| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183220984
Identifier: 183220984
GI number: 183220984
Start: 1673774
End: 1674607
Strand: Reverse
Name: 183220984
Synonym: LEPBI_I1597
Alternate gene names: NA
Gene position: 1674607-1673774 (Counterclockwise)
Preceding gene: 183220985
Following gene: 183220983
Centisome position: 46.52
GC content: 35.13
Gene sequence:
>834_bases ATGAAAATAAAATTAATTCTCCCCATTTTACTACTTAGCATTGGGGTTTTCGCTCAAACTGGTAGCTCGGAAACTGGCTC TACTTCTGCTGGAATCGATCCTTCTCAATCAGGGAAATCGATGGCAGATACAGAAAAAGAACTCGATGACAATATCTCTG AAGTGAACAAACGCCTTCGCTTACATACTGTACTTTTTAAAATGAAAGTAAGAACCCTTCCGCACAAAACTGTCCTTTAC AAAGGAAAACCAAGTGCCGATGGGGAGCGTTGTGAAGCTGCAGACAAACAAGAAGCACAAGACAATACTTGTTTGCACCT GGAAGTGTTTGATTTCGTAGGAAGTGAAGATGGAAAGTCTTCTAAAAACTTAGGTGCAAAATTCAAAAAGATGGAACTCT TTTTTGAAGGATCGAATAACGCAGATCCAGACCCAAGAAAAGAACAACCACGTAACTTAACAAAAATTAGAACTTACATT TACCAAAACAATTTTCTATTAGAAGACAAAGTGATTTCTGTTATTGCTGACGTGGCTCCGAATGGAGAACCAGCACATAA TGATAAAATTGAACTCTTTTACCAACATGATGATTACCCAGTATGGGGAACTCCAGAAACACCTTCTGAAAAAGGAGTTG GAAAGTACATTTTATCAAATGTTGAAAATACAAAATCGAATCCAATTCGAAACAATTTCAAAAAACAATTCTATTTCAAA AACTTAGATTATTTTGATAAATTGTTCACAAAAATCTTTGATTATAATGACCGTGATTCCAACAAACATTATAAAAAGAA CGTAGAAGCATTGAAAGGTTCTTTGAAATACTAA
Upstream 100 bases:
>100_bases TCTTCCCGAGGATTTTACCGATACTTTTTACAGGATATTTGTTTACGCCCATGGGTCGTACTTTGGTATCCTCAAATTAA CCTTTTAGGAAGATTCGGAC
Downstream 100 bases:
>100_bases GAACATTACAGGTTCTTAATTGAATCGCGTTAAACAATGTCCGAATTGTTCCACGATGTTACGGTTCCCTGATACTCAGG GAACCATCTTGGTCCAATGC
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MKIKLILPILLLSIGVFAQTGSSETGSTSAGIDPSQSGKSMADTEKELDDNISEVNKRLRLHTVLFKMKVRTLPHKTVLY KGKPSADGERCEAADKQEAQDNTCLHLEVFDFVGSEDGKSSKNLGAKFKKMELFFEGSNNADPDPRKEQPRNLTKIRTYI YQNNFLLEDKVISVIADVAPNGEPAHNDKIELFYQHDDYPVWGTPETPSEKGVGKYILSNVENTKSNPIRNNFKKQFYFK NLDYFDKLFTKIFDYNDRDSNKHYKKNVEALKGSLKY
Sequences:
>Translated_277_residues MKIKLILPILLLSIGVFAQTGSSETGSTSAGIDPSQSGKSMADTEKELDDNISEVNKRLRLHTVLFKMKVRTLPHKTVLY KGKPSADGERCEAADKQEAQDNTCLHLEVFDFVGSEDGKSSKNLGAKFKKMELFFEGSNNADPDPRKEQPRNLTKIRTYI YQNNFLLEDKVISVIADVAPNGEPAHNDKIELFYQHDDYPVWGTPETPSEKGVGKYILSNVENTKSNPIRNNFKKQFYFK NLDYFDKLFTKIFDYNDRDSNKHYKKNVEALKGSLKY >Mature_277_residues MKIKLILPILLLSIGVFAQTGSSETGSTSAGIDPSQSGKSMADTEKELDDNISEVNKRLRLHTVLFKMKVRTLPHKTVLY KGKPSADGERCEAADKQEAQDNTCLHLEVFDFVGSEDGKSSKNLGAKFKKMELFFEGSNNADPDPRKEQPRNLTKIRTYI YQNNFLLEDKVISVIADVAPNGEPAHNDKIELFYQHDDYPVWGTPETPSEKGVGKYILSNVENTKSNPIRNNFKKQFYFK NLDYFDKLFTKIFDYNDRDSNKHYKKNVEALKGSLKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31518; Mature: 31518
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKLILPILLLSIGVFAQTGSSETGSTSAGIDPSQSGKSMADTEKELDDNISEVNKRLR CEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHH LHTVLFKMKVRTLPHKTVLYKGKPSADGERCEAADKQEAQDNTCLHLEVFDFVGSEDGKS HHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHCCHHHCCCCCEEEEEEHHHHCCCCCCC SKNLGAKFKKMELFFEGSNNADPDPRKEQPRNLTKIRTYIYQNNFLLEDKVISVIADVAP CHHHCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHCC NGEPAHNDKIELFYQHDDYPVWGTPETPSEKGVGKYILSNVENTKSNPIRNNFKKQFYFK CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHC NLDYFDKLFTKIFDYNDRDSNKHYKKNVEALKGSLKY CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKIKLILPILLLSIGVFAQTGSSETGSTSAGIDPSQSGKSMADTEKELDDNISEVNKRLR CEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHH LHTVLFKMKVRTLPHKTVLYKGKPSADGERCEAADKQEAQDNTCLHLEVFDFVGSEDGKS HHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHCCHHHCCCCCEEEEEEHHHHCCCCCCC SKNLGAKFKKMELFFEGSNNADPDPRKEQPRNLTKIRTYIYQNNFLLEDKVISVIADVAP CHHHCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHCC NGEPAHNDKIELFYQHDDYPVWGTPETPSEKGVGKYILSNVENTKSNPIRNNFKKQFYFK CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHC NLDYFDKLFTKIFDYNDRDSNKHYKKNVEALKGSLKY CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA