| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220988
Identifier: 183220988
GI number: 183220988
Start: 1677234
End: 1677737
Strand: Direct
Name: 183220988
Synonym: LEPBI_I1601
Alternate gene names: NA
Gene position: 1677234-1677737 (Clockwise)
Preceding gene: 183220987
Following gene: 183220992
Centisome position: 46.59
GC content: 46.43
Gene sequence:
>504_bases TTGGTACCTCTTTTTGTTTTGCCGCAAAAACTGGATATGTCACGTAAACATGACCAAACAAATTTCCAAAAATTCTCCCA AAAAAGACGTTTTGAAGAGGAAGACGAGGAAATCCAATTCTCCTCGAATCAAAGTAAATCGCATCGTTACCGGTCCGATA CGGAAGAGTTCCGTTGTGTGGAATGCAAACAGATGGTCTTCCCTCCAGGCTATGGAACAGACCAGAGGAACCATTGTCCC AATTGCCTGACAAGCCTCCACTTGGACAATACGCCAGGTGACCGAAAGGCAACCTGTGGCAGTAAAATGGAAGCCATTTC GATTTGGGTGAGAAAAGGGGAATGGGTGATTTTGCACCGTTGTAAGGGTTGCGGGGTCATCCATGCCAATCGGATTGGTC CGGATGATAATGAAGCATTACTTTTGTCACTCGCAGCCCAAGCCATGGCCAAACCAAGTTTTCGATTGTTTGTAGAAAGT CCGGTGGGAGATCCACCGGATTAG
Upstream 100 bases:
>100_bases AGACCGCCTAAACGGTGAACTTGTTTTGGATACCCCGCCTAAATTTTATTAGGAGGCGGCTATCTCTTCGCAGGCGGTCT ATTCCCACTCATCCACTGTT
Downstream 100 bases:
>100_bases ATTGGTTAGGCGAAAATTTATGCCTTCGGTTTTTTAGACTCTGTTAGGTTGGCAATGAGGGTTGGTAAATTCATAACATC CGCTGGGATGAGAATTTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MVPLFVLPQKLDMSRKHDQTNFQKFSQKRRFEEEDEEIQFSSNQSKSHRYRSDTEEFRCVECKQMVFPPGYGTDQRNHCP NCLTSLHLDNTPGDRKATCGSKMEAISIWVRKGEWVILHRCKGCGVIHANRIGPDDNEALLLSLAAQAMAKPSFRLFVES PVGDPPD
Sequences:
>Translated_167_residues MVPLFVLPQKLDMSRKHDQTNFQKFSQKRRFEEEDEEIQFSSNQSKSHRYRSDTEEFRCVECKQMVFPPGYGTDQRNHCP NCLTSLHLDNTPGDRKATCGSKMEAISIWVRKGEWVILHRCKGCGVIHANRIGPDDNEALLLSLAAQAMAKPSFRLFVES PVGDPPD >Mature_167_residues MVPLFVLPQKLDMSRKHDQTNFQKFSQKRRFEEEDEEIQFSSNQSKSHRYRSDTEEFRCVECKQMVFPPGYGTDQRNHCP NCLTSLHLDNTPGDRKATCGSKMEAISIWVRKGEWVILHRCKGCGVIHANRIGPDDNEALLLSLAAQAMAKPSFRLFVES PVGDPPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19112; Mature: 19112
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPLFVLPQKLDMSRKHDQTNFQKFSQKRRFEEEDEEIQFSSNQSKSHRYRSDTEEFRCV CCCEEECCCHHCCCHHCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHCCCCCHHHHHH ECKQMVFPPGYGTDQRNHCPNCLTSLHLDNTPGDRKATCGSKMEAISIWVRKGEWVILHR HHHHHCCCCCCCCCCCCCCCHHHHHEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEE CKGCGVIHANRIGPDDNEALLLSLAAQAMAKPSFRLFVESPVGDPPD CCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCC >Mature Secondary Structure MVPLFVLPQKLDMSRKHDQTNFQKFSQKRRFEEEDEEIQFSSNQSKSHRYRSDTEEFRCV CCCEEECCCHHCCCHHCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHCCCCCHHHHHH ECKQMVFPPGYGTDQRNHCPNCLTSLHLDNTPGDRKATCGSKMEAISIWVRKGEWVILHR HHHHHCCCCCCCCCCCCCCCHHHHHEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEE CKGCGVIHANRIGPDDNEALLLSLAAQAMAKPSFRLFVESPVGDPPD CCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA