| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220847
Identifier: 183220847
GI number: 183220847
Start: 1522895
End: 1524076
Strand: Direct
Name: 183220847
Synonym: LEPBI_I1460
Alternate gene names: NA
Gene position: 1522895-1524076 (Clockwise)
Preceding gene: 183220844
Following gene: 183220850
Centisome position: 42.31
GC content: 38.49
Gene sequence:
>1182_bases ATGAAAGCATCGAAACTAACCATCATAGGACTTGCGATTCTTTTCACTGGACTTACAGTTTGTAAGAAACCAGATGCAGA AGTAACGGAAGCACCTAAAAAACCAGCAGACTTGTCTGCGGTTGTCGTATTTGCGGTAGGAGATTCAAAAATCCAACACG CAGACCAAACGGAAGAAAAAGCACAACTTGGTTCTCTTCTGAAAACAGGGGATAATGTAGTCACAGGCGACAATGGAAAA GTAGACATCCAATTTGCAGATGGCTCGAGCATTCGTATCTCTCCAAAGTCCGCGATTGACTTTGCAAGACTATCACAAGA CAATGCAGGAACAACAGACACTCAAATTGCTCTCGTTTCTGGAAAGGTTTTTGCGAAAGTCAACAAAGCTAAGAAAGAAG ACAACTTTACTGTCGTGACACCAACTGCGATTGCGGGTGTGCGAGGAACGTCTTTTATCGTAGAATCAGCTGAAGGAAAA CCTGCGAAAGTGAAAGTAGTGGAAGGATCCGTTGCATTTGCTCCGCGTGTTCCCGCTCTTGAAAAACTTTCTGAAGAAGA AATTTCTAAGAATGGTGATCTTAAAAAACTACAAGAGTCCATTGCAAAAGCAGAAGTCATCTTAGAAAAAGACCAAGCTT CGACTCAATCTGCAAAATCTGCAGAACTTGCGAAATCAGCAGACATCCAATCTTTGGATTTGTCAAAAGCGTTTAAAACT TCTGAGAAAGAAAAACTCGTAGTTGAAAGTGCGAAATTGACTAAAAACGAAGAACAAGAAATCAAAACGATCGTGACTGT TGACAAACAAACAGCACAAGAGATTGTAAAACTTAGTGAATCAGCACAAACTGAGAAACTCGATGAATTGAAAAAACAAG AAATCGATACTAAGAAACATGAGATCGAAAAAGAAGTAGCGAAACGACAAGAAGAAGAGAAGAAAAAATTCGAAGATTCT TTAGCGAGCCAACCAAAAGATTTCAAATCTAAAAAAGACATTGTAAACTACTACGAAAGAATCGAAAAAATCGTGTTAGT TGACGGAAAAACAGTGATTGGTGCGATCATCAACCAAGAAAATGGTCAACTGATTGTTCACACTGAAAATGGTGTTAAAA AAATTGATATGGACAATGTAGAAGAAGTCATTTACGACCTTCAACAAAAATCCAAATTCTAA
Upstream 100 bases:
>100_bases TCATTCTAGAAAAAAATACAAAAAAGCTGGGAATTTTCTATGTCTCAGTTTGTTGATTAGAGAGTAAGGAAATTAGAATT TCACTAAGGGACAGGAAGAT
Downstream 100 bases:
>100_bases AACAACCACACCCTTAAGTAGAAAAGAAGCCTGGAGGAATTCCCTCTGGGCTTTTTTTATGTACGGTTCGTTTTGTATTC GTTCCAGAGAATGCGTATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MKASKLTIIGLAILFTGLTVCKKPDAEVTEAPKKPADLSAVVVFAVGDSKIQHADQTEEKAQLGSLLKTGDNVVTGDNGK VDIQFADGSSIRISPKSAIDFARLSQDNAGTTDTQIALVSGKVFAKVNKAKKEDNFTVVTPTAIAGVRGTSFIVESAEGK PAKVKVVEGSVAFAPRVPALEKLSEEEISKNGDLKKLQESIAKAEVILEKDQASTQSAKSAELAKSADIQSLDLSKAFKT SEKEKLVVESAKLTKNEEQEIKTIVTVDKQTAQEIVKLSESAQTEKLDELKKQEIDTKKHEIEKEVAKRQEEEKKKFEDS LASQPKDFKSKKDIVNYYERIEKIVLVDGKTVIGAIINQENGQLIVHTENGVKKIDMDNVEEVIYDLQQKSKF
Sequences:
>Translated_393_residues MKASKLTIIGLAILFTGLTVCKKPDAEVTEAPKKPADLSAVVVFAVGDSKIQHADQTEEKAQLGSLLKTGDNVVTGDNGK VDIQFADGSSIRISPKSAIDFARLSQDNAGTTDTQIALVSGKVFAKVNKAKKEDNFTVVTPTAIAGVRGTSFIVESAEGK PAKVKVVEGSVAFAPRVPALEKLSEEEISKNGDLKKLQESIAKAEVILEKDQASTQSAKSAELAKSADIQSLDLSKAFKT SEKEKLVVESAKLTKNEEQEIKTIVTVDKQTAQEIVKLSESAQTEKLDELKKQEIDTKKHEIEKEVAKRQEEEKKKFEDS LASQPKDFKSKKDIVNYYERIEKIVLVDGKTVIGAIINQENGQLIVHTENGVKKIDMDNVEEVIYDLQQKSKF >Mature_393_residues MKASKLTIIGLAILFTGLTVCKKPDAEVTEAPKKPADLSAVVVFAVGDSKIQHADQTEEKAQLGSLLKTGDNVVTGDNGK VDIQFADGSSIRISPKSAIDFARLSQDNAGTTDTQIALVSGKVFAKVNKAKKEDNFTVVTPTAIAGVRGTSFIVESAEGK PAKVKVVEGSVAFAPRVPALEKLSEEEISKNGDLKKLQESIAKAEVILEKDQASTQSAKSAELAKSADIQSLDLSKAFKT SEKEKLVVESAKLTKNEEQEIKTIVTVDKQTAQEIVKLSESAQTEKLDELKKQEIDTKKHEIEKEVAKRQEEEKKKFEDS LASQPKDFKSKKDIVNYYERIEKIVLVDGKTVIGAIINQENGQLIVHTENGVKKIDMDNVEEVIYDLQQKSKF
Specific function: Unknown
COG id: COG4254
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42915; Mature: 42915
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKASKLTIIGLAILFTGLTVCKKPDAEVTEAPKKPADLSAVVVFAVGDSKIQHADQTEEK CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEEEEECCCHHHCCCCHHHH AQLGSLLKTGDNVVTGDNGKVDIQFADGSSIRISPKSAIDFARLSQDNAGTTDTQIALVS HHHHHHHHCCCCEEECCCCEEEEEECCCCEEEECCHHHHHHHHHCCCCCCCCCCEEEEEC GKVFAKVNKAKKEDNFTVVTPTAIAGVRGTSFIVESAEGKPAKVKVVEGSVAFAPRVPAL CHHHHHHHHHCCCCCEEEECCHHHHCCCCCEEEEECCCCCCEEEEEEECCEEECCCCCHH EKLSEEEISKNGDLKKLQESIAKAEVILEKDQASTQSAKSAELAKSADIQSLDLSKAFKT HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCC SEKEKLVVESAKLTKNEEQEIKTIVTVDKQTAQEIVKLSESAQTEKLDELKKQEIDTKKH CCHHHHHHHHHHHCCCHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH EIEKEVAKRQEEEKKKFEDSLASQPKDFKSKKDIVNYYERIEKIVLVDGKTVIGAIINQE HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEEECC NGQLIVHTENGVKKIDMDNVEEVIYDLQQKSKF CCEEEEECCCCCEECCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKASKLTIIGLAILFTGLTVCKKPDAEVTEAPKKPADLSAVVVFAVGDSKIQHADQTEEK CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEEEEECCCHHHCCCCHHHH AQLGSLLKTGDNVVTGDNGKVDIQFADGSSIRISPKSAIDFARLSQDNAGTTDTQIALVS HHHHHHHHCCCCEEECCCCEEEEEECCCCEEEECCHHHHHHHHHCCCCCCCCCCEEEEEC GKVFAKVNKAKKEDNFTVVTPTAIAGVRGTSFIVESAEGKPAKVKVVEGSVAFAPRVPAL CHHHHHHHHHCCCCCEEEECCHHHHCCCCCEEEEECCCCCCEEEEEEECCEEECCCCCHH EKLSEEEISKNGDLKKLQESIAKAEVILEKDQASTQSAKSAELAKSADIQSLDLSKAFKT HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCC SEKEKLVVESAKLTKNEEQEIKTIVTVDKQTAQEIVKLSESAQTEKLDELKKQEIDTKKH CCHHHHHHHHHHHCCCHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH EIEKEVAKRQEEEKKKFEDSLASQPKDFKSKKDIVNYYERIEKIVLVDGKTVIGAIINQE HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEEECC NGQLIVHTENGVKKIDMDNVEEVIYDLQQKSKF CCEEEEECCCCCEECCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA