| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is rsbP [H]
Identifier: 183220808
GI number: 183220808
Start: 1482221
End: 1483957
Strand: Direct
Name: rsbP [H]
Synonym: LEPBI_I1420
Alternate gene names: 183220808
Gene position: 1482221-1483957 (Clockwise)
Preceding gene: 183220805
Following gene: 183220812
Centisome position: 41.18
GC content: 38.8
Gene sequence:
>1737_bases ATGAGCTCTCGTAAACCAGACTTTGGTCGTTACCAACATTTAGAGAGTTTTATCCATCTGTCAAAAGATGCCATTTGGTG TTATGAATTGGACGTTCCCATGCCCATTTCCCTCTCCAAAGAAGAACAGATGGAATACATTTGGAATCATTCTGTTGTGA AGGAATGTAATTTGGCCATGGTCAAGTTGTATGGTTTCCATTCCTTGGAACAAGTGTATGGAAAATACTTAAAAGAAATT GTGAATATGGAGAGTGTCTATCTCCTTCGGAAATTCATAGAAAATTCCTATCTATTAGAAGACTTCGAATACAAACAACT CAACACACTTGTCCCAAAAGTTTTCCTCCTCAATTCACATGGGCAAGTGGTAGATGGTCACCTCGTTCGGATTTGGGGAC AACAAATTGAGATTTCCAGTATCAGAGAATCGGAGTCAAAACTTTCTGAGTTACTTCAGTTTTCGCAAATTGTCACTGAA GTTTCCAAGATGTTTGTGCATACCAAAGCAGAATTTGTATCCGATGCCATTCAATTTGCTTTAGAAGAATTAGGAAAGTA TTCCAAAGCAGACAGGGTATTTGTTGCCGAAATTTCATCTGATAAACAATTTTTATCCACAAGCCATGAATGGTTGAATG GTGATGTCCCATCTTTATTTGAAGTCGGCACAAAACTCCCAATTTCCAAAATGAACCCAGAACGATTGGGGGTTCTTGCC GGCGATGGAGTCATCTTCATTCCAGATACAACAGCTTTAAGAGAAGAGTCATGGCACCTTCAATTATTCAAAACCGCCGA AGTTCGTTCCATACTTGTCATTGGATTAAGGGATGAAGGAAACTTGATTGGAATCCTAGGTGTCACAACATACCAATCAT TAGGCGAATGGAACGATGAGACCAAACAGATGTTAGGTCTCGTTGCGAGATTTGTTTCGCAAGGTTTGGTTCGTGCCAAA AACGAAATCAAACTGATGAAAAAAGAAAAAATCCTACAACGGTTCTATTCGGATATTAAGGAAGATATGGCTCTCGCGAA GATGACCCAAGAGGCTTGGGTTGCCAAAGATTTTGGAGCCATTCCCAATCTCAAGATTGAATCTCGATTTTTACCATACG ATGATATTGGTGGAGATTTGATTTTATATGAAAAACCAAATCCCAATTGTATTGATATATTTTTTGGAGATATTTCGGGT CATGGCATTTCCTCTGCACTTGTCTCAGGGATTGCCGCTGTTTCCTTTAAAAAACATTCCTTATTAGAATCCTCGCCTTC TGCCATCTTGGAAGCCATGCATTTGGATTTAAAAACCATTATCTTCAAACACCATATCTCGGCATGTGTGATGAGGATTT ATCCTTTGGAACGTCGGATTGAGTTTAGTTTTGCAGGCCATCCACCCGTTGTCTTTTGGAATGAGAATGACCGGGTGATG AAATTTGTAAAAGATGAAATGTATCCCATTTTACTCCTGGATGTTTGGAAAGGAAAAAATATATCGAAAACCTTTTCCAA AGGAGATCGGCTATTACTCTATTCCGATGGGATTTATGAATTGGAAGAAGAGGCGGGAGGATACATTGGTCTCGATGTAT TTTTGCAAGAGTTATCGGAAATGATTTCCGTTTCCGATGACACAGATAGTCTCATCAAAAAGATGATTGCCAATTGCCTT GTGGAAAAAGACAGAATCATCCATGATGATATTGCTGTTTTGTTTTTAGAATTTTAA
Upstream 100 bases:
>100_bases ATCAGAAAATTTTTGATTCAAAATTGGAAATTTTTCAAAAACCTTTCAATGTATGTTTTTTTTGTGGCAATCAAGGGAAC AAAAGAAACTGTAGAAGGAG
Downstream 100 bases:
>100_bases TTCAATTCGTATGAAATTGTCTGTTTTGTTTTCCCTTTCGGGAACAATTCATTTAGCGGTCGATTAAATCGAGGGCTTTC GCATCAGCTTCTGGGTACTT
Product: putative phosphoserine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 578; Mature: 577
Protein sequence:
>578_residues MSSRKPDFGRYQHLESFIHLSKDAIWCYELDVPMPISLSKEEQMEYIWNHSVVKECNLAMVKLYGFHSLEQVYGKYLKEI VNMESVYLLRKFIENSYLLEDFEYKQLNTLVPKVFLLNSHGQVVDGHLVRIWGQQIEISSIRESESKLSELLQFSQIVTE VSKMFVHTKAEFVSDAIQFALEELGKYSKADRVFVAEISSDKQFLSTSHEWLNGDVPSLFEVGTKLPISKMNPERLGVLA GDGVIFIPDTTALREESWHLQLFKTAEVRSILVIGLRDEGNLIGILGVTTYQSLGEWNDETKQMLGLVARFVSQGLVRAK NEIKLMKKEKILQRFYSDIKEDMALAKMTQEAWVAKDFGAIPNLKIESRFLPYDDIGGDLILYEKPNPNCIDIFFGDISG HGISSALVSGIAAVSFKKHSLLESSPSAILEAMHLDLKTIIFKHHISACVMRIYPLERRIEFSFAGHPPVVFWNENDRVM KFVKDEMYPILLLDVWKGKNISKTFSKGDRLLLYSDGIYELEEEAGGYIGLDVFLQELSEMISVSDDTDSLIKKMIANCL VEKDRIIHDDIAVLFLEF
Sequences:
>Translated_578_residues MSSRKPDFGRYQHLESFIHLSKDAIWCYELDVPMPISLSKEEQMEYIWNHSVVKECNLAMVKLYGFHSLEQVYGKYLKEI VNMESVYLLRKFIENSYLLEDFEYKQLNTLVPKVFLLNSHGQVVDGHLVRIWGQQIEISSIRESESKLSELLQFSQIVTE VSKMFVHTKAEFVSDAIQFALEELGKYSKADRVFVAEISSDKQFLSTSHEWLNGDVPSLFEVGTKLPISKMNPERLGVLA GDGVIFIPDTTALREESWHLQLFKTAEVRSILVIGLRDEGNLIGILGVTTYQSLGEWNDETKQMLGLVARFVSQGLVRAK NEIKLMKKEKILQRFYSDIKEDMALAKMTQEAWVAKDFGAIPNLKIESRFLPYDDIGGDLILYEKPNPNCIDIFFGDISG HGISSALVSGIAAVSFKKHSLLESSPSAILEAMHLDLKTIIFKHHISACVMRIYPLERRIEFSFAGHPPVVFWNENDRVM KFVKDEMYPILLLDVWKGKNISKTFSKGDRLLLYSDGIYELEEEAGGYIGLDVFLQELSEMISVSDDTDSLIKKMIANCL VEKDRIIHDDIAVLFLEF >Mature_577_residues SSRKPDFGRYQHLESFIHLSKDAIWCYELDVPMPISLSKEEQMEYIWNHSVVKECNLAMVKLYGFHSLEQVYGKYLKEIV NMESVYLLRKFIENSYLLEDFEYKQLNTLVPKVFLLNSHGQVVDGHLVRIWGQQIEISSIRESESKLSELLQFSQIVTEV SKMFVHTKAEFVSDAIQFALEELGKYSKADRVFVAEISSDKQFLSTSHEWLNGDVPSLFEVGTKLPISKMNPERLGVLAG DGVIFIPDTTALREESWHLQLFKTAEVRSILVIGLRDEGNLIGILGVTTYQSLGEWNDETKQMLGLVARFVSQGLVRAKN EIKLMKKEKILQRFYSDIKEDMALAKMTQEAWVAKDFGAIPNLKIESRFLPYDDIGGDLILYEKPNPNCIDIFFGDISGH GISSALVSGIAAVSFKKHSLLESSPSAILEAMHLDLKTIIFKHHISACVMRIYPLERRIEFSFAGHPPVVFWNENDRVMK FVKDEMYPILLLDVWKGKNISKTFSKGDRLLLYSDGIYELEEEAGGYIGLDVFLQELSEMISVSDDTDSLIKKMIANCLV EKDRIIHDDIAVLFLEF
Specific function: Positive regulator of sigma-B activity. Dephosphorylates rsbV in response to energy stress [H]
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR001932 - InterPro: IPR010822 [H]
Pfam domain/function: PF00989 PAS; PF07228 SpoIIE [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 66063; Mature: 65932
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRKPDFGRYQHLESFIHLSKDAIWCYELDVPMPISLSKEEQMEYIWNHSVVKECNLAM CCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHCCCCE VKLYGFHSLEQVYGKYLKEIVNMESVYLLRKFIENSYLLEDFEYKQLNTLVPKVFLLNSH EEHHCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEECCCCHHHHHHHHCEEEEECCC GQVVDGHLVRIWGQQIEISSIRESESKLSELLQFSQIVTEVSKMFVHTKAEFVSDAIQFA CCEECCEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEELGKYSKADRVFVAEISSDKQFLSTSHEWLNGDVPSLFEVGTKLPISKMNPERLGVLA HHHHHCCCCCCEEEEEEECCCHHHHHCCHHHCCCCCCHHHHHCCCCCCCCCCHHHCEEEE GDGVIFIPDTTALREESWHLQLFKTAEVRSILVIGLRDEGNLIGILGVTTYQSLGEWNDE CCCEEEECCCHHHCCCCCEEEEEEHHCEEEEEEEEEECCCCEEEEEEHHHHHHHHCCCHH TKQMLGLVARFVSQGLVRAKNEIKLMKKEKILQRFYSDIKEDMALAKMTQEAWVAKDFGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IPNLKIESRFLPYDDIGGDLILYEKPNPNCIDIFFGDISGHGISSALVSGIAAVSFKKHS CCCCEECCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH LLESSPSAILEAMHLDLKTIIFKHHISACVMRIYPLERRIEFSFAGHPPVVFWNENDRVM HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCHHHH KFVKDEMYPILLLDVWKGKNISKTFSKGDRLLLYSDGIYELEEEAGGYIGLDVFLQELSE HHHHHCCCEEEEEEECCCCCCHHHHCCCCEEEEEECCCHHHHHHCCCEEEHHHHHHHHHH MISVSDDTDSLIKKMIANCLVEKDRIIHDDIAVLFLEF HHCCCCCHHHHHHHHHHHHHHHCCCCHHCCEEEEEEEC >Mature Secondary Structure SSRKPDFGRYQHLESFIHLSKDAIWCYELDVPMPISLSKEEQMEYIWNHSVVKECNLAM CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHCCCCE VKLYGFHSLEQVYGKYLKEIVNMESVYLLRKFIENSYLLEDFEYKQLNTLVPKVFLLNSH EEHHCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEECCCCHHHHHHHHCEEEEECCC GQVVDGHLVRIWGQQIEISSIRESESKLSELLQFSQIVTEVSKMFVHTKAEFVSDAIQFA CCEECCEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEELGKYSKADRVFVAEISSDKQFLSTSHEWLNGDVPSLFEVGTKLPISKMNPERLGVLA HHHHHCCCCCCEEEEEEECCCHHHHHCCHHHCCCCCCHHHHHCCCCCCCCCCHHHCEEEE GDGVIFIPDTTALREESWHLQLFKTAEVRSILVIGLRDEGNLIGILGVTTYQSLGEWNDE CCCEEEECCCHHHCCCCCEEEEEEHHCEEEEEEEEEECCCCEEEEEEHHHHHHHHCCCHH TKQMLGLVARFVSQGLVRAKNEIKLMKKEKILQRFYSDIKEDMALAKMTQEAWVAKDFGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IPNLKIESRFLPYDDIGGDLILYEKPNPNCIDIFFGDISGHGISSALVSGIAAVSFKKHS CCCCEECCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH LLESSPSAILEAMHLDLKTIIFKHHISACVMRIYPLERRIEFSFAGHPPVVFWNENDRVM HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCHHHH KFVKDEMYPILLLDVWKGKNISKTFSKGDRLLLYSDGIYELEEEAGGYIGLDVFLQELSE HHHHHCCCEEEEEEECCCCCCHHHHCCCCEEEEEECCCHHHHHHCCCEEEHHHHHHHHHH MISVSDDTDSLIKKMIANCLVEKDRIIHDDIAVLFLEF HHCCCCCHHHHHHHHHHHHHHHCCCCHHCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 10632888 [H]