Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220487
Identifier: 183220487
GI number: 183220487
Start: 1136191
End: 1137099
Strand: Direct
Name: 183220487
Synonym: LEPBI_I1086
Alternate gene names: NA
Gene position: 1136191-1137099 (Clockwise)
Preceding gene: 183220486
Following gene: 183220488
Centisome position: 31.56
GC content: 36.96
Gene sequence:
>909_bases ATGAAAACAAACTTAATTCTAATCTACTTTGTATTTCTTGTGACAAACATAAGTATGGCGGAACCTGCGGGCAAAAAAGA GGATAAAGGTACAATCAACCAACAAACACAGCAAAATGAAGACAAAAAAATAGATGATGCAGAAGTGGAAAAATACTACG CAAAATTAAAATACCCACCAGGATTTTACCAAGGTGCATTTTTGATAAGCTTTATGGGTGGTGGAAGTTTAGCTCCAAGT GGATCGTTCATTAGTCATGAAAAAAATTATGATAGTGCCTTACAATACCGAGTTGTTACGAAAGAAGTCAGTCAAGATTA TTATCCCCAAGGTGTGGTACGAAACCAAGATCCTGGTCTCTATTTCAAACCTACTTATACGCCAGGTGTCGCTTCCCAGT TCGATTTTGAATATGGATGGAAGGAAAAAATTGGCCTTGGTTTTACTGTAATGCAAAATTCTTTGAAGGCGAAAAGGCAA GATATCATTCCTGGTTTATCGTATTATAAAGAATATGTGGATCCTTTCCCAAGGGAACGCACTATTTATCGAGGTAACTC GATGAGTTTTCTTGCGACCTATCATCCTATACCGAGGAATTTTTTTGATCCATATCTTGTGGTCAGAGCAGGAGTTGTTT CATTTACAGGAGAAGCACATGCAGGCTTAAACCATGATAAATTTGTTTATAGTAACCAGATATCGAGTGGAATTGGTAGT ATCGTTGGAGTTGGCGGTGGTTTGAATATTTATTTGGGTCGATACTTCGGTATCAAAGCGGAAGTCGATTACTACCGGGA ATTTTTAAAAGCGGATCAATTTTCCATGCGAACCTTAAACTCATACCAAGCTATGATTGGAGTTTTTGTGAATTTATCAA ATGTTCAATACCGATTAGAACAATATTAA
Upstream 100 bases:
>100_bases ATGGATTGAATTGGTGCCATTCGCACCTTAGAAGTGCATCCTGCACTTTTTTTTTGGTAATTCTTTTGATTGTCTCTATT CTTCATAGAGGGATAATCAA
Downstream 100 bases:
>100_bases TACGAGGATTTTTTTGAAAATATTAATTGTAGAAGACGAGGAAGTAGCCGCAAGGGGTCTAGAGCGCTTGTTACGTGAAC TTTTGGGTAAAAAAATCTCG
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MKTNLILIYFVFLVTNISMAEPAGKKEDKGTINQQTQQNEDKKIDDAEVEKYYAKLKYPPGFYQGAFLISFMGGGSLAPS GSFISHEKNYDSALQYRVVTKEVSQDYYPQGVVRNQDPGLYFKPTYTPGVASQFDFEYGWKEKIGLGFTVMQNSLKAKRQ DIIPGLSYYKEYVDPFPRERTIYRGNSMSFLATYHPIPRNFFDPYLVVRAGVVSFTGEAHAGLNHDKFVYSNQISSGIGS IVGVGGGLNIYLGRYFGIKAEVDYYREFLKADQFSMRTLNSYQAMIGVFVNLSNVQYRLEQY
Sequences:
>Translated_302_residues MKTNLILIYFVFLVTNISMAEPAGKKEDKGTINQQTQQNEDKKIDDAEVEKYYAKLKYPPGFYQGAFLISFMGGGSLAPS GSFISHEKNYDSALQYRVVTKEVSQDYYPQGVVRNQDPGLYFKPTYTPGVASQFDFEYGWKEKIGLGFTVMQNSLKAKRQ DIIPGLSYYKEYVDPFPRERTIYRGNSMSFLATYHPIPRNFFDPYLVVRAGVVSFTGEAHAGLNHDKFVYSNQISSGIGS IVGVGGGLNIYLGRYFGIKAEVDYYREFLKADQFSMRTLNSYQAMIGVFVNLSNVQYRLEQY >Mature_302_residues MKTNLILIYFVFLVTNISMAEPAGKKEDKGTINQQTQQNEDKKIDDAEVEKYYAKLKYPPGFYQGAFLISFMGGGSLAPS GSFISHEKNYDSALQYRVVTKEVSQDYYPQGVVRNQDPGLYFKPTYTPGVASQFDFEYGWKEKIGLGFTVMQNSLKAKRQ DIIPGLSYYKEYVDPFPRERTIYRGNSMSFLATYHPIPRNFFDPYLVVRAGVVSFTGEAHAGLNHDKFVYSNQISSGIGS IVGVGGGLNIYLGRYFGIKAEVDYYREFLKADQFSMRTLNSYQAMIGVFVNLSNVQYRLEQY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34350; Mature: 34350
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNLILIYFVFLVTNISMAEPAGKKEDKGTINQQTQQNEDKKIDDAEVEKYYAKLKYPP CCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCC GFYQGAFLISFMGGGSLAPSGSFISHEKNYDSALQYRVVTKEVSQDYYPQGVVRNQDPGL CCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCE YFKPTYTPGVASQFDFEYGWKEKIGLGFTVMQNSLKAKRQDIIPGLSYYKEYVDPFPRER EECCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC TIYRGNSMSFLATYHPIPRNFFDPYLVVRAGVVSFTGEAHAGLNHDKFVYSNQISSGIGS EEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCEEEHHHHHHHHHH IVGVGGGLNIYLGRYFGIKAEVDYYREFLKADQFSMRTLNSYQAMIGVFVNLSNVQYRLE HEECCCCCEEEEEEEECEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCEEEEC QY CC >Mature Secondary Structure MKTNLILIYFVFLVTNISMAEPAGKKEDKGTINQQTQQNEDKKIDDAEVEKYYAKLKYPP CCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCC GFYQGAFLISFMGGGSLAPSGSFISHEKNYDSALQYRVVTKEVSQDYYPQGVVRNQDPGL CCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCE YFKPTYTPGVASQFDFEYGWKEKIGLGFTVMQNSLKAKRQDIIPGLSYYKEYVDPFPRER EECCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC TIYRGNSMSFLATYHPIPRNFFDPYLVVRAGVVSFTGEAHAGLNHDKFVYSNQISSGIGS EEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCEEEHHHHHHHHHH IVGVGGGLNIYLGRYFGIKAEVDYYREFLKADQFSMRTLNSYQAMIGVFVNLSNVQYRLE HEECCCCCEEEEEEEECEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCEEEEC QY CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA