Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220503
Identifier: 183220503
GI number: 183220503
Start: 1149196
End: 1149768
Strand: Direct
Name: 183220503
Synonym: LEPBI_I1104
Alternate gene names: NA
Gene position: 1149196-1149768 (Clockwise)
Preceding gene: 183220502
Following gene: 183220510
Centisome position: 31.92
GC content: 34.55
Gene sequence:
>573_bases TTGAGTTTGAAACCAAAAGAAAAGATTTTAGAAAGTTCATTTGCATTGTTTAGGGAAAAAGGTTTCCAGGCGACCGGCAT TGCCGAAATTTTAGAACGAGCAGGTGCTTATAAAAAAACCCTTTATGATCATTTTAAATCCAAAGATGATATTGGATTTG AGTATTTAAATTATTTATCGGAACAACAACGTATCGTGATGCTTAAGGTTCTTGGAAAAGCGAATGACCTATCTGATTTT ATCGAAAAATGGGTTAATTTTATCGTACGGAACCAAAGGAATACTTCTCGGAAAGATTGTCCCATAGCTTTGTTCTCAGG TGAGATTTCACACTTAAACCAATTTGATACGTATAGAAATCGAGCTGTACAACACGTATTAGAAACGGTTGAATTTTGTA TTTTAAAGTTCGAACCTAACCTTCGTTCTGATCTTGTCAAATCACTGAGTTATGAATTGTATATGAGTTACTTGGGCGGT TTACGTTTGTATGCTTTAACCAAAGATCGTAAAGTGATTGAACGTATGAAATCTCAAATGATCCATTCCGCACAAAGATT GATCAAAGCCTAA
Upstream 100 bases:
>100_bases AAATCTACCATTCATGATAAAGAAGGGAATTCTGTTTTGGAATATGACCCTTCCCAAGAAACAGTTTCCAATCAATCAAA GGGAATCGAATAGGAGAGTT
Downstream 100 bases:
>100_bases AAATTCGTTTACCAACTACCGCTCGCACCTCCACCTCCTGACCTTCCCCCTCCTCCTGAATAGGAGCTACTTGAAGATCG GTAACTAGAACCGGAGTTAG
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSLKPKEKILESSFALFREKGFQATGIAEILERAGAYKKTLYDHFKSKDDIGFEYLNYLSEQQRIVMLKVLGKANDLSDF IEKWVNFIVRNQRNTSRKDCPIALFSGEISHLNQFDTYRNRAVQHVLETVEFCILKFEPNLRSDLVKSLSYELYMSYLGG LRLYALTKDRKVIERMKSQMIHSAQRLIKA
Sequences:
>Translated_190_residues MSLKPKEKILESSFALFREKGFQATGIAEILERAGAYKKTLYDHFKSKDDIGFEYLNYLSEQQRIVMLKVLGKANDLSDF IEKWVNFIVRNQRNTSRKDCPIALFSGEISHLNQFDTYRNRAVQHVLETVEFCILKFEPNLRSDLVKSLSYELYMSYLGG LRLYALTKDRKVIERMKSQMIHSAQRLIKA >Mature_189_residues SLKPKEKILESSFALFREKGFQATGIAEILERAGAYKKTLYDHFKSKDDIGFEYLNYLSEQQRIVMLKVLGKANDLSDFI EKWVNFIVRNQRNTSRKDCPIALFSGEISHLNQFDTYRNRAVQHVLETVEFCILKFEPNLRSDLVKSLSYELYMSYLGGL RLYALTKDRKVIERMKSQMIHSAQRLIKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22230; Mature: 22099
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKPKEKILESSFALFREKGFQATGIAEILERAGAYKKTLYDHFKSKDDIGFEYLNYLS CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHH EQQRIVMLKVLGKANDLSDFIEKWVNFIVRNQRNTSRKDCPIALFSGEISHLNQFDTYRN HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHH RAVQHVLETVEFCILKFEPNLRSDLVKSLSYELYMSYLGGLRLYALTKDRKVIERMKSQM HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHEEEECHHHHHHHHHHHHH IHSAQRLIKA HHHHHHHHCC >Mature Secondary Structure SLKPKEKILESSFALFREKGFQATGIAEILERAGAYKKTLYDHFKSKDDIGFEYLNYLS CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHH EQQRIVMLKVLGKANDLSDFIEKWVNFIVRNQRNTSRKDCPIALFSGEISHLNQFDTYRN HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHH RAVQHVLETVEFCILKFEPNLRSDLVKSLSYELYMSYLGGLRLYALTKDRKVIERMKSQM HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHEEEECHHHHHHHHHHHHH IHSAQRLIKA HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA