRVGRLNFAKDLKHYDS CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHCCC YDLAFAKTFGSWKEQRIQFRDILMEWLEENIPKHLSDDQKQNAPNLSMEEVLEELKKRLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHCCCCCCCHHHHHHHHHHHHH EQKERHDGGSKWVGTSGTSPFGNSGFNPNGLSIGGNTEGEGNRSGVSLWNERKYKAYRED HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHH QILDTRSIQLALKELRFLKKEGRRELHVDKTIDRTCENGGEIELVEERERKNSLRLVLIM HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEHHHHCCCCEEEEEEE DIGGSMTPHSDRVSKLFSASRGLYHFKEVHNYFFHNIFHEYLYANHEFQSKISIKHFEEK ECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FRKNTKLIFVGDAYMAPYELMGTPYNLYAYHSHTKEEKEKKAKSGLECLRELVGYFPDSV HHCCCCEEEECCCHHCCHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCC WLNPEPKRFWGAPTIEAIEDVVPMFPLTIDGLRKAVKRLV CCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure MFLDFFYNLRRETVPCSTGELIAFLESIRKLTDPTGSISMEQLYRVGRLNFAKDLKHYDS CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHCCC YDLAFAKTFGSWKEQRIQFRDILMEWLEENIPKHLSDDQKQNAPNLSMEEVLEELKKRLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHCCCCCCCHHHHHHHHHHHHH EQKERHDGGSKWVGTSGTSPFGNSGFNPNGLSIGGNTEGEGNRSGVSLWNERKYKAYRED HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHH QILDTRSIQLALKELRFLKKEGRRELHVDKTIDRTCENGGEIELVEERERKNSLRLVLIM HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEHHHHCCCCEEEEEEE DIGGSMTPHSDRVSKLFSASRGLYHFKEVHNYFFHNIFHEYLYANHEFQSKISIKHFEEK ECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FRKNTKLIFVGDAYMAPYELMGTPYNLYAYHSHTKEEKEKKAKSGLECLRELVGYFPDSV HHCCCCEEEECCCHHCCHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCC WLNPEPKRFWGAPTIEAIEDVVPMFPLTIDGLRKAVKRLV CCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA