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The map label for this gene is flgD [H]

Identifier: 183220586

GI number: 183220586

Start: 1238866

End: 1239450

Strand: Direct

Name: flgD [H]

Synonym: LEPBI_I1190

Alternate gene names: 183220586

Gene position: 1238866-1239450 (Clockwise)

Preceding gene: 183220585

Following gene: 183220587

Centisome position: 34.42

GC content: 35.56

Gene sequence:

>585_bases
ATGCCAGACGGAATTCAAGATTTATCCACACAAAATTCAACACGAACCAAATACTTTGAAGGGGATAGAAGTTTTAATAT
CCGCAAACATTTGGATCAATTGGAAAAAGAAGAAACAAGTGGTTTGAAAGGGATTGAAATCAGAGAAAAACAAAAAGAGT
TAGGGAAAGATGATTTTTTGAAACTACTCTTAACTCAACTTTCTCACCAAGATCCAACAAACCCAGTGCAAGACAAAGAC
TTCATCGCACAGATGGCACAGTTTTCTTCACTTGAACAGATGAAAAATATATCTTCTGGAATTGCCAGAATGGAATCAAA
ACAAAGTTATTCGGTAGTAGGAAAAATTGTATCGGGTCCAGATTTGGTAACCGGTGAGGATGTCACAGGTCTTGCTGGTG
CCATTCTTTTTGATAACGAAGGAAAAACATACGTTAGAGTGAATGGTCGGATGCTTGATGTTTCTAAAATTAATTTAATC
TCTGATCCAGAGTTGTTAAAATCGGAAACACAATTCCAACGTCCAACTAACATTCCTGAGATTCCTAATAATACATTAAA
AAAACAAGAAGCTTATCAGGATTAA

Upstream 100 bases:

>100_bases
AGGAAGAAGGTTTGGACTTAGAAGGAATTCCTTTGCCACAAGATTCCAAAGTATTAGAATTTTTCGCGTAATTGAAACAT
AAATAAAGATCGAGGACAAT

Downstream 100 bases:

>100_bases
TCAAAAAAGGTCGATAAAAAAAGAGAGGATAGTACGTTATGATGAGATCACTTTATTCCGGTGTTTCCGGATTGAAAAAC
CACCAAGTTAGAATGGATGT

Product: basal-body rod modification protein FlgD

Products: NA

Alternate protein names: ORF 8 [H]

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MPDGIQDLSTQNSTRTKYFEGDRSFNIRKHLDQLEKEETSGLKGIEIREKQKELGKDDFLKLLLTQLSHQDPTNPVQDKD
FIAQMAQFSSLEQMKNISSGIARMESKQSYSVVGKIVSGPDLVTGEDVTGLAGAILFDNEGKTYVRVNGRMLDVSKINLI
SDPELLKSETQFQRPTNIPEIPNNTLKKQEAYQD

Sequences:

>Translated_194_residues
MPDGIQDLSTQNSTRTKYFEGDRSFNIRKHLDQLEKEETSGLKGIEIREKQKELGKDDFLKLLLTQLSHQDPTNPVQDKD
FIAQMAQFSSLEQMKNISSGIARMESKQSYSVVGKIVSGPDLVTGEDVTGLAGAILFDNEGKTYVRVNGRMLDVSKINLI
SDPELLKSETQFQRPTNIPEIPNNTLKKQEAYQD
>Mature_193_residues
PDGIQDLSTQNSTRTKYFEGDRSFNIRKHLDQLEKEETSGLKGIEIREKQKELGKDDFLKLLLTQLSHQDPTNPVQDKDF
IAQMAQFSSLEQMKNISSGIARMESKQSYSVVGKIVSGPDLVTGEDVTGLAGAILFDNEGKTYVRVNGRMLDVSKINLIS
DPELLKSETQFQRPTNIPEIPNNTLKKQEAYQD

Specific function: Required For Flagellar Hook Formation. May Act As A Scaffolding Protein. [C]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgD family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005648 [H]

Pfam domain/function: PF03963 FlgD [H]

EC number: NA

Molecular weight: Translated: 21851; Mature: 21720

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDGIQDLSTQNSTRTKYFEGDRSFNIRKHLDQLEKEETSGLKGIEIREKQKELGKDDFL
CCCCHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHH
KLLLTQLSHQDPTNPVQDKDFIAQMAQFSSLEQMKNISSGIARMESKQSYSVVGKIVSGP
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
DLVTGEDVTGLAGAILFDNEGKTYVRVNGRMLDVSKINLISDPELLKSETQFQRPTNIPE
CCCCCCCCCCCEEEEEECCCCCEEEEECCEEEEHHHCCCCCCHHHHHHHHHHCCCCCCCC
IPNNTLKKQEAYQD
CCCHHHHHHHHCCC
>Mature Secondary Structure 
PDGIQDLSTQNSTRTKYFEGDRSFNIRKHLDQLEKEETSGLKGIEIREKQKELGKDDFL
CCCHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHH
KLLLTQLSHQDPTNPVQDKDFIAQMAQFSSLEQMKNISSGIARMESKQSYSVVGKIVSGP
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
DLVTGEDVTGLAGAILFDNEGKTYVRVNGRMLDVSKINLISDPELLKSETQFQRPTNIPE
CCCCCCCCCCCEEEEEECCCCCEEEEECCEEEEHHHCCCCCCHHHHHHHHHHCCCCCCCC
IPNNTLKKQEAYQD
CCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1828465; 9384377 [H]