Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220615
Identifier: 183220615
GI number: 183220615
Start: 1272340
End: 1273482
Strand: Direct
Name: 183220615
Synonym: LEPBI_I1221
Alternate gene names: NA
Gene position: 1272340-1273482 (Clockwise)
Preceding gene: 183220614
Following gene: 183220620
Centisome position: 35.35
GC content: 40.51
Gene sequence:
>1143_bases TTGGAACGACTGCTTGGCACAAATCCTTTATACTCTTGTACCAAGATGAAAAAACAAATATGCGACCAAATTCATTTTTT TGCCCAGTTTAGTAAATTTATCAATACGATTCTATTCCTTTTGTTTTTTATTTTGAATTGTAACCCCTCCGATTTACAAA ATCCTAGCGACGTTCATAGTCGTGAGTTCAACGAAACTCAAATACTTGCTTGTATTTTGAAAGGTAAGGACTGTTTACCT TGTCCCGGCAATACTTCCTTGTCTTATCCACAAAACACTTACCTGTTAGGTCAAAATTTTCCAGTTTCTATTAAAACAAA TTTATGCGGTCAAATCATATCTTGTAAGGTATCACCGGCTCTGCCAACGGGACTAACGTTACAGAATGAAACATGCGAAA TCAGTGGTTCCCCTACGACTATTTCAAGTTATACGGATTATTCGATCACTGCGACAACGAGTAGTGGGGACACTAATACG AATTTACGAATTGGTGTTGAGATCGGATCACTTGTTCATTTGAGATTTACGAATGGTTCTTTTGAGAATTCAGGAATCCA ACCCTTAACACTAACAGCAGGTGCATCACTTACGATCATTGATGGATCGGAAGGAGACACAAACGGAGCAATCCATCTTA ATAATACAGATATAAGTTCCCAAATTGGGGGAGATAGTATGTTGCCAAGCGGGACCTTACCTAGAACCATTTGTATTTGG TTAAAACCAGATGCTCTCCTTGGATCTGGAGTACAAGAATTGATTTTTAGTTATGGCACACTTTTTAGTAATGCTTGTGG GTTTGGTCTGCAAAATACAGCGGGAGTGACTGGGTTGTATTTTACTCGAGCCAATTTTAGTGCGAAACAAACTTATGCCC CGTCTGCGGGTGTATGGACCCATATCTGTATTGTTTTTGACGGAACCAATTCCTCCTTTTATGTCAATGGAAGTTTTCTC GGGACACCAGCTACAACTGGTTCAGGTGCAGTTGATACGATCTTACAAAGAATTACTTTTGGAAGTTGGGGCGGTGGGTA TCCTTACCACGGCGGCATTGATGGATTTCGTGTTTTTGGCTCGGCTCTCAGCGCCACAGCGGTAAATCAAGTGTATCTTG GGTCACTAGTATTAGGCCCCTAA
Upstream 100 bases:
>100_bases GTTTTTCCTAATTGGAAAAATAGGAAACTTTTATACCATCCTTAGTTTCCTTTTTCCTGGTGTGGAATAAATTTTGATTC ATTAAGTTCTGAAATATATA
Downstream 100 bases:
>100_bases TAGATGTTAGATTTTATTTTCACCACCGGATTGTCTATATTGTACGGGACTCTGACCTGTTGCTTTTTTAAATTCAACAT TGAAAGCAGTTTTGGAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MERLLGTNPLYSCTKMKKQICDQIHFFAQFSKFINTILFLLFFILNCNPSDLQNPSDVHSREFNETQILACILKGKDCLP CPGNTSLSYPQNTYLLGQNFPVSIKTNLCGQIISCKVSPALPTGLTLQNETCEISGSPTTISSYTDYSITATTSSGDTNT NLRIGVEIGSLVHLRFTNGSFENSGIQPLTLTAGASLTIIDGSEGDTNGAIHLNNTDISSQIGGDSMLPSGTLPRTICIW LKPDALLGSGVQELIFSYGTLFSNACGFGLQNTAGVTGLYFTRANFSAKQTYAPSAGVWTHICIVFDGTNSSFYVNGSFL GTPATTGSGAVDTILQRITFGSWGGGYPYHGGIDGFRVFGSALSATAVNQVYLGSLVLGP
Sequences:
>Translated_380_residues MERLLGTNPLYSCTKMKKQICDQIHFFAQFSKFINTILFLLFFILNCNPSDLQNPSDVHSREFNETQILACILKGKDCLP CPGNTSLSYPQNTYLLGQNFPVSIKTNLCGQIISCKVSPALPTGLTLQNETCEISGSPTTISSYTDYSITATTSSGDTNT NLRIGVEIGSLVHLRFTNGSFENSGIQPLTLTAGASLTIIDGSEGDTNGAIHLNNTDISSQIGGDSMLPSGTLPRTICIW LKPDALLGSGVQELIFSYGTLFSNACGFGLQNTAGVTGLYFTRANFSAKQTYAPSAGVWTHICIVFDGTNSSFYVNGSFL GTPATTGSGAVDTILQRITFGSWGGGYPYHGGIDGFRVFGSALSATAVNQVYLGSLVLGP >Mature_380_residues MERLLGTNPLYSCTKMKKQICDQIHFFAQFSKFINTILFLLFFILNCNPSDLQNPSDVHSREFNETQILACILKGKDCLP CPGNTSLSYPQNTYLLGQNFPVSIKTNLCGQIISCKVSPALPTGLTLQNETCEISGSPTTISSYTDYSITATTSSGDTNT NLRIGVEIGSLVHLRFTNGSFENSGIQPLTLTAGASLTIIDGSEGDTNGAIHLNNTDISSQIGGDSMLPSGTLPRTICIW LKPDALLGSGVQELIFSYGTLFSNACGFGLQNTAGVTGLYFTRANFSAKQTYAPSAGVWTHICIVFDGTNSSFYVNGSFL GTPATTGSGAVDTILQRITFGSWGGGYPYHGGIDGFRVFGSALSATAVNQVYLGSLVLGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40449; Mature: 40449
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERLLGTNPLYSCTKMKKQICDQIHFFAQFSKFINTILFLLFFILNCNPSDLQNPSDVHS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHH REFNETQILACILKGKDCLPCPGNTSLSYPQNTYLLGQNFPVSIKTNLCGQIISCKVSPA CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCEEEEEEECCC LPTGLTLQNETCEISGSPTTISSYTDYSITATTSSGDTNTNLRIGVEIGSLVHLRFTNGS CCCCEEECCCEEEECCCCCEEECCCCEEEEEECCCCCCCCEEEEEEEECCEEEEEEECCC FENSGIQPLTLTAGASLTIIDGSEGDTNGAIHLNNTDISSQIGGDSMLPSGTLPRTICIW CCCCCCCEEEEECCCEEEEEECCCCCCCCEEEECCCCCHHHCCCCCCCCCCCCCEEEEEE LKPDALLGSGVQELIFSYGTLFSNACGFGLQNTAGVTGLYFTRANFSAKQTYAPSAGVWT ECCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEE HICIVFDGTNSSFYVNGSFLGTPATTGSGAVDTILQRITFGSWGGGYPYHGGIDGFRVFG EEEEEEECCCCEEEEECEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH SALSATAVNQVYLGSLVLGP HHHHHHHHHHEEEEEEEECC >Mature Secondary Structure MERLLGTNPLYSCTKMKKQICDQIHFFAQFSKFINTILFLLFFILNCNPSDLQNPSDVHS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHH REFNETQILACILKGKDCLPCPGNTSLSYPQNTYLLGQNFPVSIKTNLCGQIISCKVSPA CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCEEEEEEECCC LPTGLTLQNETCEISGSPTTISSYTDYSITATTSSGDTNTNLRIGVEIGSLVHLRFTNGS CCCCEEECCCEEEECCCCCEEECCCCEEEEEECCCCCCCCEEEEEEEECCEEEEEEECCC FENSGIQPLTLTAGASLTIIDGSEGDTNGAIHLNNTDISSQIGGDSMLPSGTLPRTICIW CCCCCCCEEEEECCCEEEEEECCCCCCCCEEEECCCCCHHHCCCCCCCCCCCCCEEEEEE LKPDALLGSGVQELIFSYGTLFSNACGFGLQNTAGVTGLYFTRANFSAKQTYAPSAGVWT ECCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEE HICIVFDGTNSSFYVNGSFLGTPATTGSGAVDTILQRITFGSWGGGYPYHGGIDGFRVFG EEEEEEECCCCEEEEECEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH SALSATAVNQVYLGSLVLGP HHHHHHHHHHEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA