| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221005
Identifier: 183221005
GI number: 183221005
Start: 1691205
End: 1693136
Strand: Reverse
Name: 183221005
Synonym: LEPBI_I1618
Alternate gene names: NA
Gene position: 1693136-1691205 (Counterclockwise)
Preceding gene: 183221016
Following gene: 183221004
Centisome position: 47.04
GC content: 38.51
Gene sequence:
>1932_bases TTGGAACCAAATATGATTGGGAAAGAAACATTTCATAAGATTTCTTTTGTTTTTCTGGCATTCTTTTTTGCCCTATCCCC TATATCCATCAGCCTAAGCCAAATCTTCGCAGGCCTTTCTCTCTTCTTTCTTTTTTTGGACCAAATGAAGAAAAGAAAAC TCCCCCAGATTCCCATCGCACTTATTTTTTGGACGGGTTTGTATTTGAGTTTTTTACTCACACCACTCATCGAGAACCAG ACGATCCAATGGAAAAAAGATATCGTGAAATCTGAGTTTGGTGATCTATGGATGGGATTTTTGTTACTCCACCAAACATA TCTTAAGGATCGCGAAAAAAAAAGAATCCAAAACTTTGTTTTTTTAGGTGCGATCATCCTTATCCTTTCCGGGACTATTT CCCTTTTTTTCCCCTACCGACTCGCACCATTTGTTATGGACGGTTTACGTCATATAGAAGGGAAACGGCTTCCCCACCTT TTGGCAAATGTCCACGGTATATCCGTTTATTTACCCATTGGTTTCCAAAGTACACACTTAACTTACGGGGGACTCTTAGC CGTATATTTGCCTTCTCTTTGGGAAAAATCGTATCGTTTGCTTTCGAAAAAAAAGCGGATGATCCAATTTTGGAAAACCT CTCTCCTAACTCTTTCGGTTTCCGGATTTGGGATGGTATTACTTCTTTTAAACCAGAGTCGATCCATTTGGATCGGAATC TTTTTAGGAACCATTCTCCTCTTACAAAAATCAAAAAGTTCGATCAAATCGATTTTACCGTGGGTGTTAACGGGAATATT TTTTTTACTCATGTCGTTTTTACTTTTTTATCATTCCAATTGGTTATTCCAAAGAGCGATCGATGATCTTTTCGCTAAAC GTTCGTTAGAGAACCAAAGGATCTGGATTCATAAAATGAATTATTCCATCCTAAAAGAAAATTTGGTTTTTGGAATTGGG GGAGGAAATTATGAGAATCGTTTCATAGACATTGCCATTCCCATCGTAAATGAAATCCCCGCACTCTATTATGATTTATC GATCACTCCCAAATCCCATGCTCATTTTGATGTATTACATGATTTGATACTGGGTGGGTTGTTTGCCTTTTTATTCTATT TGGGATTTTTATGGTCTATCACGAAACAAATTGATACTACCAATCGAAAGTATGTTTTTTATTTAGGTATTCCGATAGTT CTTTTTGCTGGTAGTTTTCAATGTTATTTGTTAGATGATGAAGTTTTACTTCCCTTTATGGGTCTTTTGGCCTTACTTCC CATTTTAAAATTCACTCCAAAAAATGAATTCCAATCCAAACCAAATGAGAGTCTCTTCCAAACTCTTTTCCAGAATCTAA AAATAGAAACACTTTCCTTCTCATTTGGACTCATTCTTTTTTGGATCTTCTTCTCCCTTACAGTCACCTATCTATGGAGT CGCACAGAAAACGCGGAATTGGTTTTGCATCGAACAAGAACAAATCAAAACTTTCCTAGTCCTCTCTCTCAATTGTCCGT CAATGCCAAATCCCCCATCCCTCTCCCCGTTCCCACAAAACAAATGTATTTCAAACTATCGGGTTGTTTGGACCAAGTTC TGAACTTTCGAAAGGACCCCTCGCCTAGACTGAAACCAATACAATTGGAAATTCTTTGGGACAAGGAAGTAGAAACAAAC TTACCGAATCGGTTGACAGTCGAGATTCGCAAACGAGAAAGTTTTGACCAAGACAAAGAATACCGAGTACAAAAGGAATC TGTTGTCAAAACCTTCGCCGTGCCATTGAATCGTAAGGATGTTCAGATCGTTGTGGATCCAAGGGAATTCGTTACGGAAA CTCCTGCATTTGTGGATTTTGGGTTTTGGTATGAATGGGATTCGGTAAGCCCCCATTTGCCAAGACTTCGGATCCTTGGG AATTGCGATTGA
Upstream 100 bases:
>100_bases ATCGGATACAATCCCCAATATTTTTTTCTTCATTGAAGGTAATGATGGCCACCGACAATTTTCTTTTTCTCTTGCCTTCC ATAGGAGTTAAAACCTATTC
Downstream 100 bases:
>100_bases GAGTCCGCGGGGTCGCTACGAGATGTTGATTTGAGTTTTGTTTGATTGGGAAAGTCCGCGGGAATCGCTTCGATCTTCGG CCATCCTGGCCTTTCGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: O-Antigen Ligase; Exopolysaccharide Production Protein; Lipid A Core -O-Antigen Ligase
Number of amino acids: Translated: 643; Mature: 643
Protein sequence:
>643_residues MEPNMIGKETFHKISFVFLAFFFALSPISISLSQIFAGLSLFFLFLDQMKKRKLPQIPIALIFWTGLYLSFLLTPLIENQ TIQWKKDIVKSEFGDLWMGFLLLHQTYLKDREKKRIQNFVFLGAIILILSGTISLFFPYRLAPFVMDGLRHIEGKRLPHL LANVHGISVYLPIGFQSTHLTYGGLLAVYLPSLWEKSYRLLSKKKRMIQFWKTSLLTLSVSGFGMVLLLLNQSRSIWIGI FLGTILLLQKSKSSIKSILPWVLTGIFFLLMSFLLFYHSNWLFQRAIDDLFAKRSLENQRIWIHKMNYSILKENLVFGIG GGNYENRFIDIAIPIVNEIPALYYDLSITPKSHAHFDVLHDLILGGLFAFLFYLGFLWSITKQIDTTNRKYVFYLGIPIV LFAGSFQCYLLDDEVLLPFMGLLALLPILKFTPKNEFQSKPNESLFQTLFQNLKIETLSFSFGLILFWIFFSLTVTYLWS RTENAELVLHRTRTNQNFPSPLSQLSVNAKSPIPLPVPTKQMYFKLSGCLDQVLNFRKDPSPRLKPIQLEILWDKEVETN LPNRLTVEIRKRESFDQDKEYRVQKESVVKTFAVPLNRKDVQIVVDPREFVTETPAFVDFGFWYEWDSVSPHLPRLRILG NCD
Sequences:
>Translated_643_residues MEPNMIGKETFHKISFVFLAFFFALSPISISLSQIFAGLSLFFLFLDQMKKRKLPQIPIALIFWTGLYLSFLLTPLIENQ TIQWKKDIVKSEFGDLWMGFLLLHQTYLKDREKKRIQNFVFLGAIILILSGTISLFFPYRLAPFVMDGLRHIEGKRLPHL LANVHGISVYLPIGFQSTHLTYGGLLAVYLPSLWEKSYRLLSKKKRMIQFWKTSLLTLSVSGFGMVLLLLNQSRSIWIGI FLGTILLLQKSKSSIKSILPWVLTGIFFLLMSFLLFYHSNWLFQRAIDDLFAKRSLENQRIWIHKMNYSILKENLVFGIG GGNYENRFIDIAIPIVNEIPALYYDLSITPKSHAHFDVLHDLILGGLFAFLFYLGFLWSITKQIDTTNRKYVFYLGIPIV LFAGSFQCYLLDDEVLLPFMGLLALLPILKFTPKNEFQSKPNESLFQTLFQNLKIETLSFSFGLILFWIFFSLTVTYLWS RTENAELVLHRTRTNQNFPSPLSQLSVNAKSPIPLPVPTKQMYFKLSGCLDQVLNFRKDPSPRLKPIQLEILWDKEVETN LPNRLTVEIRKRESFDQDKEYRVQKESVVKTFAVPLNRKDVQIVVDPREFVTETPAFVDFGFWYEWDSVSPHLPRLRILG NCD >Mature_643_residues MEPNMIGKETFHKISFVFLAFFFALSPISISLSQIFAGLSLFFLFLDQMKKRKLPQIPIALIFWTGLYLSFLLTPLIENQ TIQWKKDIVKSEFGDLWMGFLLLHQTYLKDREKKRIQNFVFLGAIILILSGTISLFFPYRLAPFVMDGLRHIEGKRLPHL LANVHGISVYLPIGFQSTHLTYGGLLAVYLPSLWEKSYRLLSKKKRMIQFWKTSLLTLSVSGFGMVLLLLNQSRSIWIGI FLGTILLLQKSKSSIKSILPWVLTGIFFLLMSFLLFYHSNWLFQRAIDDLFAKRSLENQRIWIHKMNYSILKENLVFGIG GGNYENRFIDIAIPIVNEIPALYYDLSITPKSHAHFDVLHDLILGGLFAFLFYLGFLWSITKQIDTTNRKYVFYLGIPIV LFAGSFQCYLLDDEVLLPFMGLLALLPILKFTPKNEFQSKPNESLFQTLFQNLKIETLSFSFGLILFWIFFSLTVTYLWS RTENAELVLHRTRTNQNFPSPLSQLSVNAKSPIPLPVPTKQMYFKLSGCLDQVLNFRKDPSPRLKPIQLEILWDKEVETN LPNRLTVEIRKRESFDQDKEYRVQKESVVKTFAVPLNRKDVQIVVDPREFVTETPAFVDFGFWYEWDSVSPHLPRLRILG NCD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74738; Mature: 74738
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPNMIGKETFHKISFVFLAFFFALSPISISLSQIFAGLSLFFLFLDQMKKRKLPQIPIA CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LIFWTGLYLSFLLTPLIENQTIQWKKDIVKSEFGDLWMGFLLLHQTYLKDREKKRIQNFV HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLGAIILILSGTISLFFPYRLAPFVMDGLRHIEGKRLPHLLANVHGISVYLPIGFQSTHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCCCC TYGGLLAVYLPSLWEKSYRLLSKKKRMIQFWKTSLLTLSVSGFGMVLLLLNQSRSIWIGI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHEEEEEECCCCCEEHHH FLGTILLLQKSKSSIKSILPWVLTGIFFLLMSFLLFYHSNWLFQRAIDDLFAKRSLENQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCE IWIHKMNYSILKENLVFGIGGGNYENRFIDIAIPIVNEIPALYYDLSITPKSHAHFDVLH EEEEECCHHHHHCCEEEEECCCCCCCEEEEEEECHHHCCCCEEEEEEECCCCCCHHHHHH DLILGGLFAFLFYLGFLWSITKQIDTTNRKYVFYLGIPIVLFAGSFQCYLLDDEVLLPFM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCEEEEEECCHHHHHHH GLLALLPILKFTPKNEFQSKPNESLFQTLFQNLKIETLSFSFGLILFWIFFSLTVTYLWS HHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHC RTENAELVLHRTRTNQNFPSPLSQLSVNAKSPIPLPVPTKQMYFKLSGCLDQVLNFRKDP CCCCCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC SPRLKPIQLEILWDKEVETNLPNRLTVEIRKRESFDQDKEYRVQKESVVKTFAVPLNRKD CCCCCEEEEEEEECCCHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC VQIVVDPREFVTETPAFVDFGFWYEWDSVSPHLPRLRILGNCD EEEEECCHHHHHCCCCCEEECCEEECCCCCCCCCCEEECCCCC >Mature Secondary Structure MEPNMIGKETFHKISFVFLAFFFALSPISISLSQIFAGLSLFFLFLDQMKKRKLPQIPIA CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LIFWTGLYLSFLLTPLIENQTIQWKKDIVKSEFGDLWMGFLLLHQTYLKDREKKRIQNFV HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLGAIILILSGTISLFFPYRLAPFVMDGLRHIEGKRLPHLLANVHGISVYLPIGFQSTHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCCCC TYGGLLAVYLPSLWEKSYRLLSKKKRMIQFWKTSLLTLSVSGFGMVLLLLNQSRSIWIGI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHEEEEEECCCCCEEHHH FLGTILLLQKSKSSIKSILPWVLTGIFFLLMSFLLFYHSNWLFQRAIDDLFAKRSLENQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCE IWIHKMNYSILKENLVFGIGGGNYENRFIDIAIPIVNEIPALYYDLSITPKSHAHFDVLH EEEEECCHHHHHCCEEEEECCCCCCCEEEEEEECHHHCCCCEEEEEEECCCCCCHHHHHH DLILGGLFAFLFYLGFLWSITKQIDTTNRKYVFYLGIPIVLFAGSFQCYLLDDEVLLPFM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCEEEEEECCHHHHHHH GLLALLPILKFTPKNEFQSKPNESLFQTLFQNLKIETLSFSFGLILFWIFFSLTVTYLWS HHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHC RTENAELVLHRTRTNQNFPSPLSQLSVNAKSPIPLPVPTKQMYFKLSGCLDQVLNFRKDP CCCCCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC SPRLKPIQLEILWDKEVETNLPNRLTVEIRKRESFDQDKEYRVQKESVVKTFAVPLNRKD CCCCCEEEEEEEECCCHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC VQIVVDPREFVTETPAFVDFGFWYEWDSVSPHLPRLRILGNCD EEEEECCHHHHHCCCCCEEECCEEECCCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA