Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is fadD2 [C]
Identifier: 183220510
GI number: 183220510
Start: 1157801
End: 1159720
Strand: Direct
Name: fadD2 [C]
Synonym: LEPBI_I1111
Alternate gene names: 183220510
Gene position: 1157801-1159720 (Clockwise)
Preceding gene: 183220503
Following gene: 183220511
Centisome position: 32.16
GC content: 38.75
Gene sequence:
>1920_bases ATGAAAAGGCAAGAACCCATGAATGAGAACTACCAAATCCTGTACCAAGCATTGGAAAGAGTTGCGACTTCCTTCCCAAA CAAAGTTTCCTTTCGGAAACGAAAGTCCGCTACCGAATTTCCTGGGATCAGTTTTGGAGAATTGAAGGAGTTTGTCGACC ACTTGACTTTGGGATTCATCGAGCTCGGAGTGGAAGTTGGTGACCGGATTGGATTTTTTTGCGATGCTTCTGTCAATTGG TTGCGAACAGACCTATCGATTCTCACCGCAGGAGCAGTTGTCGTTCCGAGAGGCACAGACATTGTCCGAGAAGAAATTTT ATACATCTTAAACCATTCGGAAGCAAAGTATTTGGTGGTTCAAAAACCAAAAGACAAAAAAAGAATCGAAGATTTGTTAG GTGAACTTCCTCACTTAAAACAGATTTTTGTTTTGGAGAATGAACAAGGTGAACTCATCTCTGGTCCCGATTCGATTCTT TTCTTGGTCGAAAGAGGTAAATCCATAGGGAAATCTAGTGGACTTCTCAATTTAACAAATCGAATCAAACAAATTGATCC GGATGCTCTTGCCACTCTCATTTATACTTCCGGAACCACAGGGAATCCCAAAGGGGTGATGTTATCTCAAAAAGGTTGGA TCACTGCAATTCAAAATACAATTGTTAGGTTGGATATGAATTCCAATGATAATGCTGTGAGTTTATTGCCACCATGGCAT GCATTCGAAAGAGCGATTGAATATGCAGGAATCTTTCTTGGTTTGGATTTTTTAATTTCCAACATGACCAGTTTAAAAGA CGACCTTCGTGATTTTCGTCCTACAATTTTTCCATCGGTTCCGAGAATCTGGGAATCCGTTTACAATGGGATTATGGCAA AGGTAGCAAAAGAAGGAGGTTTCAAAGAAAAATTATTCCACTTTTTTTTGAAAGTGGGAGCCACTTGGGCCAGATTTTTT GCTATGTTTATGGGATTTGAATTTGAAATCCAAAAACCAAACTTCCTGGTGTCAATTTGTAAACGTACTTATGCATTAGT CATTTTGATTTTACTCTCACCGCTCAAACTGCTTAGTATCAAAATCTTTTCAGCGATCCATAAAGCATTGGGTGGAAGGA TTCGGATTTGTATCTCTGCTGGTTCTGCCTTACCAAGTGTTGTCGATGGATTTTTATCGGCCATTGGACTCAAAGTATTG GAAGGTTATGGGATGACAGAGACTTCTGCGGTTGTTTCCATTCGTTCCAATACCAAACCAACAAAAGGAACAGTGGGAAT CCCAATTGATGGGTATTCAATTCGTTTAAAAGACGAAACTGGTAAAGTGCTCACCAAAATCGGAGAAAAGGGCACTTTAT GGATCAAATCGAAACAAATTTTAAAAGGTTATTATAAGAGACCCGAACTCAACCAAGTTGTATTTGATGCGGATGGATTT TTTGATACGGGAGATCTCATGATGATCTCTCATCGAAATGAACTTGTGTTTGCTGGAAGGTCAAAAGATACAATTGCTCT CATCGGTGGTGAAAACGTTGAACCAATCCCAATTGAGGACAAACTATTAACATCACCTTATATTGACCAGGTGATGGTTG TAGGTCATGATAAAAAAACTTTGGCAGCATTGATTGTACCAAATTTTGAAGCTGTGGAATCAAAAATTCAAGGAATCTTA AAAGAGAAAGCAATCGAATGGAATACAAATCCGAAGGTGAGAGAATTGTTCCGATCCGAAATTTCAAAAATCATTTCACG CGATAATGGTTTCAAATCTTTTGAAATGATTCCTGCAAACAATTTTTATGTGGTTCCACGGCCATTTGACCCAGATGTCG AAATGACTCGCACTCTTAAAATGAAGAGAAACATCATCTCTGATGTATTTTCAAAACAAATCGAAGGAATTTACCAATGA
Upstream 100 bases:
>100_bases TGCCCTACCTTTCTGAAAAGTTTGTCAAAAATAAGAAAAAACTTGCAAAAAACGAACAGTGGTTTTTTATCCATTCTACA TTTCCTGTAAAAAGAACCAA
Downstream 100 bases:
>100_bases TCAATCCAAAACTAAATCCTTATCTAAATGATGAGGAACGAAGTTTTTACAATACAGTGTTTCAATTTTCAGAAGAAAAA GTGTATCCTACTTCTGAAGA
Product: long-chain acyl-CoA synthetase
Products: NA
Alternate protein names: Long-chain acyl-CoA synthetase; LACS [H]
Number of amino acids: Translated: 639; Mature: 639
Protein sequence:
>639_residues MKRQEPMNENYQILYQALERVATSFPNKVSFRKRKSATEFPGISFGELKEFVDHLTLGFIELGVEVGDRIGFFCDASVNW LRTDLSILTAGAVVVPRGTDIVREEILYILNHSEAKYLVVQKPKDKKRIEDLLGELPHLKQIFVLENEQGELISGPDSIL FLVERGKSIGKSSGLLNLTNRIKQIDPDALATLIYTSGTTGNPKGVMLSQKGWITAIQNTIVRLDMNSNDNAVSLLPPWH AFERAIEYAGIFLGLDFLISNMTSLKDDLRDFRPTIFPSVPRIWESVYNGIMAKVAKEGGFKEKLFHFFLKVGATWARFF AMFMGFEFEIQKPNFLVSICKRTYALVILILLSPLKLLSIKIFSAIHKALGGRIRICISAGSALPSVVDGFLSAIGLKVL EGYGMTETSAVVSIRSNTKPTKGTVGIPIDGYSIRLKDETGKVLTKIGEKGTLWIKSKQILKGYYKRPELNQVVFDADGF FDTGDLMMISHRNELVFAGRSKDTIALIGGENVEPIPIEDKLLTSPYIDQVMVVGHDKKTLAALIVPNFEAVESKIQGIL KEKAIEWNTNPKVRELFRSEISKIISRDNGFKSFEMIPANNFYVVPRPFDPDVEMTRTLKMKRNIISDVFSKQIEGIYQ
Sequences:
>Translated_639_residues MKRQEPMNENYQILYQALERVATSFPNKVSFRKRKSATEFPGISFGELKEFVDHLTLGFIELGVEVGDRIGFFCDASVNW LRTDLSILTAGAVVVPRGTDIVREEILYILNHSEAKYLVVQKPKDKKRIEDLLGELPHLKQIFVLENEQGELISGPDSIL FLVERGKSIGKSSGLLNLTNRIKQIDPDALATLIYTSGTTGNPKGVMLSQKGWITAIQNTIVRLDMNSNDNAVSLLPPWH AFERAIEYAGIFLGLDFLISNMTSLKDDLRDFRPTIFPSVPRIWESVYNGIMAKVAKEGGFKEKLFHFFLKVGATWARFF AMFMGFEFEIQKPNFLVSICKRTYALVILILLSPLKLLSIKIFSAIHKALGGRIRICISAGSALPSVVDGFLSAIGLKVL EGYGMTETSAVVSIRSNTKPTKGTVGIPIDGYSIRLKDETGKVLTKIGEKGTLWIKSKQILKGYYKRPELNQVVFDADGF FDTGDLMMISHRNELVFAGRSKDTIALIGGENVEPIPIEDKLLTSPYIDQVMVVGHDKKTLAALIVPNFEAVESKIQGIL KEKAIEWNTNPKVRELFRSEISKIISRDNGFKSFEMIPANNFYVVPRPFDPDVEMTRTLKMKRNIISDVFSKQIEGIYQ >Mature_639_residues MKRQEPMNENYQILYQALERVATSFPNKVSFRKRKSATEFPGISFGELKEFVDHLTLGFIELGVEVGDRIGFFCDASVNW LRTDLSILTAGAVVVPRGTDIVREEILYILNHSEAKYLVVQKPKDKKRIEDLLGELPHLKQIFVLENEQGELISGPDSIL FLVERGKSIGKSSGLLNLTNRIKQIDPDALATLIYTSGTTGNPKGVMLSQKGWITAIQNTIVRLDMNSNDNAVSLLPPWH AFERAIEYAGIFLGLDFLISNMTSLKDDLRDFRPTIFPSVPRIWESVYNGIMAKVAKEGGFKEKLFHFFLKVGATWARFF AMFMGFEFEIQKPNFLVSICKRTYALVILILLSPLKLLSIKIFSAIHKALGGRIRICISAGSALPSVVDGFLSAIGLKVL EGYGMTETSAVVSIRSNTKPTKGTVGIPIDGYSIRLKDETGKVLTKIGEKGTLWIKSKQILKGYYKRPELNQVVFDADGF FDTGDLMMISHRNELVFAGRSKDTIALIGGENVEPIPIEDKLLTSPYIDQVMVVGHDKKTLAALIVPNFEAVESKIQGIL KEKAIEWNTNPKVRELFRSEISKIISRDNGFKSFEMIPANNFYVVPRPFDPDVEMTRTLKMKRNIISDVFSKQIEGIYQ
Specific function: Esterification, Concomitant With Transport, Of Exogenous Long-Chain Fatty Acids Into Metabolically Active CoA Thioesters For Subsequent Degradation Or Incorporation Into Phospholipids. [C]
COG id: COG1022
COG function: function code I; Long-chain acyl-CoA synthetases (AMP-forming)
Gene ontology:
Cell location: Partially Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI40807491, Length=656, Percent_Identity=27.2865853658537, Blast_Score=192, Evalue=7e-49, Organism=Homo sapiens, GI42794756, Length=652, Percent_Identity=25.4601226993865, Blast_Score=190, Evalue=4e-48, Organism=Homo sapiens, GI42794760, Length=652, Percent_Identity=25.4601226993865, Blast_Score=189, Evalue=6e-48, Organism=Homo sapiens, GI42794758, Length=652, Percent_Identity=25.4601226993865, Blast_Score=189, Evalue=6e-48, Organism=Homo sapiens, GI57165412, Length=659, Percent_Identity=25.7966616084977, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI57165410, Length=657, Percent_Identity=25.8751902587519, Blast_Score=176, Evalue=5e-44, Organism=Homo sapiens, GI12669909, Length=624, Percent_Identity=23.7179487179487, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI4758332, Length=624, Percent_Identity=23.7179487179487, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI27477105, Length=664, Percent_Identity=23.4939759036145, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI42794754, Length=608, Percent_Identity=22.6973684210526, Blast_Score=136, Evalue=7e-32, Organism=Homo sapiens, GI42794752, Length=608, Percent_Identity=22.6973684210526, Blast_Score=136, Evalue=7e-32, Organism=Homo sapiens, GI83745141, Length=649, Percent_Identity=23.8828967642527, Blast_Score=127, Evalue=4e-29, Organism=Homo sapiens, GI187761345, Length=368, Percent_Identity=23.0978260869565, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI187761343, Length=368, Percent_Identity=23.0978260869565, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI156151445, Length=162, Percent_Identity=29.6296296296296, Blast_Score=70, Evalue=5e-12, Organism=Escherichia coli, GI1788107, Length=177, Percent_Identity=29.9435028248588, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI145693145, Length=170, Percent_Identity=30.5882352941176, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI221142682, Length=154, Percent_Identity=32.4675324675325, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1786810, Length=181, Percent_Identity=29.8342541436464, Blast_Score=66, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17510401, Length=649, Percent_Identity=28.1972265023112, Blast_Score=186, Evalue=3e-47, Organism=Caenorhabditis elegans, GI17556552, Length=578, Percent_Identity=25.4325259515571, Blast_Score=162, Evalue=6e-40, Organism=Caenorhabditis elegans, GI17541856, Length=637, Percent_Identity=25.74568288854, Blast_Score=156, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17553312, Length=633, Percent_Identity=25.1184834123223, Blast_Score=155, Evalue=6e-38, Organism=Caenorhabditis elegans, GI17564090, Length=555, Percent_Identity=25.7657657657658, Blast_Score=146, Evalue=3e-35, Organism=Caenorhabditis elegans, GI193204819, Length=659, Percent_Identity=24.886191198786, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI25147511, Length=632, Percent_Identity=23.5759493670886, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI32563687, Length=292, Percent_Identity=27.0547945205479, Blast_Score=96, Evalue=9e-20, Organism=Caenorhabditis elegans, GI17531443, Length=533, Percent_Identity=22.5140712945591, Blast_Score=95, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17558820, Length=272, Percent_Identity=30.1470588235294, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17538037, Length=153, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17557194, Length=141, Percent_Identity=32.6241134751773, Blast_Score=71, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323903, Length=549, Percent_Identity=24.7723132969035, Blast_Score=130, Evalue=9e-31, Organism=Saccharomyces cerevisiae, GI6320852, Length=605, Percent_Identity=28.9256198347107, Blast_Score=123, Evalue=8e-29, Organism=Saccharomyces cerevisiae, GI6324893, Length=642, Percent_Identity=21.8068535825545, Blast_Score=119, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6322182, Length=541, Percent_Identity=22.181146025878, Blast_Score=116, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6319699, Length=351, Percent_Identity=24.7863247863248, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24666501, Length=655, Percent_Identity=25.6488549618321, Blast_Score=192, Evalue=7e-49, Organism=Drosophila melanogaster, GI24666497, Length=655, Percent_Identity=25.6488549618321, Blast_Score=192, Evalue=7e-49, Organism=Drosophila melanogaster, GI281366413, Length=655, Percent_Identity=25.6488549618321, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI17933690, Length=648, Percent_Identity=22.9938271604938, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI62471689, Length=473, Percent_Identity=27.6955602536998, Blast_Score=150, Evalue=4e-36, Organism=Drosophila melanogaster, GI62471681, Length=473, Percent_Identity=27.6955602536998, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI62471687, Length=473, Percent_Identity=27.6955602536998, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI24586634, Length=473, Percent_Identity=27.6955602536998, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI22026970, Length=473, Percent_Identity=27.6955602536998, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI62471679, Length=473, Percent_Identity=27.6955602536998, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI62471683, Length=473, Percent_Identity=27.6955602536998, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI62471685, Length=473, Percent_Identity=27.6955602536998, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI24586636, Length=473, Percent_Identity=27.6955602536998, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI19921316, Length=646, Percent_Identity=22.1362229102167, Blast_Score=131, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.3 [H]
Molecular weight: Translated: 71695; Mature: 71695
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRQEPMNENYQILYQALERVATSFPNKVSFRKRKSATEFPGISFGELKEFVDHLTLGFI CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH ELGVEVGDRIGFFCDASVNWLRTDLSILTAGAVVVPRGTDIVREEILYILNHSEAKYLVV HHHHHHHCCCCEEECCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHCCCCCCEEEEE QKPKDKKRIEDLLGELPHLKQIFVLENEQGELISGPDSILFLVERGKSIGKSSGLLNLTN ECCCHHHHHHHHHHCCCCCEEEEEEECCCCCEECCCCCEEEEEECCCCCCCCCCEEHHHH RIKQIDPDALATLIYTSGTTGNPKGVMLSQKGWITAIQNTIVRLDMNSNDNAVSLLPPWH HHHHCCHHHHEEEEEECCCCCCCCCEEEECCCCCEEECCEEEEEEECCCCCEEEECCCHH AFERAIEYAGIFLGLDFLISNMTSLKDDLRDFRPTIFPSVPRIWESVYNGIMAKVAKEGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC FKEKLFHFFLKVGATWARFFAMFMGFEFEIQKPNFLVSICKRTYALVILILLSPLKLLSI HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KIFSAIHKALGGRIRICISAGSALPSVVDGFLSAIGLKVLEGYGMTETSAVVSIRSNTKP HHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC TKGTVGIPIDGYSIRLKDETGKVLTKIGEKGTLWIKSKQILKGYYKRPELNQVVFDADGF CCCEEEEEECCEEEEEECCCHHHHHHCCCCCEEEEECHHHHHHHHCCCCCCEEEEECCCC FDTGDLMMISHRNELVFAGRSKDTIALIGGENVEPIPIEDKLLTSPYIDQVMVVGHDKKT CCCCCEEEEECCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCE LAALIVPNFEAVESKIQGILKEKAIEWNTNPKVRELFRSEISKIISRDNGFKSFEMIPAN EEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCC NFYVVPRPFDPDVEMTRTLKMKRNIISDVFSKQIEGIYQ CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRQEPMNENYQILYQALERVATSFPNKVSFRKRKSATEFPGISFGELKEFVDHLTLGFI CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH ELGVEVGDRIGFFCDASVNWLRTDLSILTAGAVVVPRGTDIVREEILYILNHSEAKYLVV HHHHHHHCCCCEEECCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHCCCCCCEEEEE QKPKDKKRIEDLLGELPHLKQIFVLENEQGELISGPDSILFLVERGKSIGKSSGLLNLTN ECCCHHHHHHHHHHCCCCCEEEEEEECCCCCEECCCCCEEEEEECCCCCCCCCCEEHHHH RIKQIDPDALATLIYTSGTTGNPKGVMLSQKGWITAIQNTIVRLDMNSNDNAVSLLPPWH HHHHCCHHHHEEEEEECCCCCCCCCEEEECCCCCEEECCEEEEEEECCCCCEEEECCCHH AFERAIEYAGIFLGLDFLISNMTSLKDDLRDFRPTIFPSVPRIWESVYNGIMAKVAKEGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC FKEKLFHFFLKVGATWARFFAMFMGFEFEIQKPNFLVSICKRTYALVILILLSPLKLLSI HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KIFSAIHKALGGRIRICISAGSALPSVVDGFLSAIGLKVLEGYGMTETSAVVSIRSNTKP HHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC TKGTVGIPIDGYSIRLKDETGKVLTKIGEKGTLWIKSKQILKGYYKRPELNQVVFDADGF CCCEEEEEECCEEEEEECCCHHHHHHCCCCCEEEEECHHHHHHHHCCCCCCEEEEECCCC FDTGDLMMISHRNELVFAGRSKDTIALIGGENVEPIPIEDKLLTSPYIDQVMVVGHDKKT CCCCCEEEEECCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCE LAALIVPNFEAVESKIQGILKEKAIEWNTNPKVRELFRSEISKIISRDNGFKSFEMIPAN EEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCC NFYVVPRPFDPDVEMTRTLKMKRNIISDVFSKQIEGIYQ CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]