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The map label for this gene is ylbK [H]

Identifier: 183221016

GI number: 183221016

Start: 1701817

End: 1703523

Strand: Reverse

Name: ylbK [H]

Synonym: LEPBI_I1629

Alternate gene names: 183221016

Gene position: 1703523-1701817 (Counterclockwise)

Preceding gene: 183221025

Following gene: 183221005

Centisome position: 47.32

GC content: 40.42

Gene sequence:

>1707_bases
ATGAAAGATCTTGAAGGCAAAATCCACCTCGTATCGAGTTTACCCCTCTTCCGTAGTCTTTCCAAAAAAGAAAAAACCTG
GGTCGCTGAGTCTGTTCACATTGTGGAACGGGAAAGAGATGAACTTCTTTTTACGGCGGGAGACAGCGACAGAAGTTTGT
TTCTAATTTTGTCTGGTGGGATCAAATTATTCCTTCCGAAGAAAGGGGAAGGAAAACGGGAAGAAGAAGTACAGTATCTA
AAAAAAGGAGAGTACTTCGGCATCCAAGCATTACTAACAGGAGAAAAGCACAACCATACAGCTGTTACCGTAAGCGAGTC
TCGATTTCTGGTTTTATCCCAATCGGAATTCCAGAAGTTAATTCAAAAAATTCCATATCTTTCCATCACCTTTTCGAAAA
TGCTCACCAAATCCTTACGAGGGGAACTCCTCGGAGGAAAAGAATACTTTCGTAATTCCGTTGTCTGTTTGGTGCATTCT
GATCCGATTACAAAAGATCGATTTGCTTCGGAACTCGTTGAGAAAATAGAATCCGAATCAGGTAAAAAAGCTGTCATCCT
CCATTTTTCGCAAAATGGAAATGTTTCTTCCCCTCATACCAAAACTTATAAATTCAAAGATGCTGACCGTATCAAAGAAA
CCTTAGGAAAACATTATGCGAGTCATTCTTTTATCTTTTTAGAAGTATTCCCAGAAACAGAGGAAGAACTGAAACATCTG
TTAATTGATGAATCTGACCATATTGAAAACTTGGTTTCTTTGGAATATAAAACCAATCTTTGTGATTCGATCACAAAAGA
TGCCAAAGAGAACGAGATCCTCTACCACGAGACCAATATCCGAGAGATTTTAGACCATGGAAAATGGGATATTTTTATCA
GGCGGAAGGCAAGAGAACTTTCAGGTGTGGAAATGGGTGTGGCCCTCGGAGGCGGAGCAGCACTTGGACTTGCCCAAGTG
GGGATCATGAAAGTTTTGGACGAGGAAGGGATCATACCCGATATGATCTCTGGAACAAGCATTGGTGCCATCATCGGTGC
CTTTTGGGCCAGTGGACTCGGTTATAAAGGGATCCTACCTTTACTCGGTGAAATTGATAGCCTTTTCAAAATGTTCAAAC
TGGTGGATTTATCCTTTCCTGGACAAGGTTTACTCCATGGGAAACATGTTCGTACTCTTCTGGAAAAGTATTTAGGAGAT
TTATACTTCGAAGACCTTCCCATCAAACTGCGGCTCATCAGTTGTGACATTTCCACAAGGCAAGAAATTGTACTTTCGGA
AGGAAAGGTATTGGATGCTGTTATGGCAAGTATCTCCATTCCAGGAGTTTTTGTCCCCCAACCGCAAGAGAATGGAAAAA
CCTATGTGGATGGAGGGATTGTCAATCCCCTGCCCGTTTCAGCACTCACTCAAGAAGGCATTCAAAAGATCGTCGCCATC
AATTCCATGCCAAGTTCCAAAGATGAAATGAAAACAAACAAACTTTTAAATTTGAATGTACTCGATATCATTGTGAATAG
TTTGTATTCACTTCAATATAGAATTGGGAAGTATAGTGCCCAAGAAGCAGATGTATATTTAAATCCAATCCTTCCCAATT
CCAATTGGTTTGAGTTTTGGCGGAGTAAAGAATTCATTGAACTCGGCGAAACTGTAGCCAAAAGTTCCTTACAGGAAATC
AAACAACTGTTTAGCGAAAAAAATTAA

Upstream 100 bases:

>100_bases
CTACTTAACATACAAGTAGTCAATAAAATTTTTTAGAAAACTTAAAAAATCGCAATTTCTCTTCCCTTCCTTTCTGAAAC
TCTGGTGGAAAAGGTGACTT

Downstream 100 bases:

>100_bases
TCTCTGTCGGGGGAGAGGATCACGATATTAAACGGGTTCCTTTCATTTTTTTCGGACTCAGATAAAGTTTCCGAAAAACG
TAAAGCACCTGTGATCACTG

Product: putative cyclic nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MKDLEGKIHLVSSLPLFRSLSKKEKTWVAESVHIVERERDELLFTAGDSDRSLFLILSGGIKLFLPKKGEGKREEEVQYL
KKGEYFGIQALLTGEKHNHTAVTVSESRFLVLSQSEFQKLIQKIPYLSITFSKMLTKSLRGELLGGKEYFRNSVVCLVHS
DPITKDRFASELVEKIESESGKKAVILHFSQNGNVSSPHTKTYKFKDADRIKETLGKHYASHSFIFLEVFPETEEELKHL
LIDESDHIENLVSLEYKTNLCDSITKDAKENEILYHETNIREILDHGKWDIFIRRKARELSGVEMGVALGGGAALGLAQV
GIMKVLDEEGIIPDMISGTSIGAIIGAFWASGLGYKGILPLLGEIDSLFKMFKLVDLSFPGQGLLHGKHVRTLLEKYLGD
LYFEDLPIKLRLISCDISTRQEIVLSEGKVLDAVMASISIPGVFVPQPQENGKTYVDGGIVNPLPVSALTQEGIQKIVAI
NSMPSSKDEMKTNKLLNLNVLDIIVNSLYSLQYRIGKYSAQEADVYLNPILPNSNWFEFWRSKEFIELGETVAKSSLQEI
KQLFSEKN

Sequences:

>Translated_568_residues
MKDLEGKIHLVSSLPLFRSLSKKEKTWVAESVHIVERERDELLFTAGDSDRSLFLILSGGIKLFLPKKGEGKREEEVQYL
KKGEYFGIQALLTGEKHNHTAVTVSESRFLVLSQSEFQKLIQKIPYLSITFSKMLTKSLRGELLGGKEYFRNSVVCLVHS
DPITKDRFASELVEKIESESGKKAVILHFSQNGNVSSPHTKTYKFKDADRIKETLGKHYASHSFIFLEVFPETEEELKHL
LIDESDHIENLVSLEYKTNLCDSITKDAKENEILYHETNIREILDHGKWDIFIRRKARELSGVEMGVALGGGAALGLAQV
GIMKVLDEEGIIPDMISGTSIGAIIGAFWASGLGYKGILPLLGEIDSLFKMFKLVDLSFPGQGLLHGKHVRTLLEKYLGD
LYFEDLPIKLRLISCDISTRQEIVLSEGKVLDAVMASISIPGVFVPQPQENGKTYVDGGIVNPLPVSALTQEGIQKIVAI
NSMPSSKDEMKTNKLLNLNVLDIIVNSLYSLQYRIGKYSAQEADVYLNPILPNSNWFEFWRSKEFIELGETVAKSSLQEI
KQLFSEKN
>Mature_568_residues
MKDLEGKIHLVSSLPLFRSLSKKEKTWVAESVHIVERERDELLFTAGDSDRSLFLILSGGIKLFLPKKGEGKREEEVQYL
KKGEYFGIQALLTGEKHNHTAVTVSESRFLVLSQSEFQKLIQKIPYLSITFSKMLTKSLRGELLGGKEYFRNSVVCLVHS
DPITKDRFASELVEKIESESGKKAVILHFSQNGNVSSPHTKTYKFKDADRIKETLGKHYASHSFIFLEVFPETEEELKHL
LIDESDHIENLVSLEYKTNLCDSITKDAKENEILYHETNIREILDHGKWDIFIRRKARELSGVEMGVALGGGAALGLAQV
GIMKVLDEEGIIPDMISGTSIGAIIGAFWASGLGYKGILPLLGEIDSLFKMFKLVDLSFPGQGLLHGKHVRTLLEKYLGD
LYFEDLPIKLRLISCDISTRQEIVLSEGKVLDAVMASISIPGVFVPQPQENGKTYVDGGIVNPLPVSALTQEGIQKIVAI
NSMPSSKDEMKTNKLLNLNVLDIIVNSLYSLQYRIGKYSAQEADVYLNPILPNSNWFEFWRSKEFIELGETVAKSSLQEI
KQLFSEKN

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI148727335, Length=617, Percent_Identity=22.8525121555916, Blast_Score=99, Evalue=8e-21,
Organism=Homo sapiens, GI148727290, Length=618, Percent_Identity=22.9773462783171, Blast_Score=99, Evalue=9e-21,
Organism=Homo sapiens, GI260656043, Length=199, Percent_Identity=30.1507537688442, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI260656041, Length=199, Percent_Identity=30.1507537688442, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI116256487, Length=199, Percent_Identity=30.1507537688442, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI260656039, Length=199, Percent_Identity=30.1507537688442, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI260656037, Length=199, Percent_Identity=30.1507537688442, Blast_Score=84, Evalue=5e-16,
Organism=Escherichia coli, GI226510936, Length=300, Percent_Identity=24.6666666666667, Blast_Score=102, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI193204778, Length=196, Percent_Identity=30.1020408163265, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI71997299, Length=232, Percent_Identity=31.8965517241379, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71997289, Length=232, Percent_Identity=31.8965517241379, Blast_Score=74, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6323581, Length=216, Percent_Identity=33.3333333333333, Blast_Score=110, Evalue=5e-25,
Organism=Drosophila melanogaster, GI28571388, Length=191, Percent_Identity=33.5078534031414, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI281376913, Length=190, Percent_Identity=33.1578947368421, Blast_Score=91, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 63758; Mature: 63758

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLEGKIHLVSSLPLFRSLSKKEKTWVAESVHIVERERDELLFTAGDSDRSLFLILSGG
CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECC
IKLFLPKKGEGKREEEVQYLKKGEYFGIQALLTGEKHNHTAVTVSESRFLVLSQSEFQKL
EEEEEECCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEECCEEEEEEHHHHHHH
IQKIPYLSITFSKMLTKSLRGELLGGKEYFRNSVVCLVHSDPITKDRFASELVEKIESES
HHHCCCEEEEHHHHHHHHHHHCCCCCHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCC
GKKAVILHFSQNGNVSSPHTKTYKFKDADRIKETLGKHYASHSFIFLEVFPETEEELKHL
CCEEEEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHH
LIDESDHIENLVSLEYKTNLCDSITKDAKENEILYHETNIREILDHGKWDIFIRRKAREL
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCCCEEEEEEEHHHHC
SGVEMGVALGGGAALGLAQVGIMKVLDEEGIIPDMISGTSIGAIIGAFWASGLGYKGILP
CCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHH
LLGEIDSLFKMFKLVDLSFPGQGLLHGKHVRTLLEKYLGDLYFEDLPIKLRLISCDISTR
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCEEEEEEEECCCCC
QEIVLSEGKVLDAVMASISIPGVFVPQPQENGKTYVDGGIVNPLPVSALTQEGIQKIVAI
HHHHHCCCHHHHHHHHHHCCCEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHC
NSMPSSKDEMKTNKLLNLNVLDIIVNSLYSLQYRIGKYSAQEADVYLNPILPNSNWFEFW
CCCCCCHHHHHHCCEECCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHH
RSKEFIELGETVAKSSLQEIKQLFSEKN
CCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKDLEGKIHLVSSLPLFRSLSKKEKTWVAESVHIVERERDELLFTAGDSDRSLFLILSGG
CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECC
IKLFLPKKGEGKREEEVQYLKKGEYFGIQALLTGEKHNHTAVTVSESRFLVLSQSEFQKL
EEEEEECCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEECCEEEEEEHHHHHHH
IQKIPYLSITFSKMLTKSLRGELLGGKEYFRNSVVCLVHSDPITKDRFASELVEKIESES
HHHCCCEEEEHHHHHHHHHHHCCCCCHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCC
GKKAVILHFSQNGNVSSPHTKTYKFKDADRIKETLGKHYASHSFIFLEVFPETEEELKHL
CCEEEEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHH
LIDESDHIENLVSLEYKTNLCDSITKDAKENEILYHETNIREILDHGKWDIFIRRKAREL
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCCCEEEEEEEHHHHC
SGVEMGVALGGGAALGLAQVGIMKVLDEEGIIPDMISGTSIGAIIGAFWASGLGYKGILP
CCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHH
LLGEIDSLFKMFKLVDLSFPGQGLLHGKHVRTLLEKYLGDLYFEDLPIKLRLISCDISTR
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCEEEEEEEECCCCC
QEIVLSEGKVLDAVMASISIPGVFVPQPQENGKTYVDGGIVNPLPVSALTQEGIQKIVAI
HHHHHCCCHHHHHHHHHHCCCEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHC
NSMPSSKDEMKTNKLLNLNVLDIIVNSLYSLQYRIGKYSAQEADVYLNPILPNSNWFEFW
CCCCCCHHHHHHCCEECCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHH
RSKEFIELGETVAKSSLQEIKQLFSEKN
CCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]