| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221082
Identifier: 183221082
GI number: 183221082
Start: 1768638
End: 1769177
Strand: Reverse
Name: 183221082
Synonym: LEPBI_I1696
Alternate gene names: NA
Gene position: 1769177-1768638 (Counterclockwise)
Preceding gene: 183221086
Following gene: 183221081
Centisome position: 49.15
GC content: 37.96
Gene sequence:
>540_bases ATGTCTTGGAAAACTTACTACAATTTGTTGCAGCCATCTAGGAAGTCCGTATTTTCTCCCAACCATTCGTTCTCCATTCT CTCTTTTCTTCTCTTAGTGTCCGTATTTTTCTTTGGATCTTGCGGAGCGAAGAACCAAACAACGGTTCTAGAGACAAGGA AAGCCTATCTGAAGGGAGTTGGTTTGCCCATCCTTGTTTCCATCCATCCAAGGCACAATCGTGAGAAAAAAGAATTACAA CTTTTTATCAAAACAGAAAACCTAACCAAGATTAACATCACCAAATTTCAAATATTGTTTTTTGCAAGTGACCAAAATCG TCAATTTCTCATTCCCGAAGAACAAAAAACTCCCGAACTCATTTGTTCCATTCCAAAACAGATTCAACCAAATTCTATCT ACAAATGCCATGTAGGACCATTTGTGTACCAACAAATTTGGAATTCTATTCATATCCTATCGATTTCGTTCACAACAGAA GACCAAATCCGCCATGTCATCAGCGAAGATGATTTGGATGATGTTGTCCTTTGGTTGTAA
Upstream 100 bases:
>100_bases AAATTCATAAATCTTATGAGGGCTAAAATGAGATTTTGAGTTTGTTTCTCAATTAAGAACCAAACCTTTCCAACAAAGGA AAAGGGATTGAGCCAATACA
Downstream 100 bases:
>100_bases ATAAACAATCGTTATCATTGGAAAAAAAATTGGACAAAATGTTACAAAAGAAACTGTTTCAAAATTCCATTCGTGTTGAC ACTATGTACCACACAAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MSWKTYYNLLQPSRKSVFSPNHSFSILSFLLLVSVFFFGSCGAKNQTTVLETRKAYLKGVGLPILVSIHPRHNREKKELQ LFIKTENLTKINITKFQILFFASDQNRQFLIPEEQKTPELICSIPKQIQPNSIYKCHVGPFVYQQIWNSIHILSISFTTE DQIRHVISEDDLDDVVLWL
Sequences:
>Translated_179_residues MSWKTYYNLLQPSRKSVFSPNHSFSILSFLLLVSVFFFGSCGAKNQTTVLETRKAYLKGVGLPILVSIHPRHNREKKELQ LFIKTENLTKINITKFQILFFASDQNRQFLIPEEQKTPELICSIPKQIQPNSIYKCHVGPFVYQQIWNSIHILSISFTTE DQIRHVISEDDLDDVVLWL >Mature_178_residues SWKTYYNLLQPSRKSVFSPNHSFSILSFLLLVSVFFFGSCGAKNQTTVLETRKAYLKGVGLPILVSIHPRHNREKKELQL FIKTENLTKINITKFQILFFASDQNRQFLIPEEQKTPELICSIPKQIQPNSIYKCHVGPFVYQQIWNSIHILSISFTTED QIRHVISEDDLDDVVLWL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20844; Mature: 20713
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWKTYYNLLQPSRKSVFSPNHSFSILSFLLLVSVFFFGSCGAKNQTTVLETRKAYLKGV CCHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC GLPILVSIHPRHNREKKELQLFIKTENLTKINITKFQILFFASDQNRQFLIPEEQKTPEL CCEEEEEECCCCCCCCEEEEEEEEECCEEEEEEEEEEEEEEECCCCCEEECCCCCCCHHH ICSIPKQIQPNSIYKCHVGPFVYQQIWNSIHILSISFTTEDQIRHVISEDDLDDVVLWL HHCCCCCCCCCCEEEEECCHHHHHHHHCCEEEEEEEECCHHHHHHHHCCCCCCCEEEEC >Mature Secondary Structure SWKTYYNLLQPSRKSVFSPNHSFSILSFLLLVSVFFFGSCGAKNQTTVLETRKAYLKGV CHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC GLPILVSIHPRHNREKKELQLFIKTENLTKINITKFQILFFASDQNRQFLIPEEQKTPEL CCEEEEEECCCCCCCCEEEEEEEEECCEEEEEEEEEEEEEEECCCCCEEECCCCCCCHHH ICSIPKQIQPNSIYKCHVGPFVYQQIWNSIHILSISFTTEDQIRHVISEDDLDDVVLWL HHCCCCCCCCCCEEEEECCHHHHHHHHCCEEEEEEEECCHHHHHHHHCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA