| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is acoA [H]
Identifier: 183220946
GI number: 183220946
Start: 1626525
End: 1627493
Strand: Reverse
Name: acoA [H]
Synonym: LEPBI_I1559
Alternate gene names: 183220946
Gene position: 1627493-1626525 (Counterclockwise)
Preceding gene: 183220948
Following gene: 183220945
Centisome position: 45.21
GC content: 47.06
Gene sequence:
>969_bases TTGGTTTCTTCTATTCCCAAAGACTCACACTCTGTGAGCGAGTTAAAAGAGTTCTACAGACAGATGGTACTGATACGTAA GTTTGAAGAAGCTGCCGCAAAAGCCTATAGTGTTGGAAAAATCGGTGGATTCCTCCATTTATACATCGGGCAAGAGGCTG TGGGTGTTGGATCGATCGCTGCCCTCACCCCTCACGACTATATCGTATCTACCTACCGTGACCACGGACATGCATTGGCA CGTGGTTTACATCCAAATCCTCTGATGGCAGAACTTTTTGGAAAGGCAACGGGAATCTCCAAAGGGAACGGTGGGTCCAT GCATTTTTTTGATAAAAATGCCCATTTTATGGGAGGGCACATCTCACTTGCGGCAGGCATCGCCTTTGCTTCCAAATACA AAAAGGAAGATTCCGTTACCATTTGTTTTTTTGGAGAAGGTGCGGCCAATATCGGATCCTTTCACGAAGGACTAAACCTC GCCGCCATTTGGAAACTCCCCGTCGTTTTTATCTGCGAAAACAACCATTATGCGATGGGAACCCCGGAATACCGTGCCCT TGCTGTCAAGGATGTCTCCATCAGAGCCCACGCTTATGATATGGCAAGAGACCATATTGAAGGGGATGAAGTCCGAAAAG TGCGAGACCATGTGAAAGTGGCAGTGGAACGTGCACGGCGCGGCGAAGGACCTACTCTCATCGAAGTCTCAACTTACCGC TTTCGTGGGCATTCGATGTCAGACCCTGCCAAGTATCGAACCAAAGAAGAATTAGAAGCTTATAAAAAAAAGGATCCACT GATGCGGGCAAGACACGAACTTGAGTTAGGTGGGATAAAACCAAATGAGTTAGACAAACTCGAAACTGATATCCAAACAC AAATTGATGAGGCCTACCAGTTTGCGGAAACCTCACCAGAGCCCCCTCTCTCCCAACTGCACAAGTATGTGTATGCGGAG GATAAATAA
Upstream 100 bases:
>100_bases GTCCTAGGGAAACTGTCTTTTATGTTCTTTTAAGAGCAAGATTTTTGCTTTCTTTCTTTGTCTAAATAGTGTAGTTTTTT AGTCGTTTTGGAGGTTCTAT
Downstream 100 bases:
>100_bases ATGGCCATTTTAACCTACAGAGAGGCACTGAACAGAGCCATGATCGAAGAGATGAAGCAAGACCCTCTTATCTATTTAAT GGGAGAAGAAGTGGGTCATT
Product: pyruvate dehydrogenase E1 subunit alpha
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MVSSIPKDSHSVSELKEFYRQMVLIRKFEEAAAKAYSVGKIGGFLHLYIGQEAVGVGSIAALTPHDYIVSTYRDHGHALA RGLHPNPLMAELFGKATGISKGNGGSMHFFDKNAHFMGGHISLAAGIAFASKYKKEDSVTICFFGEGAANIGSFHEGLNL AAIWKLPVVFICENNHYAMGTPEYRALAVKDVSIRAHAYDMARDHIEGDEVRKVRDHVKVAVERARRGEGPTLIEVSTYR FRGHSMSDPAKYRTKEELEAYKKKDPLMRARHELELGGIKPNELDKLETDIQTQIDEAYQFAETSPEPPLSQLHKYVYAE DK
Sequences:
>Translated_322_residues MVSSIPKDSHSVSELKEFYRQMVLIRKFEEAAAKAYSVGKIGGFLHLYIGQEAVGVGSIAALTPHDYIVSTYRDHGHALA RGLHPNPLMAELFGKATGISKGNGGSMHFFDKNAHFMGGHISLAAGIAFASKYKKEDSVTICFFGEGAANIGSFHEGLNL AAIWKLPVVFICENNHYAMGTPEYRALAVKDVSIRAHAYDMARDHIEGDEVRKVRDHVKVAVERARRGEGPTLIEVSTYR FRGHSMSDPAKYRTKEELEAYKKKDPLMRARHELELGGIKPNELDKLETDIQTQIDEAYQFAETSPEPPLSQLHKYVYAE DK >Mature_322_residues MVSSIPKDSHSVSELKEFYRQMVLIRKFEEAAAKAYSVGKIGGFLHLYIGQEAVGVGSIAALTPHDYIVSTYRDHGHALA RGLHPNPLMAELFGKATGISKGNGGSMHFFDKNAHFMGGHISLAAGIAFASKYKKEDSVTICFFGEGAANIGSFHEGLNL AAIWKLPVVFICENNHYAMGTPEYRALAVKDVSIRAHAYDMARDHIEGDEVRKVRDHVKVAVERARRGEGPTLIEVSTYR FRGHSMSDPAKYRTKEELEAYKKKDPLMRARHELELGGIKPNELDKLETDIQTQIDEAYQFAETSPEPPLSQLHKYVYAE DK
Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge
COG id: COG1071
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4885543, Length=314, Percent_Identity=41.7197452229299, Blast_Score=244, Evalue=6e-65, Organism=Homo sapiens, GI291084742, Length=312, Percent_Identity=41.025641025641, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI4505685, Length=312, Percent_Identity=41.025641025641, Blast_Score=228, Evalue=5e-60, Organism=Homo sapiens, GI291084744, Length=319, Percent_Identity=40.1253918495298, Blast_Score=221, Evalue=5e-58, Organism=Homo sapiens, GI291084757, Length=308, Percent_Identity=38.3116883116883, Blast_Score=188, Evalue=5e-48, Organism=Homo sapiens, GI11386135, Length=324, Percent_Identity=32.0987654320988, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI258645172, Length=316, Percent_Identity=32.9113924050633, Blast_Score=144, Evalue=7e-35, Organism=Caenorhabditis elegans, GI32564172, Length=309, Percent_Identity=37.2168284789644, Blast_Score=214, Evalue=6e-56, Organism=Caenorhabditis elegans, GI17536047, Length=309, Percent_Identity=37.2168284789644, Blast_Score=214, Evalue=7e-56, Organism=Caenorhabditis elegans, GI86563355, Length=262, Percent_Identity=31.6793893129771, Blast_Score=128, Evalue=4e-30, Organism=Caenorhabditis elegans, GI86563357, Length=262, Percent_Identity=31.6793893129771, Blast_Score=128, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6321026, Length=319, Percent_Identity=37.3040752351097, Blast_Score=213, Evalue=3e-56, Organism=Drosophila melanogaster, GI24639744, Length=312, Percent_Identity=39.1025641025641, Blast_Score=223, Evalue=1e-58, Organism=Drosophila melanogaster, GI28571106, Length=312, Percent_Identity=39.1025641025641, Blast_Score=223, Evalue=1e-58, Organism=Drosophila melanogaster, GI24639740, Length=312, Percent_Identity=39.1025641025641, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24639748, Length=311, Percent_Identity=38.9067524115756, Blast_Score=221, Evalue=4e-58, Organism=Drosophila melanogaster, GI24639746, Length=307, Percent_Identity=39.0879478827362, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI21355903, Length=317, Percent_Identity=26.1829652996845, Blast_Score=120, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001017 - InterPro: IPR017597 [H]
Pfam domain/function: PF00676 E1_dh [H]
EC number: =1.2.4.1 [H]
Molecular weight: Translated: 35881; Mature: 35881
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSSIPKDSHSVSELKEFYRQMVLIRKFEEAAAKAYSVGKIGGFLHLYIGQEAVGVGSIA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEE ALTPHDYIVSTYRDHGHALARGLHPNPLMAELFGKATGISKGNGGSMHFFDKNAHFMGGH EECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCEEECCH ISLAAGIAFASKYKKEDSVTICFFGEGAANIGSFHEGLNLAAIWKLPVVFICENNHYAMG HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHCCCEEEEEECCEEEEECCCEEECC TPEYRALAVKDVSIRAHAYDMARDHIEGDEVRKVRDHVKVAVERARRGEGPTLIEVSTYR CCCCEEEEEEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE FRGHSMSDPAKYRTKEELEAYKKKDPLMRARHELELGGIKPNELDKLETDIQTQIDEAYQ ECCCCCCCCHHHCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH FAETSPEPPLSQLHKYVYAEDK HHCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MVSSIPKDSHSVSELKEFYRQMVLIRKFEEAAAKAYSVGKIGGFLHLYIGQEAVGVGSIA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEE ALTPHDYIVSTYRDHGHALARGLHPNPLMAELFGKATGISKGNGGSMHFFDKNAHFMGGH EECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCEEECCH ISLAAGIAFASKYKKEDSVTICFFGEGAANIGSFHEGLNLAAIWKLPVVFICENNHYAMG HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHCCCEEEEEECCEEEEECCCEEECC TPEYRALAVKDVSIRAHAYDMARDHIEGDEVRKVRDHVKVAVERARRGEGPTLIEVSTYR CCCCEEEEEEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE FRGHSMSDPAKYRTKEELEAYKKKDPLMRARHELELGGIKPNELDKLETDIQTQIDEAYQ ECCCCCCCCHHHCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH FAETSPEPPLSQLHKYVYAEDK HHCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9515924 [H]