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The map label for this gene is rfbU [H]

Identifier: 183221024

GI number: 183221024

Start: 1712891

End: 1714030

Strand: Direct

Name: rfbU [H]

Synonym: LEPBI_I1637

Alternate gene names: 183221024

Gene position: 1712891-1714030 (Clockwise)

Preceding gene: 183221023

Following gene: 183221026

Centisome position: 47.58

GC content: 38.77

Gene sequence:

>1140_bases
ATGGTAAAAACATATAAAATTGGTGTGGATGCCAGGCCTCTTTCCACCCGAGTATCTGGAGTTGGTCGTCTCATTGCAGA
GACATTAAAAGCATTCCCGAACAAAGAGAAGTATGAGTTTTTACTGTTTTCACATTTGCCAATTCACCCAGATCATAAGG
CTGTATTAGAGTTACCGAATGTTCGTTGGGTGAATGGGGGTGGAGTTTTAAAATGGAAAGGTGGATTGTATTATAACCTA
TATATTCCATTTTACTTATTCATTCATCGATTGGATTTGTTTTGGGGCTCACAACAAGTATTGCCACCTTTTTTACCTGG
CGATTTAAAAGCCGTACTTACGTATTGTGATTTGGTTTTATATTTATATCCGAATACCATGCGTTGGATTGCAAAAATCC
AACAAAGAATGTTTCAACGGTATTCTGTTATGCGGTCTAGTTTTATTTTGTCCATTTCGAAACAAACAAGTGATGATATG
TGCAAAAAATTTGGATATCCTGTTGAACAAACAGGAGTGGCCTATCCTGGTGTGAATCCACAAGAGATGACAAGGCTTTT
GGACACTCCGATTTCGAACCGTGTGAAAGATTTGGGAACAGGGTATCTATTGTCTGTCTCTACCATTGAGCCTAGGAAAA
ACTATCCGTTTTTATTGGAAGCATATCGAGAGTATCGAAAAAGAAACCCACATCACTACAGACCTTGGGTCATTGTCGGA
AAAATTGGTTGGGAATCACCCGAATTCATTGAGGAACTCATCCAAGAAAGAACCCTTTACAAAGATATTTTTTTATTGGA
TTCTGTTTCCGATTCTGAACTCCAACATGTTTACAAACGAGCAGGTTTATTTGTTTTCGCGAGTAAGTATGAAGGATTTG
GGATTCCGATGGTGGAAGCCTTGTTTCATAAGATTCCTTGTATTGTTTCCGACATTCCTACCTTCCATGAAATTGGAAAA
GACGGAGTGATTTATTTACCCATTGGAACAAAAGAAGATGCGAAAGGTTGGGCTCTGGCGATTGACAGTTTTTTTCAAAA
TCCAATGCCGATGGATGTTTCGATTGAAACGTTTCGATGGGAAAATGCGGCCCAGATCACCGAAGGGGTATTTAAAAAAG
TTTTAGAAGAAGGAGAGTAA

Upstream 100 bases:

>100_bases
CCACACTATCCTTTGGACTGGTCGCTGGGAAAAAAAAGGCAGTGGAATACCTTTTCTCTAAAATTGATTTGCACCAACTA
TCGCTTAAGGTAAAGGAACG

Downstream 100 bases:

>100_bases
TCCCTTCTTTTTTGACACAACACCCGAAAATAAAATTTTTGTTTTATCAGATTTGGGAACAACATGCAAATGGAACCGGT
CGCTTGTCATCGCTTGGATT

Product: putative glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MVKTYKIGVDARPLSTRVSGVGRLIAETLKAFPNKEKYEFLLFSHLPIHPDHKAVLELPNVRWVNGGGVLKWKGGLYYNL
YIPFYLFIHRLDLFWGSQQVLPPFLPGDLKAVLTYCDLVLYLYPNTMRWIAKIQQRMFQRYSVMRSSFILSISKQTSDDM
CKKFGYPVEQTGVAYPGVNPQEMTRLLDTPISNRVKDLGTGYLLSVSTIEPRKNYPFLLEAYREYRKRNPHHYRPWVIVG
KIGWESPEFIEELIQERTLYKDIFLLDSVSDSELQHVYKRAGLFVFASKYEGFGIPMVEALFHKIPCIVSDIPTFHEIGK
DGVIYLPIGTKEDAKGWALAIDSFFQNPMPMDVSIETFRWENAAQITEGVFKKVLEEGE

Sequences:

>Translated_379_residues
MVKTYKIGVDARPLSTRVSGVGRLIAETLKAFPNKEKYEFLLFSHLPIHPDHKAVLELPNVRWVNGGGVLKWKGGLYYNL
YIPFYLFIHRLDLFWGSQQVLPPFLPGDLKAVLTYCDLVLYLYPNTMRWIAKIQQRMFQRYSVMRSSFILSISKQTSDDM
CKKFGYPVEQTGVAYPGVNPQEMTRLLDTPISNRVKDLGTGYLLSVSTIEPRKNYPFLLEAYREYRKRNPHHYRPWVIVG
KIGWESPEFIEELIQERTLYKDIFLLDSVSDSELQHVYKRAGLFVFASKYEGFGIPMVEALFHKIPCIVSDIPTFHEIGK
DGVIYLPIGTKEDAKGWALAIDSFFQNPMPMDVSIETFRWENAAQITEGVFKKVLEEGE
>Mature_379_residues
MVKTYKIGVDARPLSTRVSGVGRLIAETLKAFPNKEKYEFLLFSHLPIHPDHKAVLELPNVRWVNGGGVLKWKGGLYYNL
YIPFYLFIHRLDLFWGSQQVLPPFLPGDLKAVLTYCDLVLYLYPNTMRWIAKIQQRMFQRYSVMRSSFILSISKQTSDDM
CKKFGYPVEQTGVAYPGVNPQEMTRLLDTPISNRVKDLGTGYLLSVSTIEPRKNYPFLLEAYREYRKRNPHHYRPWVIVG
KIGWESPEFIEELIQERTLYKDIFLLDSVSDSELQHVYKRAGLFVFASKYEGFGIPMVEALFHKIPCIVSDIPTFHEIGK
DGVIYLPIGTKEDAKGWALAIDSFFQNPMPMDVSIETFRWENAAQITEGVFKKVLEEGE

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 43800; Mature: 43800

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKTYKIGVDARPLSTRVSGVGRLIAETLKAFPNKEKYEFLLFSHLPIHPDHKAVLELPN
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHEECCC
VRWVNGGGVLKWKGGLYYNLYIPFYLFIHRLDLFWGSQQVLPPFLPGDLKAVLTYCDLVL
EEEECCCCEEEECCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
YLYPNTMRWIAKIQQRMFQRYSVMRSSFILSISKQTSDDMCKKFGYPVEQTGVAYPGVNP
HHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHCCCCHHHCCCCCCCCCH
QEMTRLLDTPISNRVKDLGTGYLLSVSTIEPRKNYPFLLEAYREYRKRNPHHYRPWVIVG
HHHHHHHCCCHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEE
KIGWESPEFIEELIQERTLYKDIFLLDSVSDSELQHVYKRAGLFVFASKYEGFGIPMVEA
ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEEECCCCCCCHHHHH
LFHKIPCIVSDIPTFHEIGKDGVIYLPIGTKEDAKGWALAIDSFFQNPMPMDVSIETFRW
HHHHCCHHHHCCCHHHHCCCCCEEEEECCCCCCCCHHEEEHHHHHCCCCCCCEEEEEEEC
ENAAQITEGVFKKVLEEGE
CCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKTYKIGVDARPLSTRVSGVGRLIAETLKAFPNKEKYEFLLFSHLPIHPDHKAVLELPN
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHEECCC
VRWVNGGGVLKWKGGLYYNLYIPFYLFIHRLDLFWGSQQVLPPFLPGDLKAVLTYCDLVL
EEEECCCCEEEECCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
YLYPNTMRWIAKIQQRMFQRYSVMRSSFILSISKQTSDDMCKKFGYPVEQTGVAYPGVNP
HHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHCCCCHHHCCCCCCCCCH
QEMTRLLDTPISNRVKDLGTGYLLSVSTIEPRKNYPFLLEAYREYRKRNPHHYRPWVIVG
HHHHHHHCCCHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEE
KIGWESPEFIEELIQERTLYKDIFLLDSVSDSELQHVYKRAGLFVFASKYEGFGIPMVEA
ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEEECCCCCCCHHHHH
LFHKIPCIVSDIPTFHEIGKDGVIYLPIGTKEDAKGWALAIDSFFQNPMPMDVSIETFRW
HHHHCCHHHHCCCHHHHCCCCCEEEEECCCCCCCCHHEEEHHHHHCCCCCCCEEEEEEEC
ENAAQITEGVFKKVLEEGE
CCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]